RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
RAPGEF1-202ENST00000372190 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
RAPGEF1-202ENST00000372190 A0A0D9SG42 100 aa9.43□□□□□ -0.9
RAPGEF1-202ENST00000372190 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
RAPGEF1-202ENST00000372190 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
RAPGEF1-202ENST00000372190 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
RAPGEF1-202ENST00000372190 DOPEY1Q5JWR5 2465 aa9.41□□□□□ -0.9
RAPGEF1-202ENST00000372190 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
RAPGEF1-202ENST00000372190 PRAC1Q96KF2 57 aa9.41□□□□□ -0.9
RAPGEF1-202ENST00000372190 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
RAPGEF1-202ENST00000372190 UTRNP46939 3433 aa9.39□□□□□ -0.91
RAPGEF1-202ENST00000372190 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
RAPGEF1-202ENST00000372190 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
RAPGEF1-202ENST00000372190 J3QL48 77 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 USP9YO00507 2555 aaPredicted RBP9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 KRTAP1-1Q07627 177 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 Q5XG85 94 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 Q6ZRP5 223 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 LITAFQ99732 161 aa9.35□□□□□ -0.91
RAPGEF1-202ENST00000372190 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
RAPGEF1-202ENST00000372190 EPG5Q9HCE0 2579 aa9.34□□□□□ -0.91
RAPGEF1-202ENST00000372190 F8P00451 2351 aa9.33□□□□□ -0.92
RAPGEF1-202ENST00000372190 A0A1B0GVX0 72 aa9.33□□□□□ -0.92
RAPGEF1-202ENST00000372190 TYMSOSQ8TAI1 123 aa9.33□□□□□ -0.92
RAPGEF1-202ENST00000372190 IGLV5-48A0A075B6I7 105 aa9.32□□□□□ -0.92
RAPGEF1-202ENST00000372190 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
RAPGEF1-202ENST00000372190 POLQO75417 2590 aa9.31□□□□□ -0.92
RAPGEF1-202ENST00000372190 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
RAPGEF1-202ENST00000372190 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
RAPGEF1-202ENST00000372190 DSCR10P59022 87 aa9.29□□□□□ -0.92
RAPGEF1-202ENST00000372190 IGFL1Q6UW32 110 aa9.27□□□□□ -0.92
RAPGEF1-202ENST00000372190 ACANP16112 2415 aa9.27□□□□□ -0.93
RAPGEF1-202ENST00000372190 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
RAPGEF1-202ENST00000372190 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
RAPGEF1-202ENST00000372190 MTORP42345 2549 aa9.25□□□□□ -0.93
RAPGEF1-202ENST00000372190 SPINK7P58062 85 aa9.25□□□□□ -0.93
RAPGEF1-202ENST00000372190 A0A1B0GU33 70 aa9.25□□□□□ -0.93
RAPGEF1-202ENST00000372190 LINC01558Q9Y6Z2 57 aa9.25□□□□□ -0.93
RAPGEF1-202ENST00000372190 DNAH12Q6ZR08 3092 aa9.23□□□□□ -0.93
RAPGEF1-202ENST00000372190 PRR26Q8N8Z3 221 aa9.22□□□□□ -0.93
RAPGEF1-202ENST00000372190 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
RAPGEF1-202ENST00000372190 SETD2Q9BYW2 2564 aaPredicted RBP9.22□□□□□ -0.93
RAPGEF1-202ENST00000372190 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.93
RAPGEF1-202ENST00000372190 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
RAPGEF1-202ENST00000372190 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
RAPGEF1-202ENST00000372190 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
RAPGEF1-202ENST00000372190 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
RAPGEF1-202ENST00000372190 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
RAPGEF1-202ENST00000372190 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
RAPGEF1-202ENST00000372190 HECTD1Q9ULT8 2610 aa9.16□□□□□ -0.94
RAPGEF1-202ENST00000372190 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
RAPGEF1-202ENST00000372190 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
RAPGEF1-202ENST00000372190 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
RAPGEF1-202ENST00000372190 OBSCN-AS1Q96MR7 158 aa9.15□□□□□ -0.94
RAPGEF1-202ENST00000372190 Q5VV11 94 aa9.15□□□□□ -0.95
RAPGEF1-202ENST00000372190 Q8N1X5 172 aa9.15□□□□□ -0.95
RAPGEF1-202ENST00000372190 FAM229BQ4G0N7 80 aa9.14□□□□□ -0.95
RAPGEF1-202ENST00000372190 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
RAPGEF1-202ENST00000372190 A0A087WTM6 91 aa9.13□□□□□ -0.95
RAPGEF1-202ENST00000372190 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF1-202ENST00000372190 Q8N377 158 aa9.13□□□□□ -0.95
RAPGEF1-202ENST00000372190 ASB16-AS1Q495Z4 193 aa9.12□□□□□ -0.95
RAPGEF1-202ENST00000372190 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
RAPGEF1-202ENST00000372190 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
RAPGEF1-202ENST00000372190 FAM168BA1KXE4 195 aa9.1□□□□□ -0.95
RAPGEF1-202ENST00000372190 FLNBO75369 2602 aaKnown RBP9.09□□□□□ -0.95
RAPGEF1-202ENST00000372190 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
RAPGEF1-202ENST00000372190 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
RAPGEF1-202ENST00000372190 CASC10Q5T4H9 136 aa9.04□□□□□ -0.96
RAPGEF1-202ENST00000372190 ROMO1P60602 79 aa9.03□□□□□ -0.96
RAPGEF1-202ENST00000372190 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
RAPGEF1-202ENST00000372190 A0A1W2PNM2 257 aa9.02□□□□□ -0.97
RAPGEF1-202ENST00000372190 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
RAPGEF1-202ENST00000372190 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
RAPGEF1-202ENST00000372190 CHD7Q9P2D1 2997 aa8.98□□□□□ -0.97
RAPGEF1-202ENST00000372190 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
RAPGEF1-202ENST00000372190 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
RAPGEF1-202ENST00000372190 HRES1P13985 223 aa8.97□□□□□ -0.97
RAPGEF1-202ENST00000372190 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
RAPGEF1-202ENST00000372190 ZNF861PO60384 105 aa8.96□□□□□ -0.98
RAPGEF1-202ENST00000372190 HELZ2Q9BYK8 2649 aaKnown RBP8.93□□□□□ -0.98
RAPGEF1-202ENST00000372190 C5orf42Q9H799 3197 aa8.92□□□□□ -0.98
RAPGEF1-202ENST00000372190 TNP2Q05952 138 aa8.91□□□□□ -0.98
RAPGEF1-202ENST00000372190 CR1P17927 2039 aa8.9□□□□□ -0.98
RAPGEF1-202ENST00000372190 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
RAPGEF1-202ENST00000372190 CYSTM1Q9H1C7 97 aa8.89□□□□□ -0.99
RAPGEF1-202ENST00000372190 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
RAPGEF1-202ENST00000372190 HTTP42858 3142 aa8.87□□□□□ -0.99
RAPGEF1-202ENST00000372190 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
RAPGEF1-202ENST00000372190 PSORS1C2Q9UIG4 136 aa8.86□□□□□ -0.99
RAPGEF1-202ENST00000372190 H1FX-AS1Q4G0G2 97 aa8.85□□□□□ -0.99
RAPGEF1-202ENST00000372190 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
RAPGEF1-202ENST00000372190 OXTP01178 125 aa8.84□□□□□ -1
RAPGEF1-202ENST00000372190 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
RAPGEF1-202ENST00000372190 SPRR4Q96PI1 79 aa8.83□□□□□ -1
RAPGEF1-202ENST00000372190 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
RAPGEF1-202ENST00000372190 ITPR3Q14573 2671 aa8.81□□□□□ -1
RAPGEF1-202ENST00000372190 NDUFAF8A1L188 74 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms