RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ELOF1P60002 83 aaKnown RBP7.9□□□□□ -1.14
HMGCL-202ENST00000374487 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
HMGCL-202ENST00000374487 NKAPP1Q8N9T2 125 aa7.9□□□□□ -1.14
HMGCL-202ENST00000374487 GHRHP01286 108 aa7.9□□□□□ -1.15
HMGCL-202ENST00000374487 LY6G6CO95867 125 aa7.89□□□□□ -1.15
HMGCL-202ENST00000374487 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
HMGCL-202ENST00000374487 KMT2AQ03164 3969 aa7.89□□□□□ -1.15
HMGCL-202ENST00000374487 FAM236AA0A1B0GUQ0 79 aa7.88□□□□□ -1.15
HMGCL-202ENST00000374487 FAM236BA0A1B0GV22 79 aa7.88□□□□□ -1.15
HMGCL-202ENST00000374487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
HMGCL-202ENST00000374487 UPK3BQ9BT76 320 aa7.88□□□□□ -1.15
HMGCL-202ENST00000374487 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
HMGCL-202ENST00000374487 LINC00476Q8WZB0 136 aa7.87□□□□□ -1.15
HMGCL-202ENST00000374487 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
HMGCL-202ENST00000374487 DSCR8Q96T75 97 aa7.87□□□□□ -1.15
HMGCL-202ENST00000374487 IGKV3D-7A0A0C4DH55 119 aa7.86□□□□□ -1.15
HMGCL-202ENST00000374487 SERTAD4-AS1Q5TG53 156 aa7.86□□□□□ -1.15
HMGCL-202ENST00000374487 Q6JHZ5 121 aa7.86□□□□□ -1.15
HMGCL-202ENST00000374487 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
HMGCL-202ENST00000374487 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
HMGCL-202ENST00000374487 Q6ZQT0 140 aa7.84□□□□□ -1.15
HMGCL-202ENST00000374487 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
HMGCL-202ENST00000374487 KCNQ1DNQ9H478 68 aa7.84□□□□□ -1.15
HMGCL-202ENST00000374487 PDE6GP18545 87 aa7.83□□□□□ -1.16
HMGCL-202ENST00000374487 UBE2DNLQ8IWF7 75 aa7.83□□□□□ -1.16
HMGCL-202ENST00000374487 UBL5Q9BZL1 73 aa7.83□□□□□ -1.16
HMGCL-202ENST00000374487 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
HMGCL-202ENST00000374487 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
HMGCL-202ENST00000374487 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
HMGCL-202ENST00000374487 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
HMGCL-202ENST00000374487 LOC107984640A0A0U1RRK4 108 aa7.8□□□□□ -1.16
HMGCL-202ENST00000374487 PSCAO43653 123 aa7.8□□□□□ -1.16
HMGCL-202ENST00000374487 B5MCH6 92 aa7.8□□□□□ -1.16
HMGCL-202ENST00000374487 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
HMGCL-202ENST00000374487 EPPK1P58107 5090 aaKnown RBP7.8□□□□□ -1.16
HMGCL-202ENST00000374487 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
HMGCL-202ENST00000374487 IGLV5-37A0A075B6J1 123 aa7.78□□□□□ -1.16
HMGCL-202ENST00000374487 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
HMGCL-202ENST00000374487 IGLV1-50A0A075B6I6 118 aa7.78□□□□□ -1.16
HMGCL-202ENST00000374487 KRTAP1-5Q9BYS1 174 aa7.78□□□□□ -1.16
HMGCL-202ENST00000374487 A0A087WVE0 104 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 M0R2N4 97 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 MRPL55Q7Z7F7 128 aaKnown RBP7.77□□□□□ -1.17
HMGCL-202ENST00000374487 DEFB105AQ8NG35 78 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 FRAS1Q86XX4 4008 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 TRBV7-4A0A0J9YYF1 115 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 PRYO14603 147 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
HMGCL-202ENST00000374487 ATOX1O00244 68 aa7.76□□□□□ -1.17
HMGCL-202ENST00000374487 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
HMGCL-202ENST00000374487 Q6ZRX8 168 aa7.76□□□□□ -1.17
HMGCL-202ENST00000374487 KRTAP7-1Q8IUC3 87 aa7.75□□□□□ -1.17
HMGCL-202ENST00000374487 HAMPP81172 84 aa7.74□□□□□ -1.17
HMGCL-202ENST00000374487 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
HMGCL-202ENST00000374487 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
HMGCL-202ENST00000374487 Q6ZVQ6 151 aa7.73□□□□□ -1.17
HMGCL-202ENST00000374487 IGKV2-24A0A0C4DH68 120 aa7.73□□□□□ -1.17
HMGCL-202ENST00000374487 KRTAP4-16G5E9R7 235 aaPredicted RBP7.73□□□□□ -1.17
HMGCL-202ENST00000374487 SPRR1AP35321 89 aa7.73□□□□□ -1.17
HMGCL-202ENST00000374487 UQCRQO14949 82 aa7.72□□□□□ -1.17
HMGCL-202ENST00000374487 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
HMGCL-202ENST00000374487 FAM19A1Q7Z5A9 133 aa7.72□□□□□ -1.17
HMGCL-202ENST00000374487 Q8N377 158 aa7.72□□□□□ -1.17
HMGCL-202ENST00000374487 C3orf22Q8N5N4 141 aa7.72□□□□□ -1.17
HMGCL-202ENST00000374487 Q9BRP9 147 aa7.72□□□□□ -1.17
HMGCL-202ENST00000374487 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.71□□□□□ -1.17
HMGCL-202ENST00000374487 C16orf90A8MZG2 172 aa7.71□□□□□ -1.17
HMGCL-202ENST00000374487 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.17
HMGCL-202ENST00000374487 C14orf177Q52M58 125 aa7.71□□□□□ -1.17
HMGCL-202ENST00000374487 A0A096LNI7 61 aa7.71□□□□□ -1.18
HMGCL-202ENST00000374487 UBE2BP63146 152 aa7.7□□□□□ -1.18
HMGCL-202ENST00000374487 REG3GQ6UW15 175 aa7.7□□□□□ -1.18
HMGCL-202ENST00000374487 COX7CP15954 63 aa7.7□□□□□ -1.18
HMGCL-202ENST00000374487 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
HMGCL-202ENST00000374487 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
HMGCL-202ENST00000374487 CXCL6P80162 114 aa7.68□□□□□ -1.18
HMGCL-202ENST00000374487 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
HMGCL-202ENST00000374487 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
HMGCL-202ENST00000374487 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
HMGCL-202ENST00000374487 IGLV5-48A0A075B6I7 105 aa7.66□□□□□ -1.18
HMGCL-202ENST00000374487 A0A1W2PNN7 141 aa7.66□□□□□ -1.18
HMGCL-202ENST00000374487 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
HMGCL-202ENST00000374487 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
HMGCL-202ENST00000374487 Q6ZR54 194 aa7.66□□□□□ -1.18
HMGCL-202ENST00000374487 RTL8CO15255 209 aa7.64□□□□□ -1.19
HMGCL-202ENST00000374487 NREPQ16612 68 aa7.64□□□□□ -1.19
HMGCL-202ENST00000374487 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMGCL-202ENST00000374487 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
HMGCL-202ENST00000374487 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
HMGCL-202ENST00000374487 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
HMGCL-202ENST00000374487 PKIGQ9Y2B9 76 aa7.63□□□□□ -1.19
HMGCL-202ENST00000374487 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
HMGCL-202ENST00000374487 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
HMGCL-202ENST00000374487 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
HMGCL-202ENST00000374487 CRYGAP11844 174 aa7.61□□□□□ -1.19
HMGCL-202ENST00000374487 PRLHP81277 87 aa7.61□□□□□ -1.19
HMGCL-202ENST00000374487 HIGD2AQ9BW72 106 aa7.6□□□□□ -1.19
HMGCL-202ENST00000374487 TNP2Q05952 138 aa7.6□□□□□ -1.19
HMGCL-202ENST00000374487 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms