RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 ST20-AS1Q8NBB2 130 aa6.93□□□□□ -1.3
CD28-202ENST00000374481 C6orf48Q9UBA6 75 aa6.93□□□□□ -1.3
CD28-202ENST00000374481 LINC00588Q9Y4M8 146 aa6.93□□□□□ -1.3
CD28-202ENST00000374481 CFAP47Q6ZTR5 3102 aa6.92□□□□□ -1.3
CD28-202ENST00000374481 DCHS1Q96JQ0 3298 aa6.92□□□□□ -1.3
CD28-202ENST00000374481 FREM2Q5SZK8 3169 aa6.92□□□□□ -1.3
CD28-202ENST00000374481 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
CD28-202ENST00000374481 A0A096LNT2 108 aa6.91□□□□□ -1.3
CD28-202ENST00000374481 C11orf45Q8TAV5 145 aa6.9□□□□□ -1.31
CD28-202ENST00000374481 Q9BRP9 147 aa6.9□□□□□ -1.31
CD28-202ENST00000374481 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
CD28-202ENST00000374481 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
CD28-202ENST00000374481 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
CD28-202ENST00000374481 Q5VV11 94 aa6.89□□□□□ -1.31
CD28-202ENST00000374481 REG3GQ6UW15 175 aa6.89□□□□□ -1.31
CD28-202ENST00000374481 RPL37AP61513 92 aaKnown RBP6.88□□□□□ -1.31
CD28-202ENST00000374481 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
CD28-202ENST00000374481 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
CD28-202ENST00000374481 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
CD28-202ENST00000374481 SPANXA2-OT1Q8N9U9 137 aa6.88□□□□□ -1.31
CD28-202ENST00000374481 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
CD28-202ENST00000374481 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
CD28-202ENST00000374481 COL27A1Q8IZC6 1860 aaPredicted RBP6.87□□□□□ -1.31
CD28-202ENST00000374481 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
CD28-202ENST00000374481 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
CD28-202ENST00000374481 A0A1W2PPR1 153 aa6.86□□□□□ -1.31
CD28-202ENST00000374481 Q75L30 129 aa6.86□□□□□ -1.31
CD28-202ENST00000374481 ACYP2P14621 99 aa6.86□□□□□ -1.31
CD28-202ENST00000374481 Q6ZRX8 168 aa6.85□□□□□ -1.31
CD28-202ENST00000374481 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.31
CD28-202ENST00000374481 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
CD28-202ENST00000374481 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
CD28-202ENST00000374481 Q8N377 158 aa6.82□□□□□ -1.32
CD28-202ENST00000374481 PRLHP81277 87 aa6.82□□□□□ -1.32
CD28-202ENST00000374481 ANKRD17O75179 2603 aaKnown RBP6.81□□□□□ -1.32
CD28-202ENST00000374481 NBEAQ8NFP9 2946 aa6.81□□□□□ -1.32
CD28-202ENST00000374481 IGLV1-51P01701 117 aa6.81□□□□□ -1.32
CD28-202ENST00000374481 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
CD28-202ENST00000374481 UQCR11O14957 56 aa6.8□□□□□ -1.32
CD28-202ENST00000374481 DEFB131BA0A096LNP1 70 aa6.79□□□□□ -1.32
CD28-202ENST00000374481 INAFM1C9JVW0 142 aa6.79□□□□□ -1.32
CD28-202ENST00000374481 KRTAP21-3Q3LHN1 58 aa6.79□□□□□ -1.32
CD28-202ENST00000374481 PHF5AQ7RTV0 110 aaKnown RBP6.79□□□□□ -1.32
CD28-202ENST00000374481 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
CD28-202ENST00000374481 LINC00313P59037 77 aa6.78□□□□□ -1.32
CD28-202ENST00000374481 A8MWP4 228 aa6.78□□□□□ -1.32
CD28-202ENST00000374481 SPINK1P00995 79 aa6.78□□□□□ -1.32
CD28-202ENST00000374481 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
CD28-202ENST00000374481 POLQO75417 2590 aa6.77□□□□□ -1.33
CD28-202ENST00000374481 CR1P17927 2039 aa6.77□□□□□ -1.33
CD28-202ENST00000374481 IGLV8-61A0A075B6I0 122 aa6.77□□□□□ -1.33
CD28-202ENST00000374481 MOBPQ13875 183 aa6.76□□□□□ -1.33
CD28-202ENST00000374481 DSCR10P59022 87 aa6.75□□□□□ -1.33
CD28-202ENST00000374481 IGLV5-48A0A075B6I7 105 aa6.75□□□□□ -1.33
CD28-202ENST00000374481 C14orf177Q52M58 125 aa6.74□□□□□ -1.33
CD28-202ENST00000374481 A0A0G2JQZ4 141 aa6.73□□□□□ -1.33
CD28-202ENST00000374481 A0A1W2PNN7 141 aa6.73□□□□□ -1.33
CD28-202ENST00000374481 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
CD28-202ENST00000374481 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
CD28-202ENST00000374481 HELZ2Q9BYK8 2649 aaKnown RBP6.73□□□□□ -1.33
CD28-202ENST00000374481 ACANP16112 2415 aa6.72□□□□□ -1.33
CD28-202ENST00000374481 HECTD1Q9ULT8 2610 aa6.72□□□□□ -1.33
CD28-202ENST00000374481 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
CD28-202ENST00000374481 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
CD28-202ENST00000374481 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
CD28-202ENST00000374481 SPINK7P58062 85 aa6.69□□□□□ -1.34
CD28-202ENST00000374481 Q8NDZ9 215 aa6.69□□□□□ -1.34
CD28-202ENST00000374481 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
CD28-202ENST00000374481 A8MU10 97 aa6.68□□□□□ -1.34
CD28-202ENST00000374481 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
CD28-202ENST00000374481 RELNP78509 3460 aa6.68□□□□□ -1.34
CD28-202ENST00000374481 LINC00612Q8N6U2 182 aa6.68□□□□□ -1.34
CD28-202ENST00000374481 X6R8D5 127 aa6.67□□□□□ -1.34
CD28-202ENST00000374481 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
CD28-202ENST00000374481 A6NN06 94 aa6.66□□□□□ -1.34
CD28-202ENST00000374481 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
CD28-202ENST00000374481 SMG1Q96Q15 3661 aaKnown RBP6.66□□□□□ -1.34
CD28-202ENST00000374481 SSBP3-AS1Q7Z2R9 100 aa6.66□□□□□ -1.34
CD28-202ENST00000374481 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
CD28-202ENST00000374481 FRYQ5TBA9 3013 aa6.65□□□□□ -1.34
CD28-202ENST00000374481 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.34
CD28-202ENST00000374481 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
CD28-202ENST00000374481 BOD1L1Q8NFC6 3051 aa6.65□□□□□ -1.35
CD28-202ENST00000374481 FAM168BA1KXE4 195 aa6.65□□□□□ -1.35
CD28-202ENST00000374481 PRR34Q9NV39 138 aa6.64□□□□□ -1.35
CD28-202ENST00000374481 C1orf134Q5TEV5 83 aa6.64□□□□□ -1.35
CD28-202ENST00000374481 DSPP15924 2871 aaKnown RBP6.64□□□□□ -1.35
CD28-202ENST00000374481 ZCCHC13Q8WW36 166 aaKnown RBP6.63□□□□□ -1.35
CD28-202ENST00000374481 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
CD28-202ENST00000374481 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
CD28-202ENST00000374481 GIG44P09565 113 aaPredicted RBP6.62□□□□□ -1.35
CD28-202ENST00000374481 CSNK1G2-AS1Q8NCQ2 148 aa6.62□□□□□ -1.35
CD28-202ENST00000374481 CIRBP-AS1Q8TBR5 109 aa6.62□□□□□ -1.35
CD28-202ENST00000374481 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
CD28-202ENST00000374481 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
CD28-202ENST00000374481 Q8NAQ8 132 aa6.61□□□□□ -1.35
CD28-202ENST00000374481 MGAQ8IWI9 3026 aa6.6□□□□□ -1.35
CD28-202ENST00000374481 ATMQ13315 3056 aa6.59□□□□□ -1.35
CD28-202ENST00000374481 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
CD28-202ENST00000374481 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms