RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
LMO4-201ENST00000370542 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
LMO4-201ENST00000370542 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
LMO4-201ENST00000370542 LINC00846Q9NV44 126 aa9.97□□□□□ -0.81
LMO4-201ENST00000370542 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
LMO4-201ENST00000370542 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
LMO4-201ENST00000370542 EPM2AB3EWF7 344 aa9.96□□□□□ -0.82
LMO4-201ENST00000370542 TMEM256-PLSCR3K7ERE1 68 aa9.96□□□□□ -0.82
LMO4-201ENST00000370542 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
LMO4-201ENST00000370542 A0A087WYN8 130 aa9.95□□□□□ -0.82
LMO4-201ENST00000370542 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
LMO4-201ENST00000370542 LECT2O14960 151 aa9.95□□□□□ -0.82
LMO4-201ENST00000370542 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
LMO4-201ENST00000370542 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
LMO4-201ENST00000370542 GYPEP15421 78 aa9.94□□□□□ -0.82
LMO4-201ENST00000370542 Q9UF83 564 aa9.94□□□□□ -0.82
LMO4-201ENST00000370542 A0A087WZ39 114 aa9.93□□□□□ -0.82
LMO4-201ENST00000370542 WFDC10BQ8IUB3 73 aa9.93□□□□□ -0.82
LMO4-201ENST00000370542 UBL5Q9BZL1 73 aa9.93□□□□□ -0.82
LMO4-201ENST00000370542 A0A087WTM6 91 aa9.92□□□□□ -0.82
LMO4-201ENST00000370542 PDE6GP18545 87 aa9.91□□□□□ -0.82
LMO4-201ENST00000370542 HMCN2Q8NDA2 5059 aa9.9□□□□□ -0.82
LMO4-201ENST00000370542 IGHV3OR16-9A0A0B4J2B5 98 aa9.9□□□□□ -0.82
LMO4-201ENST00000370542 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
LMO4-201ENST00000370542 GHRHP01286 108 aa9.89□□□□□ -0.83
LMO4-201ENST00000370542 COX17Q14061 63 aa9.89□□□□□ -0.83
LMO4-201ENST00000370542 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
LMO4-201ENST00000370542 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
LMO4-201ENST00000370542 Q8IZM0 81 aa9.88□□□□□ -0.83
LMO4-201ENST00000370542 SERP1Q9Y6X1 66 aa9.88□□□□□ -0.83
LMO4-201ENST00000370542 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
LMO4-201ENST00000370542 NCR3O14931 201 aa9.87□□□□□ -0.83
LMO4-201ENST00000370542 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
LMO4-201ENST00000370542 ATP5EP56381 51 aaPredicted RBP9.87□□□□□ -0.83
LMO4-201ENST00000370542 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
LMO4-201ENST00000370542 Q8N814 137 aa9.87□□□□□ -0.83
LMO4-201ENST00000370542 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
LMO4-201ENST00000370542 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
LMO4-201ENST00000370542 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
LMO4-201ENST00000370542 SS18Q15532 418 aa9.86□□□□□ -0.83
LMO4-201ENST00000370542 C6orf226Q5I0X4 101 aa9.86□□□□□ -0.83
LMO4-201ENST00000370542 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
LMO4-201ENST00000370542 LOC110117498A0A087WWA1 95 aa9.85□□□□□ -0.83
LMO4-201ENST00000370542 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
LMO4-201ENST00000370542 NDUFC1O43677 76 aa9.85□□□□□ -0.83
LMO4-201ENST00000370542 A0A087WVE0 104 aa9.83□□□□□ -0.84
LMO4-201ENST00000370542 J3QL48 77 aa9.83□□□□□ -0.84
LMO4-201ENST00000370542 LELP1Q5T871 98 aa9.83□□□□□ -0.84
LMO4-201ENST00000370542 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
LMO4-201ENST00000370542 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
LMO4-201ENST00000370542 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
LMO4-201ENST00000370542 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
LMO4-201ENST00000370542 PFN2P35080 140 aa9.81□□□□□ -0.84
LMO4-201ENST00000370542 DSCR8Q96T75 97 aa9.81□□□□□ -0.84
LMO4-201ENST00000370542 XCL1P47992 114 aa9.8□□□□□ -0.84
LMO4-201ENST00000370542 CXCL6P80162 114 aa9.8□□□□□ -0.84
LMO4-201ENST00000370542 Q5VSD8 79 aa9.8□□□□□ -0.84
LMO4-201ENST00000370542 Q5XG85 94 aa9.8□□□□□ -0.84
LMO4-201ENST00000370542 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
LMO4-201ENST00000370542 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
LMO4-201ENST00000370542 SERTAD4-AS1Q5TG53 156 aa9.78□□□□□ -0.84
LMO4-201ENST00000370542 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
LMO4-201ENST00000370542 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
LMO4-201ENST00000370542 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
LMO4-201ENST00000370542 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
LMO4-201ENST00000370542 SLPIP03973 132 aa9.77□□□□□ -0.85
LMO4-201ENST00000370542 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 PSCAO43653 123 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 Q6ZQT0 140 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
LMO4-201ENST00000370542 ERC2-IT1O76042 136 aa9.74□□□□□ -0.85
LMO4-201ENST00000370542 OXTP01178 125 aa9.74□□□□□ -0.85
LMO4-201ENST00000370542 Q6ZSA8 131 aa9.73□□□□□ -0.85
LMO4-201ENST00000370542 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
LMO4-201ENST00000370542 Q8N3U1 123 aa9.73□□□□□ -0.85
LMO4-201ENST00000370542 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 H7BZZ5 65 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
LMO4-201ENST00000370542 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
LMO4-201ENST00000370542 HRCT1Q6UXD1 115 aa9.71□□□□□ -0.86
LMO4-201ENST00000370542 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
LMO4-201ENST00000370542 TRBV7-6A0A0J9YX20 115 aa9.69□□□□□ -0.86
LMO4-201ENST00000370542 LINC01547P58512 204 aaPredicted RBP9.69□□□□□ -0.86
LMO4-201ENST00000370542 LAMTOR3Q9UHA4 124 aa9.69□□□□□ -0.86
LMO4-201ENST00000370542 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
LMO4-201ENST00000370542 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
LMO4-201ENST00000370542 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
LMO4-201ENST00000370542 Q6ZVQ6 151 aa9.68□□□□□ -0.86
LMO4-201ENST00000370542 KRTAP29-1A8MX34 341 aaPredicted RBP9.67□□□□□ -0.86
LMO4-201ENST00000370542 HAMPP81172 84 aa9.67□□□□□ -0.86
LMO4-201ENST00000370542 KIAA0087Q14695 138 aa9.67□□□□□ -0.86
LMO4-201ENST00000370542 PLA2G2DQ9UNK4 145 aa9.65□□□□□ -0.86
LMO4-201ENST00000370542 RMI2Q96E14 147 aa9.64□□□□□ -0.87
LMO4-201ENST00000370542 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
LMO4-201ENST00000370542 IGLV6-57P01721 117 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms