RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 Q8N1X5 172 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 Q8TAT8 98 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 A0A087WYN8 130 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 A0A1B0GW54 56 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 LRCOL1A6NCL2 159 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 A8MWP4 228 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 ROMO1P60602 79 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 MOBPQ13875 183 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 Q6ZSN1 163 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 SPANXA2-OT1Q8N9U9 137 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 K7EIM0 57 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 KLK9Q2XQG4 91 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 KLK9Q9UKQ9 250 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 LYSTQ99698 3801 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
UBE3D-202ENST00000369746 CUBNO60494 3623 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 ARHGAP32A7KAX9 2087 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 IGHV3-74A0A0B4J1X5 117 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 MGPP08493 103 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 SMIM11BQ8TCY0 68 aa3.37□□□□□ -1.87
UBE3D-202ENST00000369746 TRBV10-1A0A0K0K1A3 114 aa3.36□□□□□ -1.87
UBE3D-202ENST00000369746 LECT2O14960 151 aa3.36□□□□□ -1.87
UBE3D-202ENST00000369746 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
UBE3D-202ENST00000369746 HECTD4Q9Y4D8 3996 aa3.36□□□□□ -1.87
UBE3D-202ENST00000369746 IGLV5-37A0A075B6J1 123 aa3.36□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP4-16G5E9R7 235 aaPredicted RBP3.36□□□□□ -1.87
UBE3D-202ENST00000369746 RPL36AP83881 106 aaKnown RBP3.35□□□□□ -1.87
UBE3D-202ENST00000369746 C10orf55Q5SWW7 151 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 CNTRLQ7Z7A1 2325 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 IGHV1-3A0A0C4DH29 117 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 ODF3BA8MYP8 253 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 M0QY20 66 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 NDPQ00604 133 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 C4orf3Q8WVX3 66 aa3.35□□□□□ -1.87
UBE3D-202ENST00000369746 H3BPC8 53 aa3.34□□□□□ -1.87
UBE3D-202ENST00000369746 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
UBE3D-202ENST00000369746 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
UBE3D-202ENST00000369746 RPL36ALQ969Q0 106 aaKnown RBP3.34□□□□□ -1.87
UBE3D-202ENST00000369746 IGKV2-28A0A075B6P5 120 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 LYNX1G3V0Z9 82 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 IGKV2D-28P01615 120 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 LYNX1P0DP58 116 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 RNASE3P12724 160 aaKnown RBP3.34□□□□□ -1.88
UBE3D-202ENST00000369746 HAMPP81172 84 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.88
UBE3D-202ENST00000369746 LYPD2Q6UXB3 125 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.88
UBE3D-202ENST00000369746 FAT2Q9NYQ8 4349 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV3-11P01762 117 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 VWFP04275 2813 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 ROS1P08922 2347 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 CADP27708 2225 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 SLURP1P55000 103 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 Q8NDZ9 215 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 PLAC8Q9NZF1 115 aa3.33□□□□□ -1.88
UBE3D-202ENST00000369746 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 IGLV11-55A0A075B6I3 123 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 TRBV6-4A0A1B0GX49 114 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV1-8P0DP01 117 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 PRR4Q16378 134 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 PRR14LQ5THK1 2151 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
UBE3D-202ENST00000369746 IGKV4-1P06312 121 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 HIGD2AQ9BW72 106 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 S4R3C0 116 aa3.32□□□□□ -1.88
UBE3D-202ENST00000369746 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 SMIM1B2RUZ4 78 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 P0C880 135 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 LEAP2Q969E1 77 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 H3BUX3 64 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 CNBPP62633 177 aaKnown RBP3.31□□□□□ -1.88
UBE3D-202ENST00000369746 HIGD2BQ4VC39 106 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 GAFA1Q96PS6 74 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 PRR15LQ9BU68 103 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 CDKN2A-AS1Q9UH64 79 aa3.31□□□□□ -1.88
UBE3D-202ENST00000369746 KRTAP29-1A8MX34 341 aaPredicted RBP3.3□□□□□ -1.88
UBE3D-202ENST00000369746 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 NPBQ8NG41 125 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 LINC00208Q96KT6 92 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 TGP01266 2768 aa3.3□□□□□ -1.88
UBE3D-202ENST00000369746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.29□□□□□ -1.88
UBE3D-202ENST00000369746 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
UBE3D-202ENST00000369746 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms