RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 H3BUT2 72 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 K7ERJ3 54 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 PSCAO43653 123 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 UBE2V1Q13404 147 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
SNX27-201ENST00000368838 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.51
SNX27-201ENST00000368838 K7EP34 96 aa5.65□□□□□ -1.51
SNX27-201ENST00000368838 COX6CP09669 75 aa5.65□□□□□ -1.51
SNX27-201ENST00000368838 C9orf116Q5BN46 136 aaPredicted RBP5.65□□□□□ -1.51
SNX27-201ENST00000368838 LINC00337Q8N6G1 96 aa5.65□□□□□ -1.51
SNX27-201ENST00000368838 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.51
SNX27-201ENST00000368838 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 H0YGX0 51 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 IGLV6-57P01721 117 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 VAMP3Q15836 100 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 Q6ZRP5 223 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
SNX27-201ENST00000368838 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
SNX27-201ENST00000368838 A0A1B0GX51 115 aa5.63□□□□□ -1.51
SNX27-201ENST00000368838 M0QXV9 152 aa5.63□□□□□ -1.51
SNX27-201ENST00000368838 WFDC2Q14508 124 aa5.63□□□□□ -1.51
SNX27-201ENST00000368838 SPCS1Q9Y6A9 102 aa5.63□□□□□ -1.51
SNX27-201ENST00000368838 M0R378 163 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 LECT2O14960 151 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 RPL13AP40429 203 aaKnown RBP5.62□□□□□ -1.51
SNX27-201ENST00000368838 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 Q8N814 137 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
SNX27-201ENST00000368838 NPC2P61916 151 aa5.61□□□□□ -1.51
SNX27-201ENST00000368838 LINC01620Q4KN68 170 aa5.61□□□□□ -1.51
SNX27-201ENST00000368838 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
SNX27-201ENST00000368838 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.6□□□□□ -1.51
SNX27-201ENST00000368838 F8W1H4 67 aa5.6□□□□□ -1.51
SNX27-201ENST00000368838 TRACP01848 142 aa5.6□□□□□ -1.51
SNX27-201ENST00000368838 LST1O00453 97 aa5.59□□□□□ -1.51
SNX27-201ENST00000368838 SDIM1Q6ZPB5 146 aa5.59□□□□□ -1.51
SNX27-201ENST00000368838 Q8NDZ9 215 aa5.59□□□□□ -1.51
SNX27-201ENST00000368838 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.51
SNX27-201ENST00000368838 PSMB2P49721 201 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 ATXN8Q156A1 80 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 Q1RN00 199 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
SNX27-201ENST00000368838 TCL1BO95988 128 aa5.57□□□□□ -1.52
SNX27-201ENST00000368838 SCGB1C2P0DMR2 95 aa5.57□□□□□ -1.52
SNX27-201ENST00000368838 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
SNX27-201ENST00000368838 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
SNX27-201ENST00000368838 H3BQ85 93 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 SPRR1AP35321 89 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 S100A7L2Q5SY68 101 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 LINC00167Q96N53 147 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 NAA38Q9BRA0 125 aaKnown RBP5.56□□□□□ -1.52
SNX27-201ENST00000368838 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
SNX27-201ENST00000368838 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
SNX27-201ENST00000368838 TRBV10-3A0A0K0K1G6 114 aa5.55□□□□□ -1.52
SNX27-201ENST00000368838 H3BT86 120 aa5.55□□□□□ -1.52
SNX27-201ENST00000368838 RPL18AQ02543 176 aaKnown RBP5.55□□□□□ -1.52
SNX27-201ENST00000368838 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
SNX27-201ENST00000368838 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
SNX27-201ENST00000368838 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 TRAV23DV6A0A075B6W5 121 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 A0A096LNI7 61 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 H3BMG7 143 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 H7C2G1 150 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 PRR3P79522 188 aaKnown RBP5.54□□□□□ -1.52
SNX27-201ENST00000368838 NKAPP1Q8N9T2 125 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 FAT3Q8TDW7 4589 aa5.54□□□□□ -1.52
SNX27-201ENST00000368838 KRTAP4-16G5E9R7 235 aaPredicted RBP5.53□□□□□ -1.52
SNX27-201ENST00000368838 ZNF73O43830 326 aaPredicted RBP5.53□□□□□ -1.52
SNX27-201ENST00000368838 SNCGO76070 127 aa5.53□□□□□ -1.52
SNX27-201ENST00000368838 ELOF1P60002 83 aaKnown RBP5.53□□□□□ -1.52
SNX27-201ENST00000368838 C6orf99Q4VX62 202 aa5.53□□□□□ -1.52
SNX27-201ENST00000368838 SCXQ7RTU7 201 aa5.53□□□□□ -1.52
SNX27-201ENST00000368838 MRPL55Q7Z7F7 128 aaKnown RBP5.53□□□□□ -1.52
SNX27-201ENST00000368838 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
SNX27-201ENST00000368838 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
SNX27-201ENST00000368838 NCR3O14931 201 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 OCIAD2Q56VL3 154 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 LINC00575Q6W349 94 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 DIRC1Q969H9 104 aa5.52□□□□□ -1.53
SNX27-201ENST00000368838 H0Y9J4 135 aa5.51□□□□□ -1.53
SNX27-201ENST00000368838 Q6ZSA8 131 aa5.51□□□□□ -1.53
SNX27-201ENST00000368838 SLC25A20O43772 301 aa5.5□□□□□ -1.53
SNX27-201ENST00000368838 ANKRD29Q8N6D5 301 aa5.5□□□□□ -1.53
SNX27-201ENST00000368838 PLAC8Q9NZF1 115 aa5.5□□□□□ -1.53
SNX27-201ENST00000368838 A0A1W2PNN7 141 aa5.49□□□□□ -1.53
SNX27-201ENST00000368838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.49□□□□□ -1.53
SNX27-201ENST00000368838 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
SNX27-201ENST00000368838 PPDPFLQ8WWR9 84 aa5.49□□□□□ -1.53
SNX27-201ENST00000368838 CLEC2BQ92478 149 aa5.49□□□□□ -1.53
SNX27-201ENST00000368838 FAM218AQ96MZ4 157 aa5.49□□□□□ -1.53
SNX27-201ENST00000368838 C9JAW5 83 aa5.48□□□□□ -1.53
SNX27-201ENST00000368838 DNAL4O96015 105 aa5.48□□□□□ -1.53
SNX27-201ENST00000368838 COX7BP24311 80 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms