RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
TMEM53-202ENST00000372237 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
TMEM53-202ENST00000372237 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
TMEM53-202ENST00000372237 TRAV7A0A075B6U4 112 aa12.52□□□□□ -0.41
TMEM53-202ENST00000372237 TRAV10A0A0B4J240 114 aa12.51□□□□□ -0.41
TMEM53-202ENST00000372237 SERTAD4-AS1Q5TG53 156 aa12.5□□□□□ -0.41
TMEM53-202ENST00000372237 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
TMEM53-202ENST00000372237 TENM3Q9P273 2699 aa12.5□□□□□ -0.41
TMEM53-202ENST00000372237 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
TMEM53-202ENST00000372237 FAM19A5Q7Z5A7 132 aaPredicted RBP12.49□□□□□ -0.41
TMEM53-202ENST00000372237 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
TMEM53-202ENST00000372237 DNAH3Q8TD57 4116 aa12.48□□□□□ -0.41
TMEM53-202ENST00000372237 DEFB105AQ8NG35 78 aa12.46□□□□□ -0.41
TMEM53-202ENST00000372237 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
TMEM53-202ENST00000372237 TLX1NBP0CAT3 122 aa12.44□□□□□ -0.42
TMEM53-202ENST00000372237 Q8N377 158 aa12.43□□□□□ -0.42
TMEM53-202ENST00000372237 RPL37AP8A6NKH3 93 aa12.42□□□□□ -0.42
TMEM53-202ENST00000372237 NREPQ16612 68 aa12.42□□□□□ -0.42
TMEM53-202ENST00000372237 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
TMEM53-202ENST00000372237 KLKP1Q107X0 134 aa12.4□□□□□ -0.42
TMEM53-202ENST00000372237 PLA2G2DQ9UNK4 145 aa12.4□□□□□ -0.42
TMEM53-202ENST00000372237 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
TMEM53-202ENST00000372237 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
TMEM53-202ENST00000372237 OXTP01178 125 aa12.4□□□□□ -0.42
TMEM53-202ENST00000372237 FAM168BA1KXE4 195 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 H7BZZ5 65 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 Q6ZRX8 168 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 SNURFQ9Y675 71 aa12.39□□□□□ -0.43
TMEM53-202ENST00000372237 FAM236DA0A1B0GTK5 79 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 FAM236CP0DP71 79 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 Q8N9L7 120 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 IGLV5-48A0A075B6I7 105 aa12.38□□□□□ -0.43
TMEM53-202ENST00000372237 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
TMEM53-202ENST00000372237 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
TMEM53-202ENST00000372237 PRYO14603 147 aa12.37□□□□□ -0.43
TMEM53-202ENST00000372237 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
TMEM53-202ENST00000372237 Q9BRP9 147 aa12.36□□□□□ -0.43
TMEM53-202ENST00000372237 KRTAP4-16G5E9R7 235 aaPredicted RBP12.36□□□□□ -0.43
TMEM53-202ENST00000372237 BPY2O14599 106 aa12.36□□□□□ -0.43
TMEM53-202ENST00000372237 RMI2Q96E14 147 aa12.36□□□□□ -0.43
TMEM53-202ENST00000372237 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
TMEM53-202ENST00000372237 IGKV4-1P06312 121 aa12.34□□□□□ -0.43
TMEM53-202ENST00000372237 SPRR1AP35321 89 aa12.33□□□□□ -0.44
TMEM53-202ENST00000372237 FUSP35637 526 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM53-202ENST00000372237 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
TMEM53-202ENST00000372237 K7EIL1 84 aa12.31□□□□□ -0.44
TMEM53-202ENST00000372237 F8WEM9 126 aa12.3□□□□□ -0.44
TMEM53-202ENST00000372237 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
TMEM53-202ENST00000372237 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
TMEM53-202ENST00000372237 C1orf137Q5JT78 98 aa12.29□□□□□ -0.44
TMEM53-202ENST00000372237 A0A1B0GW54 56 aa12.27□□□□□ -0.44
TMEM53-202ENST00000372237 A0A1W2PNM2 257 aa12.27□□□□□ -0.44
TMEM53-202ENST00000372237 TNP2Q05952 138 aa12.27□□□□□ -0.44
TMEM53-202ENST00000372237 UBE2BP63146 152 aa12.26□□□□□ -0.45
TMEM53-202ENST00000372237 NDUFC1O43677 76 aa12.26□□□□□ -0.45
TMEM53-202ENST00000372237 MDFIQ99750 246 aa12.26□□□□□ -0.45
TMEM53-202ENST00000372237 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
TMEM53-202ENST00000372237 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
TMEM53-202ENST00000372237 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
TMEM53-202ENST00000372237 ERC2-IT1O76042 136 aa12.25□□□□□ -0.45
TMEM53-202ENST00000372237 Q8NBF4 154 aa12.23□□□□□ -0.45
TMEM53-202ENST00000372237 Q5XG85 94 aa12.22□□□□□ -0.45
TMEM53-202ENST00000372237 OCR1Q9BZK8 76 aa12.22□□□□□ -0.45
TMEM53-202ENST00000372237 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
TMEM53-202ENST00000372237 C5orf47Q569G3 176 aa12.21□□□□□ -0.45
TMEM53-202ENST00000372237 C4orf26Q17RF5 130 aa12.2□□□□□ -0.46
TMEM53-202ENST00000372237 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
TMEM53-202ENST00000372237 SPRR4Q96PI1 79 aa12.19□□□□□ -0.46
TMEM53-202ENST00000372237 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
TMEM53-202ENST00000372237 SMIM29Q86T20 159 aa12.15□□□□□ -0.46
TMEM53-202ENST00000372237 ATP5EP56381 51 aaPredicted RBP12.14□□□□□ -0.47
TMEM53-202ENST00000372237 IGKV2-24A0A0C4DH68 120 aa12.14□□□□□ -0.47
TMEM53-202ENST00000372237 A0A096LNI7 61 aa12.13□□□□□ -0.47
TMEM53-202ENST00000372237 A0A0U1RQV1 116 aa12.13□□□□□ -0.47
TMEM53-202ENST00000372237 HRCT1Q6UXD1 115 aa12.13□□□□□ -0.47
TMEM53-202ENST00000372237 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
TMEM53-202ENST00000372237 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
TMEM53-202ENST00000372237 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
TMEM53-202ENST00000372237 DSCR10P59022 87 aa12.11□□□□□ -0.47
TMEM53-202ENST00000372237 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
TMEM53-202ENST00000372237 PRLHP81277 87 aa12.1□□□□□ -0.47
TMEM53-202ENST00000372237 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
TMEM53-202ENST00000372237 PSCAO43653 123 aa12.1□□□□□ -0.47
TMEM53-202ENST00000372237 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
TMEM53-202ENST00000372237 K7EQZ3 153 aa12.09□□□□□ -0.47
TMEM53-202ENST00000372237 A0A1W2PNN7 141 aa12.08□□□□□ -0.48
TMEM53-202ENST00000372237 COL7A1Q02388 2944 aa12.08□□□□□ -0.48
TMEM53-202ENST00000372237 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
TMEM53-202ENST00000372237 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
TMEM53-202ENST00000372237 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
TMEM53-202ENST00000372237 IGFL1Q6UW32 110 aa12.06□□□□□ -0.48
TMEM53-202ENST00000372237 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
TMEM53-202ENST00000372237 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.04□□□□□ -0.48
TMEM53-202ENST00000372237 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
TMEM53-202ENST00000372237 LYSTQ99698 3801 aa12.01□□□□□ -0.49
TMEM53-202ENST00000372237 FP248Q71RG6 208 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms