RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SERTAD4-AS1Q5TG53 156 aa7.42□□□□□ -1.22
HDAC6-203ENST00000376619 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
HDAC6-203ENST00000376619 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
HDAC6-203ENST00000376619 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
HDAC6-203ENST00000376619 NDUFC2O95298 119 aa7.4□□□□□ -1.22
HDAC6-203ENST00000376619 DNAH10OSP0CZ25 163 aa7.4□□□□□ -1.22
HDAC6-203ENST00000376619 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.22
HDAC6-203ENST00000376619 LINC00612Q8N6U2 182 aa7.4□□□□□ -1.23
HDAC6-203ENST00000376619 LOC107984640A0A0U1RRK4 108 aa7.38□□□□□ -1.23
HDAC6-203ENST00000376619 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
HDAC6-203ENST00000376619 MRPL55Q7Z7F7 128 aaKnown RBP7.38□□□□□ -1.23
HDAC6-203ENST00000376619 C15orf56Q8N910 161 aa7.38□□□□□ -1.23
HDAC6-203ENST00000376619 MUC7Q8TAX7 377 aa7.38□□□□□ -1.23
HDAC6-203ENST00000376619 FAM240AA0A1B0GVK7 77 aa7.38□□□□□ -1.23
HDAC6-203ENST00000376619 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
HDAC6-203ENST00000376619 Q6ZVQ6 151 aa7.37□□□□□ -1.23
HDAC6-203ENST00000376619 UQCRQO14949 82 aa7.36□□□□□ -1.23
HDAC6-203ENST00000376619 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
HDAC6-203ENST00000376619 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
HDAC6-203ENST00000376619 FAM30AQ9NZY2 134 aa7.36□□□□□ -1.23
HDAC6-203ENST00000376619 SRRM2Q9UQ35 2752 aaKnown RBP7.35□□□□□ -1.23
HDAC6-203ENST00000376619 VPREB1P12018 145 aa7.35□□□□□ -1.23
HDAC6-203ENST00000376619 A0A087WSZ3 146 aa7.34□□□□□ -1.23
HDAC6-203ENST00000376619 Q6JHZ5 121 aa7.34□□□□□ -1.23
HDAC6-203ENST00000376619 REG3GQ6UW15 175 aa7.34□□□□□ -1.24
HDAC6-203ENST00000376619 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
HDAC6-203ENST00000376619 LINC01547P58512 204 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-203ENST00000376619 C2orf48Q96LS8 159 aa7.33□□□□□ -1.24
HDAC6-203ENST00000376619 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
HDAC6-203ENST00000376619 COX7CP15954 63 aa7.32□□□□□ -1.24
HDAC6-203ENST00000376619 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
HDAC6-203ENST00000376619 PDE6GP18545 87 aa7.32□□□□□ -1.24
HDAC6-203ENST00000376619 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
HDAC6-203ENST00000376619 B9D2Q9BPU9 175 aa7.31□□□□□ -1.24
HDAC6-203ENST00000376619 NHLRC4P0CG21 123 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-203ENST00000376619 KRTAP21-3Q3LHN1 58 aa7.3□□□□□ -1.24
HDAC6-203ENST00000376619 DHRS4-AS1Q9P1J3 65 aa7.3□□□□□ -1.24
HDAC6-203ENST00000376619 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
HDAC6-203ENST00000376619 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
HDAC6-203ENST00000376619 MPLKIPQ8TAP9 179 aa7.29□□□□□ -1.24
HDAC6-203ENST00000376619 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
HDAC6-203ENST00000376619 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
HDAC6-203ENST00000376619 Q9BRP9 147 aa7.28□□□□□ -1.24
HDAC6-203ENST00000376619 ERC2-IT1O76042 136 aa7.28□□□□□ -1.24
HDAC6-203ENST00000376619 Q6Q795 121 aa7.27□□□□□ -1.24
HDAC6-203ENST00000376619 Q6ZQT0 140 aa7.27□□□□□ -1.24
HDAC6-203ENST00000376619 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
HDAC6-203ENST00000376619 TRBV7-7A0A0K0K1E9 115 aa7.26□□□□□ -1.25
HDAC6-203ENST00000376619 RPL37AP61513 92 aaKnown RBP7.26□□□□□ -1.25
HDAC6-203ENST00000376619 H3BNG1 76 aa7.25□□□□□ -1.25
HDAC6-203ENST00000376619 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-203ENST00000376619 CSMD3Q7Z407 3707 aa7.25□□□□□ -1.25
HDAC6-203ENST00000376619 NDUFB1O75438 58 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 Q6ZRX8 168 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 ANK3Q12955 4377 aaKnown RBP7.23□□□□□ -1.25
HDAC6-203ENST00000376619 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 NUPR2A6NF83 97 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
HDAC6-203ENST00000376619 ATP5EP2Q5VTU8 51 aa7.22□□□□□ -1.25
HDAC6-203ENST00000376619 LINC00528Q8N1L1 170 aa7.22□□□□□ -1.25
HDAC6-203ENST00000376619 NBDYA0A0U1RRE5 68 aa7.21□□□□□ -1.26
HDAC6-203ENST00000376619 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
HDAC6-203ENST00000376619 EPM2AB3EWF7 344 aa7.21□□□□□ -1.26
HDAC6-203ENST00000376619 J3KT08 172 aa7.21□□□□□ -1.26
HDAC6-203ENST00000376619 Q8N377 158 aa7.21□□□□□ -1.26
HDAC6-203ENST00000376619 H3BQ85 93 aa7.2□□□□□ -1.26
HDAC6-203ENST00000376619 KRTAP1-5Q9BYS1 174 aa7.2□□□□□ -1.26
HDAC6-203ENST00000376619 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
HDAC6-203ENST00000376619 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
HDAC6-203ENST00000376619 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
HDAC6-203ENST00000376619 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
HDAC6-203ENST00000376619 MP68P56378 58 aa7.19□□□□□ -1.26
HDAC6-203ENST00000376619 PRYO14603 147 aa7.18□□□□□ -1.26
HDAC6-203ENST00000376619 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
HDAC6-203ENST00000376619 C1orf134Q5TEV5 83 aa7.18□□□□□ -1.26
HDAC6-203ENST00000376619 LINC00208Q96KT6 92 aa7.18□□□□□ -1.26
HDAC6-203ENST00000376619 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
HDAC6-203ENST00000376619 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-203ENST00000376619 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
HDAC6-203ENST00000376619 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
HDAC6-203ENST00000376619 WIPF1O43516 503 aa7.16□□□□□ -1.26
HDAC6-203ENST00000376619 MOBPQ13875 183 aa7.15□□□□□ -1.26
HDAC6-203ENST00000376619 C16orf90A8MZG2 172 aa7.15□□□□□ -1.26
HDAC6-203ENST00000376619 PCOTHQ58A44 107 aa7.15□□□□□ -1.27
HDAC6-203ENST00000376619 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.27
HDAC6-203ENST00000376619 COL7A1Q02388 2944 aa7.15□□□□□ -1.27
HDAC6-203ENST00000376619 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
HDAC6-203ENST00000376619 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
HDAC6-203ENST00000376619 TMEM254Q8TBM7 123 aa7.13□□□□□ -1.27
HDAC6-203ENST00000376619 K7EQZ3 153 aa7.13□□□□□ -1.27
HDAC6-203ENST00000376619 RTL8CO15255 209 aa7.12□□□□□ -1.27
HDAC6-203ENST00000376619 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
HDAC6-203ENST00000376619 Q8NBF4 154 aa7.11□□□□□ -1.27
HDAC6-203ENST00000376619 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
HDAC6-203ENST00000376619 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
HDAC6-203ENST00000376619 APLNQ9ULZ1 77 aa7.1□□□□□ -1.27
HDAC6-203ENST00000376619 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-203ENST00000376619 A0A1W2PNM2 257 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms