RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 A0A087WVE0 104 aa13.36□□□□□ -0.27
VEGFA-204ENST00000372064 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
VEGFA-204ENST00000372064 SS18L2Q9UHA2 77 aa13.35□□□□□ -0.27
VEGFA-204ENST00000372064 UQCRQO14949 82 aa13.34□□□□□ -0.27
VEGFA-204ENST00000372064 IGLV5-37A0A075B6J1 123 aa13.34□□□□□ -0.27
VEGFA-204ENST00000372064 STAB2Q8WWQ8 2551 aa13.33□□□□□ -0.28
VEGFA-204ENST00000372064 COX7CP15954 63 aa13.31□□□□□ -0.28
VEGFA-204ENST00000372064 FAM168BA1KXE4 195 aa13.31□□□□□ -0.28
VEGFA-204ENST00000372064 Q6ZVQ6 151 aa13.28□□□□□ -0.28
VEGFA-204ENST00000372064 KRTAP7-1Q8IUC3 87 aa13.28□□□□□ -0.28
VEGFA-204ENST00000372064 IGLV1-50A0A075B6I6 118 aa13.27□□□□□ -0.29
VEGFA-204ENST00000372064 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
VEGFA-204ENST00000372064 MDFIQ99750 246 aa13.27□□□□□ -0.29
VEGFA-204ENST00000372064 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.29
VEGFA-204ENST00000372064 COL7A1Q02388 2944 aa13.27□□□□□ -0.29
VEGFA-204ENST00000372064 KRTAP4-16G5E9R7 235 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-204ENST00000372064 C9orf153Q5TBE3 101 aa13.26□□□□□ -0.29
VEGFA-204ENST00000372064 DNAH9Q9NYC9 4486 aa13.26□□□□□ -0.29
VEGFA-204ENST00000372064 RPL37AP8A6NKH3 93 aa13.26□□□□□ -0.29
VEGFA-204ENST00000372064 PRYO14603 147 aa13.26□□□□□ -0.29
VEGFA-204ENST00000372064 SPRR1AP35321 89 aa13.25□□□□□ -0.29
VEGFA-204ENST00000372064 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-204ENST00000372064 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
VEGFA-204ENST00000372064 Q6ZRX8 168 aa13.23□□□□□ -0.29
VEGFA-204ENST00000372064 LYSTQ99698 3801 aa13.23□□□□□ -0.29
VEGFA-204ENST00000372064 SERP2Q8N6R1 65 aa13.23□□□□□ -0.29
VEGFA-204ENST00000372064 DHRS4-AS1Q9P1J3 65 aa13.23□□□□□ -0.29
VEGFA-204ENST00000372064 CRYGAP11844 174 aa13.22□□□□□ -0.29
VEGFA-204ENST00000372064 CXCL6P80162 114 aa13.21□□□□□ -0.3
VEGFA-204ENST00000372064 Q8N377 158 aa13.21□□□□□ -0.3
VEGFA-204ENST00000372064 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-204ENST00000372064 Q9BRP9 147 aa13.2□□□□□ -0.3
VEGFA-204ENST00000372064 MRPL55Q7Z7F7 128 aaKnown RBP13.19□□□□□ -0.3
VEGFA-204ENST00000372064 APLNQ9ULZ1 77 aa13.19□□□□□ -0.3
VEGFA-204ENST00000372064 DNAH10Q8IVF4 4471 aa13.19□□□□□ -0.3
VEGFA-204ENST00000372064 HAMPP81172 84 aa13.19□□□□□ -0.3
VEGFA-204ENST00000372064 UBE2DNLQ8IWF7 75 aa13.19□□□□□ -0.3
VEGFA-204ENST00000372064 DYNC2H1Q8NCM8 4307 aaKnown RBP13.19□□□□□ -0.3
VEGFA-204ENST00000372064 DEFB105AQ8NG35 78 aa13.18□□□□□ -0.3
VEGFA-204ENST00000372064 ETDCA0A1B0GVM5 59 aa13.16□□□□□ -0.3
VEGFA-204ENST00000372064 IGLV5-48A0A075B6I7 105 aa13.16□□□□□ -0.3
VEGFA-204ENST00000372064 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
VEGFA-204ENST00000372064 CNBPP62633 177 aaKnown RBP13.14□□□□□ -0.31
VEGFA-204ENST00000372064 PSCAO43653 123 aa13.14□□□□□ -0.31
VEGFA-204ENST00000372064 BCE1O60756 84 aa13.11□□□□□ -0.31
VEGFA-204ENST00000372064 A0A096LNI7 61 aa13.1□□□□□ -0.31
VEGFA-204ENST00000372064 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
VEGFA-204ENST00000372064 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
VEGFA-204ENST00000372064 TNP2Q05952 138 aa13.09□□□□□ -0.31
VEGFA-204ENST00000372064 REG3GQ6UW15 175 aa13.09□□□□□ -0.31
VEGFA-204ENST00000372064 ST20-AS1Q8NBB2 130 aa13.09□□□□□ -0.31
VEGFA-204ENST00000372064 CYSTM1Q9H1C7 97 aa13.08□□□□□ -0.32
VEGFA-204ENST00000372064 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-204ENST00000372064 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
VEGFA-204ENST00000372064 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
VEGFA-204ENST00000372064 ERC2-IT1O76042 136 aa13.06□□□□□ -0.32
VEGFA-204ENST00000372064 SCXQ7RTU7 201 aa13.05□□□□□ -0.32
VEGFA-204ENST00000372064 A0A1W2PNN7 141 aa13.05□□□□□ -0.32
VEGFA-204ENST00000372064 UBE2BP63146 152 aa13.04□□□□□ -0.32
VEGFA-204ENST00000372064 DNAH7Q8WXX0 4024 aa13.04□□□□□ -0.32
VEGFA-204ENST00000372064 A0A1B0GW54 56 aa13.03□□□□□ -0.32
VEGFA-204ENST00000372064 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
VEGFA-204ENST00000372064 C14orf177Q52M58 125 aa13.02□□□□□ -0.32
VEGFA-204ENST00000372064 NREPQ16612 68 aa13.02□□□□□ -0.33
VEGFA-204ENST00000372064 C3orf84H3BNL1 204 aa13.01□□□□□ -0.33
VEGFA-204ENST00000372064 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
VEGFA-204ENST00000372064 TRAV7A0A075B6U4 112 aa13□□□□□ -0.33
VEGFA-204ENST00000372064 A0A1W2PNM2 257 aa13□□□□□ -0.33
VEGFA-204ENST00000372064 C1orf137Q5JT78 98 aa13□□□□□ -0.33
VEGFA-204ENST00000372064 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.333e-8■□□□□ 10.5
VEGFA-204ENST00000372064 CHTF8P0CG12 524 aa12.98□□□□□ -0.33
VEGFA-204ENST00000372064 NBDYA0A0U1RRE5 68 aa12.97□□□□□ -0.33
VEGFA-204ENST00000372064 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
VEGFA-204ENST00000372064 SMIM29Q86T20 159 aa12.97□□□□□ -0.33
VEGFA-204ENST00000372064 Q8NBF4 154 aa12.96□□□□□ -0.33
VEGFA-204ENST00000372064 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
VEGFA-204ENST00000372064 TMEM258P61165 79 aa12.95□□□□□ -0.34
VEGFA-204ENST00000372064 IGKV4-1P06312 121 aa12.95□□□□□ -0.34
VEGFA-204ENST00000372064 SPRR4Q96PI1 79 aa12.95□□□□□ -0.34
VEGFA-204ENST00000372064 PRLHP81277 87 aa12.95□□□□□ -0.34
VEGFA-204ENST00000372064 BPY2O14599 106 aa12.93□□□□□ -0.34
VEGFA-204ENST00000372064 Q8N9L7 120 aa12.92□□□□□ -0.34
VEGFA-204ENST00000372064 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
VEGFA-204ENST00000372064 C9orf163Q8N9P6 203 aa12.92□□□□□ -0.34
VEGFA-204ENST00000372064 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
VEGFA-204ENST00000372064 KRTAP11-1Q8IUC1 163 aa12.91□□□□□ -0.34
VEGFA-204ENST00000372064 C20orf197Q8N268 126 aa12.91□□□□□ -0.34
VEGFA-204ENST00000372064 PRKDCP78527 4128 aaKnown RBP12.89□□□□□ -0.35
VEGFA-204ENST00000372064 STARD9Q9P2P6 4700 aa12.88□□□□□ -0.35
VEGFA-204ENST00000372064 LINC00476Q8WZB0 136 aa12.88□□□□□ -0.35
VEGFA-204ENST00000372064 HIGD2AQ9BW72 106 aa12.88□□□□□ -0.35
VEGFA-204ENST00000372064 PKIGQ9Y2B9 76 aa12.88□□□□□ -0.35
VEGFA-204ENST00000372064 F8WEM9 126 aa12.86□□□□□ -0.35
VEGFA-204ENST00000372064 H0Y9J4 135 aa12.85□□□□□ -0.35
VEGFA-204ENST00000372064 IGLV8-61A0A075B6I0 122 aa12.85□□□□□ -0.35
VEGFA-204ENST00000372064 KLKP1Q107X0 134 aa12.85□□□□□ -0.35
VEGFA-204ENST00000372064 A0A0G2JQZ4 141 aa12.83□□□□□ -0.36
VEGFA-204ENST00000372064 PANO1I0J062 215 aa12.83□□□□□ -0.36
VEGFA-204ENST00000372064 RPS28P62857 69 aaKnown RBP12.83□□□□□ -0.36
VEGFA-204ENST00000372064 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms