RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 IGFL1Q6UW32 110 aa9.73□□□□□ -0.85
NOTCH4-201ENST00000375023 F8P00451 2351 aa9.73□□□□□ -0.85
NOTCH4-201ENST00000375023 CHD8Q9HCK8 2581 aa9.72□□□□□ -0.85
NOTCH4-201ENST00000375023 LITAFQ99732 161 aa9.72□□□□□ -0.85
NOTCH4-201ENST00000375023 C8orf87E5RJ46 101 aa9.71□□□□□ -0.85
NOTCH4-201ENST00000375023 ACANP16112 2415 aa9.71□□□□□ -0.86
NOTCH4-201ENST00000375023 USP9YO00507 2555 aaPredicted RBP9.7□□□□□ -0.86
NOTCH4-201ENST00000375023 CEP295Q9C0D2 2601 aa9.7□□□□□ -0.86
NOTCH4-201ENST00000375023 MTORP42345 2549 aa9.7□□□□□ -0.86
NOTCH4-201ENST00000375023 CASC10Q5T4H9 136 aa9.69□□□□□ -0.86
NOTCH4-201ENST00000375023 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
NOTCH4-201ENST00000375023 Q6ZSA8 131 aa9.69□□□□□ -0.86
NOTCH4-201ENST00000375023 C9orf129Q5T035 196 aaKnown RBP9.69□□□□□ -0.86
NOTCH4-201ENST00000375023 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
NOTCH4-201ENST00000375023 Q5VSD8 79 aa9.67□□□□□ -0.86
NOTCH4-201ENST00000375023 A0A087WTM6 91 aa9.67□□□□□ -0.86
NOTCH4-201ENST00000375023 C5orf42Q9H799 3197 aa9.65□□□□□ -0.86
NOTCH4-201ENST00000375023 LOC101927531A0A1B0GV80 90 aa9.65□□□□□ -0.86
NOTCH4-201ENST00000375023 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
NOTCH4-201ENST00000375023 Q8N1X5 172 aa9.64□□□□□ -0.87
NOTCH4-201ENST00000375023 H3BPC8 53 aa9.62□□□□□ -0.87
NOTCH4-201ENST00000375023 Q8N377 158 aa9.62□□□□□ -0.87
NOTCH4-201ENST00000375023 ZNF861PO60384 105 aa9.61□□□□□ -0.87
NOTCH4-201ENST00000375023 TNP2Q05952 138 aa9.61□□□□□ -0.87
NOTCH4-201ENST00000375023 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
NOTCH4-201ENST00000375023 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
NOTCH4-201ENST00000375023 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
NOTCH4-201ENST00000375023 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
NOTCH4-201ENST00000375023 PCNTO95613 3336 aa9.58□□□□□ -0.88
NOTCH4-201ENST00000375023 A0A1B0GVX0 72 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 MIR22HGQ0VDD5 57 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 IGLV7-46A0A075B6I9 117 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 A0A1B0GW54 56 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 BPTFQ12830 3046 aa9.57□□□□□ -0.88
NOTCH4-201ENST00000375023 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
NOTCH4-201ENST00000375023 UQCR11O14957 56 aa9.55□□□□□ -0.88
NOTCH4-201ENST00000375023 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
NOTCH4-201ENST00000375023 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
NOTCH4-201ENST00000375023 C19orf73Q9NVV2 129 aa9.53□□□□□ -0.88
NOTCH4-201ENST00000375023 CEP350Q5VT06 3117 aa9.53□□□□□ -0.88
NOTCH4-201ENST00000375023 PRR26Q8N8Z3 221 aa9.52□□□□□ -0.88
NOTCH4-201ENST00000375023 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
NOTCH4-201ENST00000375023 CAMK2N1Q7Z7J9 78 aa9.49□□□□□ -0.89
NOTCH4-201ENST00000375023 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
NOTCH4-201ENST00000375023 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
NOTCH4-201ENST00000375023 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
NOTCH4-201ENST00000375023 PRRC2CQ9Y520 2896 aaKnown RBP9.45□□□□□ -0.9
NOTCH4-201ENST00000375023 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
NOTCH4-201ENST00000375023 A0A096LNT2 108 aa9.42□□□□□ -0.9
NOTCH4-201ENST00000375023 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
NOTCH4-201ENST00000375023 A0A1W2PNM2 257 aa9.39□□□□□ -0.91
NOTCH4-201ENST00000375023 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
NOTCH4-201ENST00000375023 CR1P17927 2039 aa9.38□□□□□ -0.91
NOTCH4-201ENST00000375023 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
NOTCH4-201ENST00000375023 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
NOTCH4-201ENST00000375023 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
NOTCH4-201ENST00000375023 H7BZZ5 65 aa9.34□□□□□ -0.91
NOTCH4-201ENST00000375023 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
NOTCH4-201ENST00000375023 KRTAP1-3Q8IUG1 177 aa9.34□□□□□ -0.91
NOTCH4-201ENST00000375023 CDC42SE1Q9NRR8 79 aa9.33□□□□□ -0.92
NOTCH4-201ENST00000375023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
NOTCH4-201ENST00000375023 LUZP6Q538Z0 58 aa9.31□□□□□ -0.92
NOTCH4-201ENST00000375023 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
NOTCH4-201ENST00000375023 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.93
NOTCH4-201ENST00000375023 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
NOTCH4-201ENST00000375023 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
NOTCH4-201ENST00000375023 HECTD1Q9ULT8 2610 aa9.25□□□□□ -0.93
NOTCH4-201ENST00000375023 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
NOTCH4-201ENST00000375023 CFAP54Q96N23 3096 aa9.23□□□□□ -0.93
NOTCH4-201ENST00000375023 CD164Q04900 197 aa9.22□□□□□ -0.93
NOTCH4-201ENST00000375023 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
NOTCH4-201ENST00000375023 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
NOTCH4-201ENST00000375023 XIRP2A4UGR9 3374 aa9.17□□□□□ -0.94
NOTCH4-201ENST00000375023 WIPF1O43516 503 aa9.15□□□□□ -0.94
NOTCH4-201ENST00000375023 HRES1P13985 223 aa9.15□□□□□ -0.94
NOTCH4-201ENST00000375023 EPG5Q9HCE0 2579 aa9.14□□□□□ -0.95
NOTCH4-201ENST00000375023 S4R3F8 94 aa9.13□□□□□ -0.95
NOTCH4-201ENST00000375023 LCA10Q71F78 164 aa9.13□□□□□ -0.95
NOTCH4-201ENST00000375023 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
NOTCH4-201ENST00000375023 BRCA2P51587 3418 aa9.11□□□□□ -0.95
NOTCH4-201ENST00000375023 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
NOTCH4-201ENST00000375023 A0A1B0GU33 70 aa9.11□□□□□ -0.95
NOTCH4-201ENST00000375023 SEC61BP60468 96 aaKnown RBP9.09□□□□□ -0.95
NOTCH4-201ENST00000375023 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
NOTCH4-201ENST00000375023 LCE6AA0A183 80 aa9.09□□□□□ -0.95
NOTCH4-201ENST00000375023 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
NOTCH4-201ENST00000375023 SPANXA2-OT1Q8N9U9 137 aa9.08□□□□□ -0.96
NOTCH4-201ENST00000375023 Q8NDZ9 215 aa9.07□□□□□ -0.96
NOTCH4-201ENST00000375023 OCR1Q9BZK8 76 aa9.07□□□□□ -0.96
NOTCH4-201ENST00000375023 Q1T7F1 81 aa9.07□□□□□ -0.96
NOTCH4-201ENST00000375023 LAMA3Q16787 3333 aa9.05□□□□□ -0.96
NOTCH4-201ENST00000375023 PRAC1Q96KF2 57 aa9.04□□□□□ -0.96
NOTCH4-201ENST00000375023 LAMA2P24043 3122 aaKnown RBP9.03□□□□□ -0.96
NOTCH4-201ENST00000375023 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
NOTCH4-201ENST00000375023 ATRQ13535 2644 aa9.02□□□□□ -0.97
NOTCH4-201ENST00000375023 R4GN34 69 aa9.01□□□□□ -0.97
NOTCH4-201ENST00000375023 KRTAP10-2P60368 255 aa9□□□□□ -0.97
NOTCH4-201ENST00000375023 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
NOTCH4-201ENST00000375023 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms