RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 Q9BRP9 147 aa12.42□□□□□ -0.42
TMEM54-202ENST00000373463 SPANXDQ9BXN6 97 aa12.42□□□□□ -0.42
TMEM54-202ENST00000373463 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
TMEM54-202ENST00000373463 AKR1D1P51857 326 aa12.41□□□□□ -0.42
TMEM54-202ENST00000373463 C3orf22Q8N5N4 141 aa12.41□□□□□ -0.42
TMEM54-202ENST00000373463 TRAV23DV6A0A075B6W5 121 aa12.4□□□□□ -0.42
TMEM54-202ENST00000373463 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
TMEM54-202ENST00000373463 S100A12P80511 92 aa12.39□□□□□ -0.43
TMEM54-202ENST00000373463 Q6ZRX8 168 aa12.39□□□□□ -0.43
TMEM54-202ENST00000373463 UBR4Q5T4S7 5183 aa12.39□□□□□ -0.43
TMEM54-202ENST00000373463 ZNF73O43830 326 aaPredicted RBP12.37□□□□□ -0.43
TMEM54-202ENST00000373463 TSPAN13O95857 204 aa12.37□□□□□ -0.43
TMEM54-202ENST00000373463 ZNF706Q9Y5V0 76 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-202ENST00000373463 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
TMEM54-202ENST00000373463 LINC00483Q53H64 154 aa12.33□□□□□ -0.44
TMEM54-202ENST00000373463 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
TMEM54-202ENST00000373463 OR13C6PQ8NH95 151 aa12.33□□□□□ -0.44
TMEM54-202ENST00000373463 LPAP08519 4548 aa12.32□□□□□ -0.44
TMEM54-202ENST00000373463 IFITM1P13164 125 aa12.32□□□□□ -0.44
TMEM54-202ENST00000373463 MUSTN1Q8IVN3 82 aa12.32□□□□□ -0.44
TMEM54-202ENST00000373463 Q6ZVH6 145 aa12.3□□□□□ -0.44
TMEM54-202ENST00000373463 LINC00518Q8N0U6 118 aa12.3□□□□□ -0.44
TMEM54-202ENST00000373463 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
TMEM54-202ENST00000373463 SCGB1D1O95968 90 aa12.28□□□□□ -0.44
TMEM54-202ENST00000373463 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.45
TMEM54-202ENST00000373463 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
TMEM54-202ENST00000373463 PRR4Q16378 134 aa12.26□□□□□ -0.45
TMEM54-202ENST00000373463 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
TMEM54-202ENST00000373463 CBY1Q9Y3M2 126 aa12.26□□□□□ -0.45
TMEM54-202ENST00000373463 C6orf99Q4VX62 202 aa12.25□□□□□ -0.45
TMEM54-202ENST00000373463 COPS9Q8WXC6 57 aa12.24□□□□□ -0.45
TMEM54-202ENST00000373463 ELOF1P60002 83 aaKnown RBP12.23□□□□□ -0.45
TMEM54-202ENST00000373463 Q8NBF4 154 aa12.22□□□□□ -0.45
TMEM54-202ENST00000373463 RETNLBQ9BQ08 111 aa12.22□□□□□ -0.45
TMEM54-202ENST00000373463 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.45
TMEM54-202ENST00000373463 COX7BP24311 80 aa12.2□□□□□ -0.46
TMEM54-202ENST00000373463 A6NDN8 102 aa12.19□□□□□ -0.46
TMEM54-202ENST00000373463 COX8AP10176 69 aa12.19□□□□□ -0.46
TMEM54-202ENST00000373463 IGLV9-49A0A0B4J1Y8 123 aa12.18□□□□□ -0.46
TMEM54-202ENST00000373463 CTAG1AP78358 180 aa12.18□□□□□ -0.46
TMEM54-202ENST00000373463 MOBPQ13875 183 aa12.18□□□□□ -0.46
TMEM54-202ENST00000373463 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
TMEM54-202ENST00000373463 A4D1N5 150 aa12.16□□□□□ -0.46
TMEM54-202ENST00000373463 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
TMEM54-202ENST00000373463 TRBV7-6A0A0J9YX20 115 aa12.15□□□□□ -0.46
TMEM54-202ENST00000373463 SPRR1BP22528 89 aa12.15□□□□□ -0.46
TMEM54-202ENST00000373463 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
TMEM54-202ENST00000373463 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
TMEM54-202ENST00000373463 DLEU1O43261 78 aa12.13□□□□□ -0.47
TMEM54-202ENST00000373463 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
TMEM54-202ENST00000373463 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
TMEM54-202ENST00000373463 SSBP3-AS1Q7Z2R9 100 aa12.12□□□□□ -0.47
TMEM54-202ENST00000373463 A0A1B0GWB2 263 aa12.11□□□□□ -0.47
TMEM54-202ENST00000373463 SPATA45Q537H7 98 aa12.11□□□□□ -0.47
TMEM54-202ENST00000373463 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
TMEM54-202ENST00000373463 C2orf91Q6ZV80 131 aa12.08□□□□□ -0.48
TMEM54-202ENST00000373463 HIST1H4GQ99525 98 aa12.08□□□□□ -0.48
TMEM54-202ENST00000373463 VAMP8Q9BV40 100 aa12.08□□□□□ -0.48
TMEM54-202ENST00000373463 SPINK1P00995 79 aa12.07□□□□□ -0.48
TMEM54-202ENST00000373463 LINC01547P58512 204 aaPredicted RBP12.07□□□□□ -0.48
TMEM54-202ENST00000373463 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
TMEM54-202ENST00000373463 C12orf57Q99622 126 aa12.07□□□□□ -0.48
TMEM54-202ENST00000373463 RNF213Q63HN8 5207 aa12.07□□□□□ -0.48
TMEM54-202ENST00000373463 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
TMEM54-202ENST00000373463 IGLV7-46A0A075B6I9 117 aa12.04□□□□□ -0.48
TMEM54-202ENST00000373463 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
TMEM54-202ENST00000373463 HIGD1BQ9P298 99 aa12.04□□□□□ -0.48
TMEM54-202ENST00000373463 TMA7Q9Y2S6 64 aaKnown RBP12.04□□□□□ -0.48
TMEM54-202ENST00000373463 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
TMEM54-202ENST00000373463 SMIM29Q86T20 159 aa12.03□□□□□ -0.48
TMEM54-202ENST00000373463 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
TMEM54-202ENST00000373463 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
TMEM54-202ENST00000373463 TAL2Q16559 108 aa12.01□□□□□ -0.49
TMEM54-202ENST00000373463 Q1RN00 199 aa12.01□□□□□ -0.49
TMEM54-202ENST00000373463 Q8N377 158 aa12.01□□□□□ -0.49
TMEM54-202ENST00000373463 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
TMEM54-202ENST00000373463 TPRXLQ17RH7 258 aa12□□□□□ -0.49
TMEM54-202ENST00000373463 LAMTOR3Q9UHA4 124 aa11.99□□□□□ -0.49
TMEM54-202ENST00000373463 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
TMEM54-202ENST00000373463 CFC1P0CG37 223 aa11.98□□□□□ -0.49
TMEM54-202ENST00000373463 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
TMEM54-202ENST00000373463 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
TMEM54-202ENST00000373463 NHP2Q9NX24 153 aaKnown RBP11.95□□□□□ -0.5
TMEM54-202ENST00000373463 VAMP3Q15836 100 aa11.93□□□□□ -0.5
TMEM54-202ENST00000373463 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
TMEM54-202ENST00000373463 KRTAP13-3Q3SY46 172 aa11.91□□□□□ -0.5
TMEM54-202ENST00000373463 HRCT1Q6UXD1 115 aa11.91□□□□□ -0.5
TMEM54-202ENST00000373463 CEND1Q8N111 149 aa11.91□□□□□ -0.5
TMEM54-202ENST00000373463 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
TMEM54-202ENST00000373463 H7C2G1 150 aa11.9□□□□□ -0.5
TMEM54-202ENST00000373463 SLC25A20O43772 301 aa11.9□□□□□ -0.5
TMEM54-202ENST00000373463 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
TMEM54-202ENST00000373463 FXYD2P54710 66 aa11.89□□□□□ -0.51
TMEM54-202ENST00000373463 Q6ZQY7 126 aa11.89□□□□□ -0.51
TMEM54-202ENST00000373463 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
TMEM54-202ENST00000373463 PRO1933Q9H354 126 aa11.88□□□□□ -0.51
TMEM54-202ENST00000373463 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
TMEM54-202ENST00000373463 RAB37Q96AX2 223 aa11.87□□□□□ -0.51
TMEM54-202ENST00000373463 CD164Q04900 197 aa11.85□□□□□ -0.51
TMEM54-202ENST00000373463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms