RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 UQCRQO14949 82 aa15.45■□□□□ 0.06
CDK9-201ENST00000373264 COX7CP15954 63 aa15.44■□□□□ 0.06
CDK9-201ENST00000373264 KRTAP7-1Q8IUC3 87 aa15.44■□□□□ 0.06
CDK9-201ENST00000373264 TENM2Q9NT68 2774 aa15.44■□□□□ 0.06
CDK9-201ENST00000373264 Q6ZVQ6 151 aa15.42■□□□□ 0.06
CDK9-201ENST00000373264 TRBV7-4A0A0J9YYF1 115 aa15.42■□□□□ 0.06
CDK9-201ENST00000373264 HAMPP81172 84 aa15.41■□□□□ 0.06
CDK9-201ENST00000373264 DEFB105AQ8NG35 78 aa15.41■□□□□ 0.06
CDK9-201ENST00000373264 DNAH9Q9NYC9 4486 aa15.41■□□□□ 0.06
CDK9-201ENST00000373264 KCNQ1DNQ9H478 68 aa15.4■□□□□ 0.06
CDK9-201ENST00000373264 UPK3BQ9BT76 320 aa15.39■□□□□ 0.05
CDK9-201ENST00000373264 LINC01547P58512 204 aaPredicted RBP15.39■□□□□ 0.05
CDK9-201ENST00000373264 SCXQ7RTU7 201 aa15.38■□□□□ 0.05
CDK9-201ENST00000373264 F8WDY8 70 aa15.37■□□□□ 0.05
CDK9-201ENST00000373264 KRTAP1-5Q9BYS1 174 aa15.37■□□□□ 0.05
CDK9-201ENST00000373264 CSMD3Q7Z407 3707 aa15.37■□□□□ 0.05
CDK9-201ENST00000373264 ATP5EP2Q5VTU8 51 aa15.37■□□□□ 0.05
CDK9-201ENST00000373264 TLX1NBP0CAT3 122 aa15.35■□□□□ 0.05
CDK9-201ENST00000373264 FAM19A5Q7Z5A7 132 aaPredicted RBP15.35■□□□□ 0.05
CDK9-201ENST00000373264 DNAH7Q8WXX0 4024 aa15.34■□□□□ 0.05
CDK9-201ENST00000373264 SERP2Q8N6R1 65 aa15.33■□□□□ 0.04
CDK9-201ENST00000373264 Q9BRP9 147 aa15.33■□□□□ 0.04
CDK9-201ENST00000373264 H3BQ85 93 aa15.32■□□□□ 0.04
CDK9-201ENST00000373264 GHRHP01286 108 aa15.32■□□□□ 0.04
CDK9-201ENST00000373264 Q8N377 158 aa15.32■□□□□ 0.04
CDK9-201ENST00000373264 PDE6GP18545 87 aa15.31■□□□□ 0.04
CDK9-201ENST00000373264 SMIM20Q8N5G0 67 aa15.31■□□□□ 0.04
CDK9-201ENST00000373264 IGLV1-50A0A075B6I6 118 aa15.3■□□□□ 0.04
CDK9-201ENST00000373264 ST20-AS1Q8NBB2 130 aa15.29■□□□□ 0.04
CDK9-201ENST00000373264 KRTAP4-16G5E9R7 235 aaPredicted RBP15.28■□□□□ 0.04
CDK9-201ENST00000373264 CRYGAP11844 174 aa15.28■□□□□ 0.04
CDK9-201ENST00000373264 Q6ZRX8 168 aa15.27■□□□□ 0.03
CDK9-201ENST00000373264 PLA2G2DQ9UNK4 145 aa15.26■□□□□ 0.03
CDK9-201ENST00000373264 ERC2-IT1O76042 136 aa15.25■□□□□ 0.03
CDK9-201ENST00000373264 RMI2Q96E14 147 aa15.25■□□□□ 0.03
CDK9-201ENST00000373264 C3orf84H3BNL1 204 aa15.23■□□□□ 0.03
CDK9-201ENST00000373264 MRPL55Q7Z7F7 128 aaKnown RBP15.23■□□□□ 0.03
CDK9-201ENST00000373264 Q8N9L7 120 aa15.22■□□□□ 0.03
CDK9-201ENST00000373264 IGLV5-37A0A075B6J1 123 aa15.22■□□□□ 0.03
CDK9-201ENST00000373264 ETDCA0A1B0GVM5 59 aa15.22■□□□□ 0.03
CDK9-201ENST00000373264 IGKV2-24A0A0C4DH68 120 aa15.21■□□□□ 0.02
CDK9-201ENST00000373264 SPRR1AP35321 89 aa15.21■□□□□ 0.02
CDK9-201ENST00000373264 LOC107984640A0A0U1RRK4 108 aa15.2■□□□□ 0.02
CDK9-201ENST00000373264 PRYO14603 147 aa15.19■□□□□ 0.02
CDK9-201ENST00000373264 A0A096LNI7 61 aa15.18■□□□□ 0.02
CDK9-201ENST00000373264 CXCL6P80162 114 aa15.18■□□□□ 0.02
CDK9-201ENST00000373264 MDFIQ99750 246 aa15.18■□□□□ 0.02
CDK9-201ENST00000373264 SRRM2Q9UQ35 2752 aaKnown RBP15.17■□□□□ 0.02
CDK9-201ENST00000373264 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.17■□□□□ 0.02
CDK9-201ENST00000373264 PLECQ15149 4684 aaKnown RBP15.17■□□□□ 0.02
CDK9-201ENST00000373264 DHRS4-AS1Q9P1J3 65 aa15.16■□□□□ 0.02
CDK9-201ENST00000373264 A0A1W2PNN7 141 aa15.14■□□□□ 0.01
CDK9-201ENST00000373264 UBE2BP63146 152 aa15.14■□□□□ 0.01
CDK9-201ENST00000373264 IGLV5-48A0A075B6I7 105 aa15.13■□□□□ 0.01
CDK9-201ENST00000373264 UBE2DNLQ8IWF7 75 aa15.13■□□□□ 0.01
CDK9-201ENST00000373264 PSCAO43653 123 aa15.12■□□□□ 0.01
CDK9-201ENST00000373264 A0A0G2JQZ4 141 aa15.12■□□□□ 0.01
CDK9-201ENST00000373264 APLNQ9ULZ1 77 aa15.12■□□□□ 0.01
CDK9-201ENST00000373264 C20orf197Q8N268 126 aa15.11■□□□□ 0.01
CDK9-201ENST00000373264 A0A1W2PNM2 257 aa15.1■□□□□ 0.01
CDK9-201ENST00000373264 BPY2O14599 106 aa15.1■□□□□ 0.01
CDK9-201ENST00000373264 CHTF8P0CG12 524 aa15.1■□□□□ 0.01
CDK9-201ENST00000373264 REG3GQ6UW15 175 aa15.1■□□□□ 0.01
CDK9-201ENST00000373264 NREPQ16612 68 aa15.09■□□□□ 0.01
CDK9-201ENST00000373264 DYNC2H1Q8NCM8 4307 aaKnown RBP15.08■□□□□ 0.01
CDK9-201ENST00000373264 PRLHP81277 87 aa15.08■□□□□ 0.01
CDK9-201ENST00000373264 TNP2Q05952 138 aa15.08■□□□□ 0
CDK9-201ENST00000373264 KRTAP11-1Q8IUC1 163 aa15.06■□□□□ 0
CDK9-201ENST00000373264 C1orf137Q5JT78 98 aa15.06■□□□□ 0
CDK9-201ENST00000373264 C16orf90A8MZG2 172 aa15.04■□□□□ -0
CDK9-201ENST00000373264 IGKV4-1P06312 121 aa15.03■□□□□ -0
CDK9-201ENST00000373264 CNBPP62633 177 aaKnown RBP15.02■□□□□ -0
CDK9-201ENST00000373264 TRAV7A0A075B6U4 112 aa15.01□□□□□ -0.01
CDK9-201ENST00000373264 SMIM29Q86T20 159 aa15.01□□□□□ -0.01
CDK9-201ENST00000373264 SNURFQ9Y675 71 aa15□□□□□ -0.01
CDK9-201ENST00000373264 STARD9Q9P2P6 4700 aa15□□□□□ -0.01
CDK9-201ENST00000373264 PHF5AQ7RTV0 110 aaKnown RBP14.99□□□□□ -0.01
CDK9-201ENST00000373264 FUSP35637 526 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDK9-201ENST00000373264 HIGD2AQ9BW72 106 aa14.98□□□□□ -0.01
CDK9-201ENST00000373264 PRKDCP78527 4128 aaKnown RBP14.97□□□□□ -0.01
CDK9-201ENST00000373264 TMEM258P61165 79 aa14.97□□□□□ -0.01
CDK9-201ENST00000373264 B9D2Q9BPU9 175 aa14.96□□□□□ -0.01
CDK9-201ENST00000373264 Q8NBF4 154 aa14.95□□□□□ -0.02
CDK9-201ENST00000373264 LINC00476Q8WZB0 136 aa14.93□□□□□ -0.02
CDK9-201ENST00000373264 PANO1I0J062 215 aa14.93□□□□□ -0.02
CDK9-201ENST00000373264 DPH3Q96FX2 82 aa14.93□□□□□ -0.02
CDK9-201ENST00000373264 OXTP01178 125 aa14.91□□□□□ -0.02
CDK9-201ENST00000373264 LRCOL1A6NCL2 159 aa14.91□□□□□ -0.02
CDK9-201ENST00000373264 BCE1O60756 84 aa14.91□□□□□ -0.02
CDK9-201ENST00000373264 H7BZZ5 65 aa14.88□□□□□ -0.03
CDK9-201ENST00000373264 NBDYA0A0U1RRE5 68 aa14.88□□□□□ -0.03
CDK9-201ENST00000373264 J3KT08 172 aa14.88□□□□□ -0.03
CDK9-201ENST00000373264 SPRR4Q96PI1 79 aa14.88□□□□□ -0.03
CDK9-201ENST00000373264 IGFL1Q6UW32 110 aa14.87□□□□□ -0.03
CDK9-201ENST00000373264 DEFB116Q30KQ4 102 aa14.85□□□□□ -0.03
CDK9-201ENST00000373264 EPM2AB3EWF7 344 aa14.84□□□□□ -0.03
CDK9-201ENST00000373264 Q6ZRN7 208 aaPredicted RBP14.84□□□□□ -0.03
CDK9-201ENST00000373264 C9orf163Q8N9P6 203 aa14.84□□□□□ -0.03
CDK9-201ENST00000373264 DSCR10P59022 87 aa14.83□□□□□ -0.04
CDK9-201ENST00000373264 KLKP1Q107X0 134 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms