RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
VPS13A-204ENST00000376634 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.04
VPS13A-204ENST00000376634 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.04
VPS13A-204ENST00000376634 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.05
VPS13A-204ENST00000376634 PRO3102Q9H379 93 aa8.52□□□□□ -1.05
VPS13A-204ENST00000376634 STAB2Q8WWQ8 2551 aa8.51□□□□□ -1.05
VPS13A-204ENST00000376634 ST20-AS1Q8NBB2 130 aa8.51□□□□□ -1.05
VPS13A-204ENST00000376634 DNAH12Q6ZR08 3092 aa8.5□□□□□ -1.05
VPS13A-204ENST00000376634 MIR22HGQ0VDD5 57 aa8.5□□□□□ -1.05
VPS13A-204ENST00000376634 A0A1W2PPR1 153 aa8.5□□□□□ -1.05
VPS13A-204ENST00000376634 KMT2BQ9UMN6 2715 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-204ENST00000376634 FAM19A4Q96LR4 140 aa8.49□□□□□ -1.05
VPS13A-204ENST00000376634 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
VPS13A-204ENST00000376634 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
VPS13A-204ENST00000376634 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
VPS13A-204ENST00000376634 IGLV6-57P01721 117 aa8.46□□□□□ -1.06
VPS13A-204ENST00000376634 FAM168BA1KXE4 195 aa8.45□□□□□ -1.06
VPS13A-204ENST00000376634 CD164Q04900 197 aa8.45□□□□□ -1.06
VPS13A-204ENST00000376634 KTN1-AS1Q86SY8 53 aa8.45□□□□□ -1.06
VPS13A-204ENST00000376634 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
VPS13A-204ENST00000376634 ITPR2Q14571 2701 aa8.44□□□□□ -1.06
VPS13A-204ENST00000376634 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
VPS13A-204ENST00000376634 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
VPS13A-204ENST00000376634 A8MUN3 132 aa8.43□□□□□ -1.06
VPS13A-204ENST00000376634 K7EQZ3 153 aa8.43□□□□□ -1.06
VPS13A-204ENST00000376634 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
VPS13A-204ENST00000376634 GOLGB1Q14789 3259 aaKnown RBP8.42□□□□□ -1.06
VPS13A-204ENST00000376634 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
VPS13A-204ENST00000376634 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
VPS13A-204ENST00000376634 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
VPS13A-204ENST00000376634 Q8NAQ8 132 aa8.41□□□□□ -1.06
VPS13A-204ENST00000376634 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.07
VPS13A-204ENST00000376634 ZNF292O60281 2723 aa8.36□□□□□ -1.07
VPS13A-204ENST00000376634 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
VPS13A-204ENST00000376634 LINC01554Q52M75 96 aa8.35□□□□□ -1.07
VPS13A-204ENST00000376634 DSCR10P59022 87 aa8.35□□□□□ -1.07
VPS13A-204ENST00000376634 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
VPS13A-204ENST00000376634 A0A1B0GVX0 72 aa8.34□□□□□ -1.07
VPS13A-204ENST00000376634 LCA10Q71F78 164 aa8.34□□□□□ -1.07
VPS13A-204ENST00000376634 PRR15Q8IV56 129 aa8.34□□□□□ -1.07
VPS13A-204ENST00000376634 KCNQ1DNQ9H478 68 aa8.33□□□□□ -1.08
VPS13A-204ENST00000376634 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
VPS13A-204ENST00000376634 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
VPS13A-204ENST00000376634 IGFL1Q6UW32 110 aa8.31□□□□□ -1.08
VPS13A-204ENST00000376634 A0A0D9SG42 100 aa8.31□□□□□ -1.08
VPS13A-204ENST00000376634 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
VPS13A-204ENST00000376634 C5orf42Q9H799 3197 aa8.3□□□□□ -1.08
VPS13A-204ENST00000376634 APCP25054 2843 aa8.3□□□□□ -1.08
VPS13A-204ENST00000376634 ZNF861PO60384 105 aa8.28□□□□□ -1.08
VPS13A-204ENST00000376634 IGLV1-50A0A075B6I6 118 aa8.28□□□□□ -1.08
VPS13A-204ENST00000376634 IGLV5-37A0A075B6J1 123 aa8.28□□□□□ -1.08
VPS13A-204ENST00000376634 KRTAP24-1Q3LI83 254 aa8.27□□□□□ -1.08
VPS13A-204ENST00000376634 C10orf142B7Z368 130 aa8.27□□□□□ -1.09
VPS13A-204ENST00000376634 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
VPS13A-204ENST00000376634 PCNTO95613 3336 aa8.25□□□□□ -1.09
VPS13A-204ENST00000376634 CFAP54Q96N23 3096 aa8.25□□□□□ -1.09
VPS13A-204ENST00000376634 LITAFQ99732 161 aa8.25□□□□□ -1.09
VPS13A-204ENST00000376634 LINC00483Q53H64 154 aa8.25□□□□□ -1.09
VPS13A-204ENST00000376634 A0A0C4DFX4 3053 aa8.24□□□□□ -1.09
VPS13A-204ENST00000376634 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
VPS13A-204ENST00000376634 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
VPS13A-204ENST00000376634 H7BZZ5 65 aa8.23□□□□□ -1.09
VPS13A-204ENST00000376634 Q1T7F1 81 aa8.22□□□□□ -1.09
VPS13A-204ENST00000376634 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
VPS13A-204ENST00000376634 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
VPS13A-204ENST00000376634 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
VPS13A-204ENST00000376634 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
VPS13A-204ENST00000376634 IGLV5-48A0A075B6I7 105 aa8.18□□□□□ -1.1
VPS13A-204ENST00000376634 Q8N1X5 172 aa8.17□□□□□ -1.1
VPS13A-204ENST00000376634 Q8N377 158 aa8.17□□□□□ -1.1
VPS13A-204ENST00000376634 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
VPS13A-204ENST00000376634 NSD1Q96L73 2696 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-204ENST00000376634 KRTAP10-11P60412 298 aa8.15□□□□□ -1.11
VPS13A-204ENST00000376634 A0A087WTM6 91 aa8.14□□□□□ -1.11
VPS13A-204ENST00000376634 PRR34Q9NV39 138 aa8.14□□□□□ -1.11
VPS13A-204ENST00000376634 IGLV7-43P04211 117 aa8.14□□□□□ -1.11
VPS13A-204ENST00000376634 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
VPS13A-204ENST00000376634 NBEAL2Q6ZNJ1 2754 aa8.13□□□□□ -1.11
VPS13A-204ENST00000376634 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
VPS13A-204ENST00000376634 K7EIL1 84 aa8.13□□□□□ -1.11
VPS13A-204ENST00000376634 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
VPS13A-204ENST00000376634 TRANK1O15050 2925 aa8.11□□□□□ -1.11
VPS13A-204ENST00000376634 ZNF575Q86XF7 245 aa8.1□□□□□ -1.11
VPS13A-204ENST00000376634 PSORS1C2Q9UIG4 136 aa8.1□□□□□ -1.11
VPS13A-204ENST00000376634 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
VPS13A-204ENST00000376634 A0A1W2PNN7 141 aa8.1□□□□□ -1.11
VPS13A-204ENST00000376634 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
VPS13A-204ENST00000376634 LAMA2P24043 3122 aaKnown RBP8.08□□□□□ -1.12
VPS13A-204ENST00000376634 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
VPS13A-204ENST00000376634 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
VPS13A-204ENST00000376634 C9orf163Q8N9P6 203 aa8.06□□□□□ -1.12
VPS13A-204ENST00000376634 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
VPS13A-204ENST00000376634 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
VPS13A-204ENST00000376634 M0R2T5 61 aa8.05□□□□□ -1.12
VPS13A-204ENST00000376634 KLK9Q2XQG4 91 aa8.05□□□□□ -1.12
VPS13A-204ENST00000376634 Q6ZSA8 131 aa8.05□□□□□ -1.12
VPS13A-204ENST00000376634 UTRNP46939 3433 aa8.03□□□□□ -1.12
VPS13A-204ENST00000376634 A0A1B0GU33 70 aa8.03□□□□□ -1.12
VPS13A-204ENST00000376634 H3BS24 57 aa8.02□□□□□ -1.12
VPS13A-204ENST00000376634 C19orf73Q9NVV2 129 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms