RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
PTPRU-202ENST00000373779 KRTAP24-1Q3LI83 254 aa11.46□□□□□ -0.57
PTPRU-202ENST00000373779 VCANP13611 3396 aa11.45□□□□□ -0.58
PTPRU-202ENST00000373779 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
PTPRU-202ENST00000373779 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
PTPRU-202ENST00000373779 TRAV22A0A0B4J277 110 aa11.43□□□□□ -0.58
PTPRU-202ENST00000373779 MOBPQ13875 183 aa11.43□□□□□ -0.58
PTPRU-202ENST00000373779 MDFIQ99750 246 aa11.42□□□□□ -0.58
PTPRU-202ENST00000373779 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
PTPRU-202ENST00000373779 KRTAP10-11P60412 298 aa11.4□□□□□ -0.58
PTPRU-202ENST00000373779 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
PTPRU-202ENST00000373779 TLX1NBP0CAT3 122 aa11.4□□□□□ -0.58
PTPRU-202ENST00000373779 KRTAP1-1Q07627 177 aa11.4□□□□□ -0.58
PTPRU-202ENST00000373779 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.59
PTPRU-202ENST00000373779 A8MWP4 228 aa11.39□□□□□ -0.59
PTPRU-202ENST00000373779 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
PTPRU-202ENST00000373779 K7ERS5 55 aa11.37□□□□□ -0.59
PTPRU-202ENST00000373779 ZNF292O60281 2723 aa11.37□□□□□ -0.59
PTPRU-202ENST00000373779 FASNP49327 2511 aaKnown RBP11.36□□□□□ -0.59
PTPRU-202ENST00000373779 CELSR3Q9NYQ7 3312 aa11.35□□□□□ -0.59
PTPRU-202ENST00000373779 LINC00336Q6ZUF6 198 aa11.34□□□□□ -0.59
PTPRU-202ENST00000373779 NBDYA0A0U1RRE5 68 aa11.33□□□□□ -0.6
PTPRU-202ENST00000373779 A0A1W2PNM2 257 aa11.33□□□□□ -0.6
PTPRU-202ENST00000373779 SPAG11AQ6PDA7 123 aa11.33□□□□□ -0.6
PTPRU-202ENST00000373779 DSPP15924 2871 aaKnown RBP11.32□□□□□ -0.6
PTPRU-202ENST00000373779 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
PTPRU-202ENST00000373779 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
PTPRU-202ENST00000373779 AKAP13Q12802 2813 aa11.3□□□□□ -0.6
PTPRU-202ENST00000373779 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
PTPRU-202ENST00000373779 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
PTPRU-202ENST00000373779 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
PTPRU-202ENST00000373779 ACYP2P14621 99 aa11.28□□□□□ -0.6
PTPRU-202ENST00000373779 A8MUN3 132 aa11.28□□□□□ -0.6
PTPRU-202ENST00000373779 FRYQ5TBA9 3013 aa11.27□□□□□ -0.6
PTPRU-202ENST00000373779 Q8NDZ9 215 aa11.27□□□□□ -0.61
PTPRU-202ENST00000373779 RTL8CO15255 209 aa11.26□□□□□ -0.61
PTPRU-202ENST00000373779 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
PTPRU-202ENST00000373779 SPINK1P00995 79 aa11.25□□□□□ -0.61
PTPRU-202ENST00000373779 COA5Q86WW8 74 aa11.24□□□□□ -0.61
PTPRU-202ENST00000373779 IGKV2D-30A0A075B6S6 120 aa11.24□□□□□ -0.61
PTPRU-202ENST00000373779 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
PTPRU-202ENST00000373779 OCR1Q9BZK8 76 aa11.24□□□□□ -0.61
PTPRU-202ENST00000373779 CYSTM1Q9H1C7 97 aa11.23□□□□□ -0.61
PTPRU-202ENST00000373779 CR1P17927 2039 aa11.23□□□□□ -0.61
PTPRU-202ENST00000373779 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
PTPRU-202ENST00000373779 A0A1B0GU69 56 aa11.22□□□□□ -0.61
PTPRU-202ENST00000373779 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
PTPRU-202ENST00000373779 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.62
PTPRU-202ENST00000373779 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
PTPRU-202ENST00000373779 K7EIL1 84 aa11.19□□□□□ -0.62
PTPRU-202ENST00000373779 ITPR3Q14573 2671 aa11.18□□□□□ -0.62
PTPRU-202ENST00000373779 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
PTPRU-202ENST00000373779 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
PTPRU-202ENST00000373779 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
PTPRU-202ENST00000373779 LINC00313P59037 77 aa11.17□□□□□ -0.62
PTPRU-202ENST00000373779 CENPEQ02224 2701 aa11.17□□□□□ -0.62
PTPRU-202ENST00000373779 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
PTPRU-202ENST00000373779 F8P00451 2351 aa11.15□□□□□ -0.63
PTPRU-202ENST00000373779 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
PTPRU-202ENST00000373779 SPRR4Q96PI1 79 aa11.13□□□□□ -0.63
PTPRU-202ENST00000373779 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
PTPRU-202ENST00000373779 DSCR10P59022 87 aa11.12□□□□□ -0.63
PTPRU-202ENST00000373779 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
PTPRU-202ENST00000373779 A0A1B0GVX0 72 aa11.11□□□□□ -0.63
PTPRU-202ENST00000373779 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
PTPRU-202ENST00000373779 FRYLO94915 3013 aa11.11□□□□□ -0.63
PTPRU-202ENST00000373779 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
PTPRU-202ENST00000373779 Q5XG85 94 aa11.1□□□□□ -0.63
PTPRU-202ENST00000373779 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
PTPRU-202ENST00000373779 WIPF1O43516 503 aa11.08□□□□□ -0.64
PTPRU-202ENST00000373779 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
PTPRU-202ENST00000373779 SPEGQ15772 3267 aa11.07□□□□□ -0.64
PTPRU-202ENST00000373779 ZNF861PO60384 105 aa11.04□□□□□ -0.64
PTPRU-202ENST00000373779 REV3LO60673 3130 aa11.03□□□□□ -0.64
PTPRU-202ENST00000373779 COL6A3P12111 3177 aa11.02□□□□□ -0.65
PTPRU-202ENST00000373779 ATRQ13535 2644 aa11.01□□□□□ -0.65
PTPRU-202ENST00000373779 Q1T7F1 81 aa11.01□□□□□ -0.65
PTPRU-202ENST00000373779 SPRR1AP35321 89 aa11□□□□□ -0.65
PTPRU-202ENST00000373779 APLNQ9ULZ1 77 aa11□□□□□ -0.65
PTPRU-202ENST00000373779 A0A087WTM6 91 aa10.99□□□□□ -0.65
PTPRU-202ENST00000373779 ATP11AUNQ6ZP68 121 aa10.99□□□□□ -0.65
PTPRU-202ENST00000373779 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
PTPRU-202ENST00000373779 TYMSOSQ8TAI1 123 aa10.98□□□□□ -0.65
PTPRU-202ENST00000373779 KALRNO60229 2985 aa10.98□□□□□ -0.65
PTPRU-202ENST00000373779 FP248Q71RG6 208 aaPredicted RBP10.98□□□□□ -0.65
PTPRU-202ENST00000373779 BOD1L1Q8NFC6 3051 aa10.97□□□□□ -0.65
PTPRU-202ENST00000373779 OXTP01178 125 aa10.96□□□□□ -0.65
PTPRU-202ENST00000373779 FAM229BQ4G0N7 80 aa10.96□□□□□ -0.65
PTPRU-202ENST00000373779 CFAP46Q8IYW2 2715 aa10.96□□□□□ -0.65
PTPRU-202ENST00000373779 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.66
PTPRU-202ENST00000373779 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.66
PTPRU-202ENST00000373779 MAP1AP78559 2803 aaPredicted RBP10.95□□□□□ -0.66
PTPRU-202ENST00000373779 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
PTPRU-202ENST00000373779 Q96NJ1 140 aa10.95□□□□□ -0.66
PTPRU-202ENST00000373779 KRTAP26-1Q6PEX3 210 aa10.95□□□□□ -0.66
PTPRU-202ENST00000373779 CHD6Q8TD26 2715 aa10.94□□□□□ -0.66
PTPRU-202ENST00000373779 FREM2Q5SZK8 3169 aa10.94□□□□□ -0.66
PTPRU-202ENST00000373779 USP24Q9UPU5 2620 aa10.92□□□□□ -0.66
PTPRU-202ENST00000373779 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
PTPRU-202ENST00000373779 GCN1Q92616 2671 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms