RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
FXN-201ENST00000377270 C9orf66Q5T8R8 295 aa10.47□□□□□ -0.73
FXN-201ENST00000377270 X6R8D5 127 aa10.47□□□□□ -0.73
FXN-201ENST00000377270 PRR4Q16378 134 aa10.47□□□□□ -0.73
FXN-201ENST00000377270 GYPEP15421 78 aa10.46□□□□□ -0.74
FXN-201ENST00000377270 LINC00612Q8N6U2 182 aa10.46□□□□□ -0.74
FXN-201ENST00000377270 NKAPP1Q8N9T2 125 aa10.44□□□□□ -0.74
FXN-201ENST00000377270 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
FXN-201ENST00000377270 ATRQ13535 2644 aa10.43□□□□□ -0.74
FXN-201ENST00000377270 HIVEP1P15822 2718 aa10.42□□□□□ -0.74
FXN-201ENST00000377270 DEFB4AO15263 64 aa10.42□□□□□ -0.74
FXN-201ENST00000377270 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
FXN-201ENST00000377270 PRR15LQ9BU68 103 aa10.42□□□□□ -0.74
FXN-201ENST00000377270 A0A096LPF7 62 aa10.41□□□□□ -0.74
FXN-201ENST00000377270 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
FXN-201ENST00000377270 VPREB1P12018 145 aa10.41□□□□□ -0.74
FXN-201ENST00000377270 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
FXN-201ENST00000377270 CYP4F30PQ9H0H9 118 aa10.4□□□□□ -0.74
FXN-201ENST00000377270 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
FXN-201ENST00000377270 A6NED7 52 aa10.39□□□□□ -0.75
FXN-201ENST00000377270 C6orf99Q4VX62 202 aa10.39□□□□□ -0.75
FXN-201ENST00000377270 LINC00575Q6W349 94 aa10.39□□□□□ -0.75
FXN-201ENST00000377270 TEP1Q99973 2627 aaKnown RBP10.39□□□□□ -0.75
FXN-201ENST00000377270 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
FXN-201ENST00000377270 PDE6GP18545 87 aa10.38□□□□□ -0.75
FXN-201ENST00000377270 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
FXN-201ENST00000377270 CELA1Q9UNI1 258 aa10.38□□□□□ -0.75
FXN-201ENST00000377270 IGHV4-28A0A0C4DH34 117 aa10.37□□□□□ -0.75
FXN-201ENST00000377270 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
FXN-201ENST00000377270 LIMD2Q9BT23 127 aa10.37□□□□□ -0.75
FXN-201ENST00000377270 CLPSL2Q6UWE3 100 aa10.36□□□□□ -0.75
FXN-201ENST00000377270 Q8IZM0 81 aa10.36□□□□□ -0.75
FXN-201ENST00000377270 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
FXN-201ENST00000377270 A0A1B0GUV1 79 aa10.35□□□□□ -0.75
FXN-201ENST00000377270 MOBPQ13875 183 aa10.34□□□□□ -0.75
FXN-201ENST00000377270 ZCCHC13Q8WW36 166 aaKnown RBP10.34□□□□□ -0.75
FXN-201ENST00000377270 LCE6AA0A183 80 aa10.33□□□□□ -0.76
FXN-201ENST00000377270 LINC01554Q52M75 96 aa10.33□□□□□ -0.76
FXN-201ENST00000377270 CDC42SE1Q9NRR8 79 aa10.32□□□□□ -0.76
FXN-201ENST00000377270 Q75L30 129 aa10.32□□□□□ -0.76
FXN-201ENST00000377270 SMIM29Q86T20 159 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 PRAC1Q96KF2 57 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 LINC00313P59037 77 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 COX17Q14061 63 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 Q8NAQ8 132 aa10.31□□□□□ -0.76
FXN-201ENST00000377270 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
FXN-201ENST00000377270 IGHV4-30-4P0DP06 118 aa10.29□□□□□ -0.76
FXN-201ENST00000377270 H3BQ85 93 aa10.29□□□□□ -0.76
FXN-201ENST00000377270 HTN3P15516 51 aa10.29□□□□□ -0.76
FXN-201ENST00000377270 SPART-AS1P0CW21 52 aa10.28□□□□□ -0.76
FXN-201ENST00000377270 Q6ZQY7 126 aa10.28□□□□□ -0.76
FXN-201ENST00000377270 Q8NDZ9 215 aa10.28□□□□□ -0.76
FXN-201ENST00000377270 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.76
FXN-201ENST00000377270 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
FXN-201ENST00000377270 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
FXN-201ENST00000377270 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
FXN-201ENST00000377270 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.26□□□□□ -0.77
FXN-201ENST00000377270 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
FXN-201ENST00000377270 REG3AQ06141 175 aa10.24□□□□□ -0.77
FXN-201ENST00000377270 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
FXN-201ENST00000377270 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
FXN-201ENST00000377270 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
FXN-201ENST00000377270 F8P00451 2351 aa10.21□□□□□ -0.77
FXN-201ENST00000377270 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
FXN-201ENST00000377270 IGLV6-57P01721 117 aa10.2□□□□□ -0.78
FXN-201ENST00000377270 LELP1Q5T871 98 aa10.2□□□□□ -0.78
FXN-201ENST00000377270 ST20-AS1Q8NBB2 130 aa10.2□□□□□ -0.78
FXN-201ENST00000377270 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
FXN-201ENST00000377270 COX7BP24311 80 aa10.18□□□□□ -0.78
FXN-201ENST00000377270 FLNBO75369 2602 aaKnown RBP10.18□□□□□ -0.78
FXN-201ENST00000377270 ADM2Q7Z4H4 148 aa10.17□□□□□ -0.78
FXN-201ENST00000377270 ETDCA0A1B0GVM5 59 aa10.17□□□□□ -0.78
FXN-201ENST00000377270 KRTAP10-11P60412 298 aa10.17□□□□□ -0.78
FXN-201ENST00000377270 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
FXN-201ENST00000377270 NDUFB1O75438 58 aa10.16□□□□□ -0.78
FXN-201ENST00000377270 MP68P56378 58 aa10.15□□□□□ -0.78
FXN-201ENST00000377270 ELOF1P60002 83 aaKnown RBP10.15□□□□□ -0.78
FXN-201ENST00000377270 PRR34Q9NV39 138 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 STAB1Q9NY15 2570 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 KRTAP24-1Q3LI83 254 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 Q9BRP9 147 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 PKD1L1Q8TDX9 2849 aa10.12□□□□□ -0.79
FXN-201ENST00000377270 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
FXN-201ENST00000377270 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
FXN-201ENST00000377270 KPRPQ5T749 579 aaPredicted RBP10.1□□□□□ -0.79
FXN-201ENST00000377270 CYSRT1A8MQ03 144 aa10.08□□□□□ -0.8
FXN-201ENST00000377270 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
FXN-201ENST00000377270 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
FXN-201ENST00000377270 WFDC10BQ8IUB3 73 aa10.07□□□□□ -0.8
FXN-201ENST00000377270 ANK2Q01484 3957 aa10.07□□□□□ -0.8
FXN-201ENST00000377270 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
FXN-201ENST00000377270 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
FXN-201ENST00000377270 A0A0J9YWU9 116 aa10.06□□□□□ -0.8
FXN-201ENST00000377270 SPINK7P58062 85 aa10.06□□□□□ -0.8
FXN-201ENST00000377270 H3BNG1 76 aa10.05□□□□□ -0.8
FXN-201ENST00000377270 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
FXN-201ENST00000377270 MAST4O15021 2626 aa10.04□□□□□ -0.8
FXN-201ENST00000377270 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms