RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 Q8N377 158 aa5.3□□□□□ -1.56
C9orf85-202ENST00000377027 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
C9orf85-202ENST00000377027 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
C9orf85-202ENST00000377027 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
C9orf85-202ENST00000377027 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
C9orf85-202ENST00000377027 ZNF706Q9Y5V0 76 aaPredicted RBP5.29□□□□□ -1.56
C9orf85-202ENST00000377027 LOC107984156A0A0G2JMH3 177 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 ETDCA0A1B0GVM5 59 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 SPINK1P00995 79 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 MOBPQ13875 183 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 GAGE2AQ6NT46 116 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 ARL17AQ8IVW1 177 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 CHCHD1Q96BP2 118 aaKnown RBP5.28□□□□□ -1.56
C9orf85-202ENST00000377027 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 PAM16Q9Y3D7 125 aa5.28□□□□□ -1.56
C9orf85-202ENST00000377027 APOC3P02656 99 aa5.27□□□□□ -1.57
C9orf85-202ENST00000377027 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
C9orf85-202ENST00000377027 HERV-K104P63124 156 aa5.26□□□□□ -1.57
C9orf85-202ENST00000377027 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
C9orf85-202ENST00000377027 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
C9orf85-202ENST00000377027 DDTP30046 118 aa5.25□□□□□ -1.57
C9orf85-202ENST00000377027 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
C9orf85-202ENST00000377027 Q6ZRX8 168 aa5.25□□□□□ -1.57
C9orf85-202ENST00000377027 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
C9orf85-202ENST00000377027 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
C9orf85-202ENST00000377027 H0Y8G0 127 aa5.24□□□□□ -1.57
C9orf85-202ENST00000377027 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
C9orf85-202ENST00000377027 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
C9orf85-202ENST00000377027 TRBV10-2A0A0K0K1G8 114 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 LEPROTO15243 131 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 ATP6V1G1O75348 118 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 SNAPINO95295 136 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 SVBPQ8N300 66 aa5.23□□□□□ -1.57
C9orf85-202ENST00000377027 J3QQQ9 107 aa5.22□□□□□ -1.57
C9orf85-202ENST00000377027 HSBP1O75506 76 aa5.22□□□□□ -1.57
C9orf85-202ENST00000377027 SERF1AO75920 110 aa5.22□□□□□ -1.57
C9orf85-202ENST00000377027 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
C9orf85-202ENST00000377027 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
C9orf85-202ENST00000377027 PMCHL2Q9BQD1 86 aa5.22□□□□□ -1.57
C9orf85-202ENST00000377027 SPANXB1Q9NS25 103 aaPredicted RBP5.22□□□□□ -1.57
C9orf85-202ENST00000377027 TRGC2P03986 189 aa5.21□□□□□ -1.58
C9orf85-202ENST00000377027 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
C9orf85-202ENST00000377027 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
C9orf85-202ENST00000377027 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 LINC00587B1AMM8 73 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 SLC25A20O43772 301 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 NDUFC2O95298 119 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 NPC2P61916 151 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 MAP1LC3CQ9BXW4 147 aa5.2□□□□□ -1.58
C9orf85-202ENST00000377027 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
C9orf85-202ENST00000377027 LEPROTL1O95214 131 aa5.19□□□□□ -1.58
C9orf85-202ENST00000377027 S100A1P23297 94 aa5.19□□□□□ -1.58
C9orf85-202ENST00000377027 MT1HP80294 61 aa5.19□□□□□ -1.58
C9orf85-202ENST00000377027 LITAFQ99732 161 aa5.19□□□□□ -1.58
C9orf85-202ENST00000377027 ZNF73O43830 326 aaPredicted RBP5.18□□□□□ -1.58
C9orf85-202ENST00000377027 DPM2O94777 84 aa5.18□□□□□ -1.58
C9orf85-202ENST00000377027 PLNP26678 52 aa5.18□□□□□ -1.58
C9orf85-202ENST00000377027 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
C9orf85-202ENST00000377027 IGKCP01834 107 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 FABP4P15090 132 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 SPRR1BP22528 89 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 NMUP48645 174 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 NDUFA5Q16718 116 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 C9orf153Q5TBE3 101 aa5.17□□□□□ -1.58
C9orf85-202ENST00000377027 LGALS3P17931 250 aaKnown RBP5.16□□□□□ -1.58
C9orf85-202ENST00000377027 S100A7L2Q5SY68 101 aa5.16□□□□□ -1.58
C9orf85-202ENST00000377027 S100A12P80511 92 aa5.15□□□□□ -1.59
C9orf85-202ENST00000377027 PCOTHQ58A44 107 aa5.15□□□□□ -1.59
C9orf85-202ENST00000377027 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
C9orf85-202ENST00000377027 C9orf92A6NGG3 77 aa5.14□□□□□ -1.59
C9orf85-202ENST00000377027 E9PLD3 99 aa5.14□□□□□ -1.59
C9orf85-202ENST00000377027 HERVK_113P61574 105 aa5.14□□□□□ -1.59
C9orf85-202ENST00000377027 JOSD1Q15040 202 aaPredicted RBP5.14□□□□□ -1.59
C9orf85-202ENST00000377027 HRCT1Q6UXD1 115 aa5.14□□□□□ -1.59
C9orf85-202ENST00000377027 LINC00308Q8TCZ7 52 aa5.14□□□□□ -1.59
C9orf85-202ENST00000377027 COLCA2A8K830 154 aa5.13□□□□□ -1.59
C9orf85-202ENST00000377027 TTTY13Q9BZ97 58 aa5.13□□□□□ -1.59
C9orf85-202ENST00000377027 HSPB8Q9UJY1 196 aa5.13□□□□□ -1.59
C9orf85-202ENST00000377027 C5orf52A6NGY3 159 aa5.12□□□□□ -1.59
C9orf85-202ENST00000377027 IGLV8-61A0A075B6I0 122 aa5.11□□□□□ -1.59
C9orf85-202ENST00000377027 A0A0G2JQZ4 141 aa5.11□□□□□ -1.59
C9orf85-202ENST00000377027 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
C9orf85-202ENST00000377027 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
C9orf85-202ENST00000377027 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
C9orf85-202ENST00000377027 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
C9orf85-202ENST00000377027 SYS1-DBNDD2H3BUS1 97 aa5.09□□□□□ -1.59
C9orf85-202ENST00000377027 TIMM17BO60830 172 aa5.09□□□□□ -1.59
C9orf85-202ENST00000377027 Q1RN00 199 aa5.09□□□□□ -1.59
C9orf85-202ENST00000377027 C6orf99Q4VX62 202 aa5.09□□□□□ -1.59
C9orf85-202ENST00000377027 LIMD2Q9BT23 127 aa5.09□□□□□ -1.59
C9orf85-202ENST00000377027 H7C2G1 150 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 MT3P25713 68 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 OR13C6PQ8NH95 151 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 SPANXDQ9BXN6 97 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 DHRS4-AS1Q9P1J3 65 aa5.08□□□□□ -1.6
C9orf85-202ENST00000377027 HIST1H2BKO60814 126 aa5.07□□□□□ -1.6
C9orf85-202ENST00000377027 HIST1H2BJP06899 126 aa5.07□□□□□ -1.6
C9orf85-202ENST00000377027 HIST1H2BOP23527 126 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms