RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
MMP9-201ENST00000372330 FAM30AQ9NZY2 134 aa12.2□□□□□ -0.46
MMP9-201ENST00000372330 SMIM29Q86T20 159 aa12.2□□□□□ -0.46
MMP9-201ENST00000372330 FN1P02751 2386 aaKnown RBP12.19□□□□□ -0.46
MMP9-201ENST00000372330 CYSRT1A8MQ03 144 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
MMP9-201ENST00000372330 ANGP03950 147 aaKnown RBP12.17□□□□□ -0.46
MMP9-201ENST00000372330 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
MMP9-201ENST00000372330 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
MMP9-201ENST00000372330 TENM1Q9UKZ4 2725 aa12.15□□□□□ -0.46
MMP9-201ENST00000372330 ETDCA0A1B0GVM5 59 aa12.15□□□□□ -0.46
MMP9-201ENST00000372330 PSCAO43653 123 aa12.15□□□□□ -0.46
MMP9-201ENST00000372330 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
MMP9-201ENST00000372330 NDUFB1O75438 58 aa12.14□□□□□ -0.47
MMP9-201ENST00000372330 NSD1Q96L73 2696 aaPredicted RBP12.14□□□□□ -0.47
MMP9-201ENST00000372330 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
MMP9-201ENST00000372330 X6R8D5 127 aa12.14□□□□□ -0.47
MMP9-201ENST00000372330 UBE2BP63146 152 aa12.13□□□□□ -0.47
MMP9-201ENST00000372330 SYCNQ0VAF6 134 aa12.12□□□□□ -0.47
MMP9-201ENST00000372330 HIVEP1P15822 2718 aa12.12□□□□□ -0.47
MMP9-201ENST00000372330 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
MMP9-201ENST00000372330 RETNQ9HD89 108 aa12.12□□□□□ -0.47
MMP9-201ENST00000372330 IGLV5-48A0A075B6I7 105 aa12.1□□□□□ -0.47
MMP9-201ENST00000372330 M0R378 163 aa12.1□□□□□ -0.47
MMP9-201ENST00000372330 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
MMP9-201ENST00000372330 A8MUN3 132 aa12.09□□□□□ -0.47
MMP9-201ENST00000372330 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.09□□□□□ -0.47
MMP9-201ENST00000372330 A0A096LPF7 62 aa12.08□□□□□ -0.48
MMP9-201ENST00000372330 VPREB1P12018 145 aa12.07□□□□□ -0.48
MMP9-201ENST00000372330 KTN1-AS1Q86SY8 53 aa12.07□□□□□ -0.48
MMP9-201ENST00000372330 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
MMP9-201ENST00000372330 KPRPQ5T749 579 aaPredicted RBP12.06□□□□□ -0.48
MMP9-201ENST00000372330 UBE2AP49459 152 aa12.06□□□□□ -0.48
MMP9-201ENST00000372330 Q5VV11 94 aa12.05□□□□□ -0.48
MMP9-201ENST00000372330 LIMD2Q9BT23 127 aa12.04□□□□□ -0.48
MMP9-201ENST00000372330 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
MMP9-201ENST00000372330 DEFB135Q30KP9 77 aa12.03□□□□□ -0.48
MMP9-201ENST00000372330 DEFB4AO15263 64 aa12□□□□□ -0.49
MMP9-201ENST00000372330 APOC4P55056 127 aa12□□□□□ -0.49
MMP9-201ENST00000372330 Q8N377 158 aa11.99□□□□□ -0.49
MMP9-201ENST00000372330 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
MMP9-201ENST00000372330 ATRQ13535 2644 aa11.99□□□□□ -0.49
MMP9-201ENST00000372330 TRRAPQ9Y4A5 3859 aa11.99□□□□□ -0.49
MMP9-201ENST00000372330 B9D2Q9BPU9 175 aa11.99□□□□□ -0.49
MMP9-201ENST00000372330 ATP11AUNQ6ZP68 121 aa11.98□□□□□ -0.49
MMP9-201ENST00000372330 NDUFS5O43920 106 aa11.98□□□□□ -0.49
MMP9-201ENST00000372330 DSCR10P59022 87 aa11.98□□□□□ -0.49
MMP9-201ENST00000372330 CHKB-CPT1BH3BT56 60 aa11.97□□□□□ -0.49
MMP9-201ENST00000372330 EGFEM1PQ0D2K5 195 aa11.97□□□□□ -0.49
MMP9-201ENST00000372330 PRR4Q16378 134 aa11.97□□□□□ -0.49
MMP9-201ENST00000372330 A0A1W2PNM2 257 aa11.97□□□□□ -0.49
MMP9-201ENST00000372330 RBM12B-AS1Q9P1G2 102 aa11.97□□□□□ -0.49
MMP9-201ENST00000372330 MP68P56378 58 aa11.96□□□□□ -0.49
MMP9-201ENST00000372330 ST20-AS1Q8NBB2 130 aa11.96□□□□□ -0.49
MMP9-201ENST00000372330 HCG22E2RYF7 251 aa11.95□□□□□ -0.5
MMP9-201ENST00000372330 SPANXA2-OT1Q8N9U9 137 aa11.95□□□□□ -0.5
MMP9-201ENST00000372330 Q8NBF4 154 aa11.95□□□□□ -0.5
MMP9-201ENST00000372330 C16orf90A8MZG2 172 aa11.95□□□□□ -0.5
MMP9-201ENST00000372330 Q8N9P0 234 aaPredicted RBP11.95□□□□□ -0.5
MMP9-201ENST00000372330 SPRR4Q96PI1 79 aa11.95□□□□□ -0.5
MMP9-201ENST00000372330 DEFB105AQ8NG35 78 aa11.94□□□□□ -0.5
MMP9-201ENST00000372330 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
MMP9-201ENST00000372330 K7EQZ3 153 aa11.93□□□□□ -0.5
MMP9-201ENST00000372330 Q8NAQ8 132 aa11.93□□□□□ -0.5
MMP9-201ENST00000372330 KCNQ1DNQ9H478 68 aa11.93□□□□□ -0.5
MMP9-201ENST00000372330 A8MU10 97 aa11.93□□□□□ -0.5
MMP9-201ENST00000372330 C1orf137Q5JT78 98 aa11.93□□□□□ -0.5
MMP9-201ENST00000372330 LELP1Q5T871 98 aa11.92□□□□□ -0.5
MMP9-201ENST00000372330 PHF5AQ7RTV0 110 aaKnown RBP11.92□□□□□ -0.5
MMP9-201ENST00000372330 CAMK2N2Q96S95 79 aa11.92□□□□□ -0.5
MMP9-201ENST00000372330 Q9BRP9 147 aa11.92□□□□□ -0.5
MMP9-201ENST00000372330 F8P00451 2351 aa11.91□□□□□ -0.5
MMP9-201ENST00000372330 LINC00208Q96KT6 92 aa11.91□□□□□ -0.5
MMP9-201ENST00000372330 TNP2Q05952 138 aa11.91□□□□□ -0.5
MMP9-201ENST00000372330 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
MMP9-201ENST00000372330 FLNBO75369 2602 aaKnown RBP11.9□□□□□ -0.5
MMP9-201ENST00000372330 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
MMP9-201ENST00000372330 H3BPC8 53 aa11.88□□□□□ -0.51
MMP9-201ENST00000372330 Q75L30 129 aa11.87□□□□□ -0.51
MMP9-201ENST00000372330 PRR15LQ9BU68 103 aa11.87□□□□□ -0.51
MMP9-201ENST00000372330 SPTSSBQ8NFR3 76 aa11.87□□□□□ -0.51
MMP9-201ENST00000372330 HTN3P15516 51 aa11.85□□□□□ -0.51
MMP9-201ENST00000372330 LOC101927531A0A1B0GV80 90 aa11.84□□□□□ -0.51
MMP9-201ENST00000372330 A6NN06 94 aa11.83□□□□□ -0.52
MMP9-201ENST00000372330 PRB2P02812 416 aaPredicted RBP11.83□□□□□ -0.52
MMP9-201ENST00000372330 LCA10Q71F78 164 aa11.82□□□□□ -0.52
MMP9-201ENST00000372330 Q6ZRX8 168 aa11.81□□□□□ -0.52
MMP9-201ENST00000372330 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
MMP9-201ENST00000372330 A6NED7 52 aa11.8□□□□□ -0.52
MMP9-201ENST00000372330 CDC42SE1Q9NRR8 79 aa11.78□□□□□ -0.52
MMP9-201ENST00000372330 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
MMP9-201ENST00000372330 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
MMP9-201ENST00000372330 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
MMP9-201ENST00000372330 IGKV2D-24A0A075B6R9 120 aa11.75□□□□□ -0.53
MMP9-201ENST00000372330 H0Y9P7 68 aa11.74□□□□□ -0.53
MMP9-201ENST00000372330 FBN1P35555 2871 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms