RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
HIF3A-205ENST00000377670 A0A087WSZ3 146 aa7.49□□□□□ -1.21
HIF3A-205ENST00000377670 CXCL6P80162 114 aa7.49□□□□□ -1.21
HIF3A-205ENST00000377670 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
HIF3A-205ENST00000377670 TEX15Q9BXT5 2789 aa7.48□□□□□ -1.21
HIF3A-205ENST00000377670 DCHS1Q96JQ0 3298 aa7.48□□□□□ -1.21
HIF3A-205ENST00000377670 SMIM29Q86T20 159 aa7.47□□□□□ -1.21
HIF3A-205ENST00000377670 DMDP11532 3685 aa7.47□□□□□ -1.21
HIF3A-205ENST00000377670 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
HIF3A-205ENST00000377670 C11orf72Q8NBR9 251 aa7.47□□□□□ -1.21
HIF3A-205ENST00000377670 SPINK1P00995 79 aa7.46□□□□□ -1.22
HIF3A-205ENST00000377670 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
HIF3A-205ENST00000377670 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
HIF3A-205ENST00000377670 hDV103S1A0JD37 113 aa7.45□□□□□ -1.22
HIF3A-205ENST00000377670 RPS28P62857 69 aaKnown RBP7.45□□□□□ -1.22
HIF3A-205ENST00000377670 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
HIF3A-205ENST00000377670 LAMA5O15230 3695 aa7.44□□□□□ -1.22
HIF3A-205ENST00000377670 C1orf64Q8NEQ6 169 aa7.44□□□□□ -1.22
HIF3A-205ENST00000377670 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
HIF3A-205ENST00000377670 MOBPQ13875 183 aa7.42□□□□□ -1.22
HIF3A-205ENST00000377670 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
HIF3A-205ENST00000377670 KRTAP10-11P60412 298 aa7.42□□□□□ -1.22
HIF3A-205ENST00000377670 SETXQ7Z333 2677 aaKnown RBP7.41□□□□□ -1.22
HIF3A-205ENST00000377670 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
HIF3A-205ENST00000377670 Q8NAQ8 132 aa7.41□□□□□ -1.22
HIF3A-205ENST00000377670 A0A096LNT2 108 aa7.4□□□□□ -1.22
HIF3A-205ENST00000377670 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.23
HIF3A-205ENST00000377670 CHTF8P0CG12 524 aa7.4□□□□□ -1.23
HIF3A-205ENST00000377670 KIAA0087Q14695 138 aa7.39□□□□□ -1.23
HIF3A-205ENST00000377670 ATP11AUNQ6ZP68 121 aa7.39□□□□□ -1.23
HIF3A-205ENST00000377670 PHF5AQ7RTV0 110 aaKnown RBP7.39□□□□□ -1.23
HIF3A-205ENST00000377670 ITPR1Q14643 2758 aa7.39□□□□□ -1.23
HIF3A-205ENST00000377670 RELNP78509 3460 aa7.39□□□□□ -1.23
HIF3A-205ENST00000377670 GCN1Q92616 2671 aaKnown RBP7.38□□□□□ -1.23
HIF3A-205ENST00000377670 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
HIF3A-205ENST00000377670 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
HIF3A-205ENST00000377670 BCE1O60756 84 aa7.37□□□□□ -1.23
HIF3A-205ENST00000377670 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
HIF3A-205ENST00000377670 IGKV2D-30A0A075B6S6 120 aa7.36□□□□□ -1.23
HIF3A-205ENST00000377670 IGKV2-30P06310 120 aa7.36□□□□□ -1.23
HIF3A-205ENST00000377670 TM2D3Q9BRN9 247 aa7.36□□□□□ -1.23
HIF3A-205ENST00000377670 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
HIF3A-205ENST00000377670 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
HIF3A-205ENST00000377670 Q6ZQT0 140 aa7.35□□□□□ -1.23
HIF3A-205ENST00000377670 IGHV3OR16-9A0A0B4J2B5 98 aa7.34□□□□□ -1.23
HIF3A-205ENST00000377670 A0A1B0GU69 56 aa7.34□□□□□ -1.23
HIF3A-205ENST00000377670 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
HIF3A-205ENST00000377670 UNC79Q9P2D8 2635 aa7.34□□□□□ -1.23
HIF3A-205ENST00000377670 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
HIF3A-205ENST00000377670 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
HIF3A-205ENST00000377670 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
HIF3A-205ENST00000377670 ZFHX4Q86UP3 3567 aa7.33□□□□□ -1.24
HIF3A-205ENST00000377670 STAB1Q9NY15 2570 aa7.33□□□□□ -1.24
HIF3A-205ENST00000377670 NBEAL2Q6ZNJ1 2754 aa7.32□□□□□ -1.24
HIF3A-205ENST00000377670 IGLV5-45A0A087WSX0 123 aa7.32□□□□□ -1.24
HIF3A-205ENST00000377670 Q8NBF4 154 aa7.32□□□□□ -1.24
HIF3A-205ENST00000377670 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
HIF3A-205ENST00000377670 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
HIF3A-205ENST00000377670 LOC110117498A0A087WWA1 95 aa7.3□□□□□ -1.24
HIF3A-205ENST00000377670 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
HIF3A-205ENST00000377670 CRYBG3Q68DQ2 2970 aa7.3□□□□□ -1.24
HIF3A-205ENST00000377670 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
HIF3A-205ENST00000377670 ELOF1P60002 83 aaKnown RBP7.29□□□□□ -1.24
HIF3A-205ENST00000377670 ASH1LQ9NR48 2969 aaKnown RBP7.28□□□□□ -1.24
HIF3A-205ENST00000377670 KLK9Q2XQG4 91 aa7.28□□□□□ -1.24
HIF3A-205ENST00000377670 A0A087WTM6 91 aa7.27□□□□□ -1.24
HIF3A-205ENST00000377670 ACYP2P14621 99 aa7.27□□□□□ -1.24
HIF3A-205ENST00000377670 ITPR2Q14571 2701 aa7.27□□□□□ -1.24
HIF3A-205ENST00000377670 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.24
HIF3A-205ENST00000377670 LITAFQ99732 161 aa7.27□□□□□ -1.25
HIF3A-205ENST00000377670 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
HIF3A-205ENST00000377670 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
HIF3A-205ENST00000377670 Q96NJ1 140 aa7.26□□□□□ -1.25
HIF3A-205ENST00000377670 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
HIF3A-205ENST00000377670 KRTAP1-1Q07627 177 aa7.26□□□□□ -1.25
HIF3A-205ENST00000377670 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
HIF3A-205ENST00000377670 LINC00313P59037 77 aa7.25□□□□□ -1.25
HIF3A-205ENST00000377670 GVQW2A0A096LPI5 108 aaPredicted RBP7.24□□□□□ -1.25
HIF3A-205ENST00000377670 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
HIF3A-205ENST00000377670 LINC00476Q8WZB0 136 aa7.24□□□□□ -1.25
HIF3A-205ENST00000377670 NBEAL1Q6ZS30 2694 aa7.24□□□□□ -1.25
HIF3A-205ENST00000377670 A8MUN3 132 aa7.24□□□□□ -1.25
HIF3A-205ENST00000377670 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
HIF3A-205ENST00000377670 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
HIF3A-205ENST00000377670 GIG44P09565 113 aaPredicted RBP7.23□□□□□ -1.25
HIF3A-205ENST00000377670 H3BPC8 53 aa7.22□□□□□ -1.25
HIF3A-205ENST00000377670 CSNK1G2-AS1Q8NCQ2 148 aa7.22□□□□□ -1.25
HIF3A-205ENST00000377670 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
HIF3A-205ENST00000377670 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
HIF3A-205ENST00000377670 A0A1B0GW54 56 aa7.21□□□□□ -1.25
HIF3A-205ENST00000377670 BAHCC1Q9P281 2608 aa7.21□□□□□ -1.26
HIF3A-205ENST00000377670 VPREB1P12018 145 aa7.21□□□□□ -1.26
HIF3A-205ENST00000377670 APLNQ9ULZ1 77 aa7.21□□□□□ -1.26
HIF3A-205ENST00000377670 Q6ZRX8 168 aa7.2□□□□□ -1.26
HIF3A-205ENST00000377670 CR1P17927 2039 aa7.19□□□□□ -1.26
HIF3A-205ENST00000377670 TRBV7-4A0A0J9YYF1 115 aa7.18□□□□□ -1.26
HIF3A-205ENST00000377670 K7EQZ3 153 aa7.17□□□□□ -1.26
HIF3A-205ENST00000377670 COA5Q86WW8 74 aa7.17□□□□□ -1.26
HIF3A-205ENST00000377670 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
HIF3A-205ENST00000377670 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms