RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 Q8N377 158 aa7.63□□□□□ -1.19
SMARCA1-201ENST00000371121 V9GYY9 64 aa7.63□□□□□ -1.19
SMARCA1-201ENST00000371121 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
SMARCA1-201ENST00000371121 Q6ZRU5 148 aa7.62□□□□□ -1.19
SMARCA1-201ENST00000371121 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
SMARCA1-201ENST00000371121 H3BQ85 93 aa7.61□□□□□ -1.19
SMARCA1-201ENST00000371121 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
SMARCA1-201ENST00000371121 DSCR10P59022 87 aa7.6□□□□□ -1.19
SMARCA1-201ENST00000371121 TNP2Q05952 138 aa7.59□□□□□ -1.19
SMARCA1-201ENST00000371121 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
SMARCA1-201ENST00000371121 ST20-AS1Q8NBB2 130 aa7.59□□□□□ -1.19
SMARCA1-201ENST00000371121 KRTAP10-3P60369 221 aa7.59□□□□□ -1.2
SMARCA1-201ENST00000371121 PIEZO1Q92508 2521 aa7.58□□□□□ -1.2
SMARCA1-201ENST00000371121 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
SMARCA1-201ENST00000371121 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
SMARCA1-201ENST00000371121 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-201ENST00000371121 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
SMARCA1-201ENST00000371121 HIGD2BQ4VC39 106 aa7.57□□□□□ -1.2
SMARCA1-201ENST00000371121 C15orf56Q8N910 161 aa7.57□□□□□ -1.2
SMARCA1-201ENST00000371121 Q9BRP9 147 aa7.56□□□□□ -1.2
SMARCA1-201ENST00000371121 DNAH9Q9NYC9 4486 aa7.56□□□□□ -1.2
SMARCA1-201ENST00000371121 PSPHP1O15172 72 aa7.56□□□□□ -1.2
SMARCA1-201ENST00000371121 CMC4P56277 68 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-201ENST00000371121 KPRPQ5T749 579 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-201ENST00000371121 K7EQZ3 153 aa7.55□□□□□ -1.2
SMARCA1-201ENST00000371121 KRTAP4-16G5E9R7 235 aaPredicted RBP7.55□□□□□ -1.2
SMARCA1-201ENST00000371121 M0R378 163 aa7.54□□□□□ -1.2
SMARCA1-201ENST00000371121 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
SMARCA1-201ENST00000371121 ACACBO00763 2458 aa7.54□□□□□ -1.2
SMARCA1-201ENST00000371121 FAM208BQ5VWN6 2430 aa7.54□□□□□ -1.2
SMARCA1-201ENST00000371121 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
SMARCA1-201ENST00000371121 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
SMARCA1-201ENST00000371121 MTORP42345 2549 aa7.53□□□□□ -1.2
SMARCA1-201ENST00000371121 LELP1Q5T871 98 aa7.53□□□□□ -1.2
SMARCA1-201ENST00000371121 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
SMARCA1-201ENST00000371121 PSCAO43653 123 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 Q8NAQ8 132 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 LYRM9A8MSI8 78 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 PRR4Q16378 134 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 DEFB135Q30KP9 77 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 KCNQ1DNQ9H478 68 aa7.52□□□□□ -1.21
SMARCA1-201ENST00000371121 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 KRTAP1-1Q07627 177 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 PMAIP1Q13794 54 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 ACANP16112 2415 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 TENM3Q9P273 2699 aa7.51□□□□□ -1.21
SMARCA1-201ENST00000371121 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
SMARCA1-201ENST00000371121 Q5VV11 94 aa7.5□□□□□ -1.21
SMARCA1-201ENST00000371121 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
SMARCA1-201ENST00000371121 DEFB113Q30KQ7 82 aa7.5□□□□□ -1.21
SMARCA1-201ENST00000371121 WFDC10BQ8IUB3 73 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 A8MUN3 132 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 EGFEM1PQ0D2K5 195 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
SMARCA1-201ENST00000371121 CAMK2N2Q96S95 79 aa7.48□□□□□ -1.21
SMARCA1-201ENST00000371121 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
SMARCA1-201ENST00000371121 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
SMARCA1-201ENST00000371121 FAM168BA1KXE4 195 aa7.47□□□□□ -1.21
SMARCA1-201ENST00000371121 HIVEP2P31629 2446 aa7.47□□□□□ -1.21
SMARCA1-201ENST00000371121 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
SMARCA1-201ENST00000371121 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
SMARCA1-201ENST00000371121 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.21
SMARCA1-201ENST00000371121 Q8NBF4 154 aa7.46□□□□□ -1.22
SMARCA1-201ENST00000371121 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
SMARCA1-201ENST00000371121 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
SMARCA1-201ENST00000371121 C1orf137Q5JT78 98 aa7.45□□□□□ -1.22
SMARCA1-201ENST00000371121 Q6ZRX8 168 aa7.45□□□□□ -1.22
SMARCA1-201ENST00000371121 SPRR1AP35321 89 aa7.44□□□□□ -1.22
SMARCA1-201ENST00000371121 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
SMARCA1-201ENST00000371121 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
SMARCA1-201ENST00000371121 TEP1Q99973 2627 aaKnown RBP7.43□□□□□ -1.22
SMARCA1-201ENST00000371121 HTN3P15516 51 aa7.43□□□□□ -1.22
SMARCA1-201ENST00000371121 FRAS1Q86XX4 4008 aa7.43□□□□□ -1.22
SMARCA1-201ENST00000371121 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
SMARCA1-201ENST00000371121 Q8N9P0 234 aaPredicted RBP7.41□□□□□ -1.22
SMARCA1-201ENST00000371121 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
SMARCA1-201ENST00000371121 HCG22E2RYF7 251 aa7.41□□□□□ -1.22
SMARCA1-201ENST00000371121 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.22
SMARCA1-201ENST00000371121 A0A1B0GW54 56 aa7.4□□□□□ -1.22
SMARCA1-201ENST00000371121 LCA10Q71F78 164 aa7.4□□□□□ -1.22
SMARCA1-201ENST00000371121 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
SMARCA1-201ENST00000371121 RPL37AP61513 92 aaKnown RBP7.37□□□□□ -1.23
SMARCA1-201ENST00000371121 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
SMARCA1-201ENST00000371121 CASC10Q5T4H9 136 aa7.36□□□□□ -1.23
SMARCA1-201ENST00000371121 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
SMARCA1-201ENST00000371121 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
SMARCA1-201ENST00000371121 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
SMARCA1-201ENST00000371121 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
SMARCA1-201ENST00000371121 B9D2Q9BPU9 175 aa7.35□□□□□ -1.23
SMARCA1-201ENST00000371121 DHRS4-AS1Q9P1J3 65 aa7.35□□□□□ -1.23
SMARCA1-201ENST00000371121 WFDC13Q8IUB5 93 aa7.34□□□□□ -1.23
SMARCA1-201ENST00000371121 SPART-AS1P0CW21 52 aa7.34□□□□□ -1.24
SMARCA1-201ENST00000371121 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.24
SMARCA1-201ENST00000371121 F8P00451 2351 aa7.33□□□□□ -1.24
SMARCA1-201ENST00000371121 IGLV5-37A0A075B6J1 123 aa7.33□□□□□ -1.24
SMARCA1-201ENST00000371121 CD164Q04900 197 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms