RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 PRYO14603 147 aa12.19□□□□□ -0.46
PPP1R3F-202ENST00000376188 FAM168BA1KXE4 195 aa12.17□□□□□ -0.46
PPP1R3F-202ENST00000376188 IGLV1-50A0A075B6I6 118 aa12.17□□□□□ -0.46
PPP1R3F-202ENST00000376188 B9D2Q9BPU9 175 aa12.16□□□□□ -0.46
PPP1R3F-202ENST00000376188 M0R2N4 97 aa12.16□□□□□ -0.46
PPP1R3F-202ENST00000376188 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
PPP1R3F-202ENST00000376188 DHRS4-AS1Q9P1J3 65 aa12.16□□□□□ -0.46
PPP1R3F-202ENST00000376188 STAB2Q8WWQ8 2551 aa12.15□□□□□ -0.46
PPP1R3F-202ENST00000376188 A0A087WVE0 104 aa12.15□□□□□ -0.46
PPP1R3F-202ENST00000376188 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
PPP1R3F-202ENST00000376188 SPRR1AP35321 89 aa12.15□□□□□ -0.47
PPP1R3F-202ENST00000376188 Q6ZRX8 168 aa12.15□□□□□ -0.47
PPP1R3F-202ENST00000376188 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.47
PPP1R3F-202ENST00000376188 RPL37AP8A6NKH3 93 aa12.14□□□□□ -0.47
PPP1R3F-202ENST00000376188 MDFIQ99750 246 aa12.14□□□□□ -0.47
PPP1R3F-202ENST00000376188 DNAH9Q9NYC9 4486 aa12.14□□□□□ -0.47
PPP1R3F-202ENST00000376188 UQCRQO14949 82 aa12.13□□□□□ -0.47
PPP1R3F-202ENST00000376188 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
PPP1R3F-202ENST00000376188 MRPL55Q7Z7F7 128 aaKnown RBP12.13□□□□□ -0.47
PPP1R3F-202ENST00000376188 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
PPP1R3F-202ENST00000376188 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
PPP1R3F-202ENST00000376188 ETDCA0A1B0GVM5 59 aa12.12□□□□□ -0.47
PPP1R3F-202ENST00000376188 Q6ZVQ6 151 aa12.12□□□□□ -0.47
PPP1R3F-202ENST00000376188 FAM19A5Q7Z5A7 132 aaPredicted RBP12.11□□□□□ -0.47
PPP1R3F-202ENST00000376188 PSCAO43653 123 aa12.11□□□□□ -0.47
PPP1R3F-202ENST00000376188 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
PPP1R3F-202ENST00000376188 COX7CP15954 63 aa12.1□□□□□ -0.47
PPP1R3F-202ENST00000376188 COL7A1Q02388 2944 aa12.09□□□□□ -0.47
PPP1R3F-202ENST00000376188 LINC01547P58512 204 aaPredicted RBP12.08□□□□□ -0.48
PPP1R3F-202ENST00000376188 Q8N377 158 aa12.08□□□□□ -0.48
PPP1R3F-202ENST00000376188 Q9BRP9 147 aa12.08□□□□□ -0.48
PPP1R3F-202ENST00000376188 FAM19A1Q7Z5A9 133 aa12.07□□□□□ -0.48
PPP1R3F-202ENST00000376188 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
PPP1R3F-202ENST00000376188 C16orf90A8MZG2 172 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 CXCL6P80162 114 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 HAMPP81172 84 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 DEFB105AQ8NG35 78 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 SS18L2Q9UHA2 77 aa12.06□□□□□ -0.48
PPP1R3F-202ENST00000376188 DYNC2H1Q8NCM8 4307 aaKnown RBP12.04□□□□□ -0.48
PPP1R3F-202ENST00000376188 SERP2Q8N6R1 65 aa12.04□□□□□ -0.48
PPP1R3F-202ENST00000376188 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
PPP1R3F-202ENST00000376188 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
PPP1R3F-202ENST00000376188 A0A096LNI7 61 aa12.03□□□□□ -0.48
PPP1R3F-202ENST00000376188 NUPR2A6NF83 97 aa12.03□□□□□ -0.48
PPP1R3F-202ENST00000376188 IGKV2-24A0A0C4DH68 120 aa12□□□□□ -0.49
PPP1R3F-202ENST00000376188 UBE2BP63146 152 aa12□□□□□ -0.49
PPP1R3F-202ENST00000376188 LYSTQ99698 3801 aa11.99□□□□□ -0.49
PPP1R3F-202ENST00000376188 CRYGAP11844 174 aa11.99□□□□□ -0.49
PPP1R3F-202ENST00000376188 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
PPP1R3F-202ENST00000376188 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
PPP1R3F-202ENST00000376188 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.97□□□□□ -0.49
PPP1R3F-202ENST00000376188 NBDYA0A0U1RRE5 68 aa11.96□□□□□ -0.49
PPP1R3F-202ENST00000376188 A0A1B0GW54 56 aa11.96□□□□□ -0.49
PPP1R3F-202ENST00000376188 TNP2Q05952 138 aa11.96□□□□□ -0.49
PPP1R3F-202ENST00000376188 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.5
PPP1R3F-202ENST00000376188 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
PPP1R3F-202ENST00000376188 BCE1O60756 84 aa11.95□□□□□ -0.5
PPP1R3F-202ENST00000376188 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
PPP1R3F-202ENST00000376188 FUSP35637 526 aaKnown RBP eCLIP11.94□□□□□ -0.5
PPP1R3F-202ENST00000376188 NREPQ16612 68 aa11.93□□□□□ -0.5
PPP1R3F-202ENST00000376188 C1orf137Q5JT78 98 aa11.92□□□□□ -0.5
PPP1R3F-202ENST00000376188 LRCOL1A6NCL2 159 aa11.91□□□□□ -0.5
PPP1R3F-202ENST00000376188 SCXQ7RTU7 201 aa11.91□□□□□ -0.5
PPP1R3F-202ENST00000376188 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
PPP1R3F-202ENST00000376188 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
PPP1R3F-202ENST00000376188 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.5
PPP1R3F-202ENST00000376188 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
PPP1R3F-202ENST00000376188 PLECQ15149 4684 aaKnown RBP11.89□□□□□ -0.51
PPP1R3F-202ENST00000376188 A0A1W2PNM2 257 aa11.88□□□□□ -0.51
PPP1R3F-202ENST00000376188 Q6ZRN7 208 aaPredicted RBP11.88□□□□□ -0.51
PPP1R3F-202ENST00000376188 Q8NBF4 154 aa11.88□□□□□ -0.51
PPP1R3F-202ENST00000376188 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
PPP1R3F-202ENST00000376188 PRLHP81277 87 aa11.87□□□□□ -0.51
PPP1R3F-202ENST00000376188 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
PPP1R3F-202ENST00000376188 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
PPP1R3F-202ENST00000376188 F8WEM9 126 aa11.85□□□□□ -0.51
PPP1R3F-202ENST00000376188 SMIM29Q86T20 159 aa11.85□□□□□ -0.51
PPP1R3F-202ENST00000376188 TRAV7A0A075B6U4 112 aa11.85□□□□□ -0.51
PPP1R3F-202ENST00000376188 BPY2O14599 106 aa11.85□□□□□ -0.51
PPP1R3F-202ENST00000376188 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
PPP1R3F-202ENST00000376188 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
PPP1R3F-202ENST00000376188 PHF5AQ7RTV0 110 aaKnown RBP11.84□□□□□ -0.51
PPP1R3F-202ENST00000376188 HIGD2AQ9BW72 106 aa11.82□□□□□ -0.52
PPP1R3F-202ENST00000376188 H0Y9J4 135 aa11.82□□□□□ -0.52
PPP1R3F-202ENST00000376188 CYSTM1Q9H1C7 97 aa11.81□□□□□ -0.52
PPP1R3F-202ENST00000376188 IGKV4-1P06312 121 aa11.8□□□□□ -0.52
PPP1R3F-202ENST00000376188 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
PPP1R3F-202ENST00000376188 TMEM258P61165 79 aa11.78□□□□□ -0.52
PPP1R3F-202ENST00000376188 KRTAP11-1Q8IUC1 163 aa11.78□□□□□ -0.52
PPP1R3F-202ENST00000376188 Q8N9L7 120 aa11.78□□□□□ -0.52
PPP1R3F-202ENST00000376188 IGLV8-61A0A075B6I0 122 aa11.77□□□□□ -0.52
PPP1R3F-202ENST00000376188 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
PPP1R3F-202ENST00000376188 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
PPP1R3F-202ENST00000376188 STARD9Q9P2P6 4700 aa11.75□□□□□ -0.53
PPP1R3F-202ENST00000376188 PRKDCP78527 4128 aaKnown RBP11.75□□□□□ -0.53
PPP1R3F-202ENST00000376188 C20orf197Q8N268 126 aa11.75□□□□□ -0.53
PPP1R3F-202ENST00000376188 IGFL1Q6UW32 110 aa11.75□□□□□ -0.53
PPP1R3F-202ENST00000376188 UBE2AP49459 152 aa11.74□□□□□ -0.53
PPP1R3F-202ENST00000376188 SPRR1BP22528 89 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms