RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
SF3B5-201ENST00000367569 PPDPFQ9H3Y8 114 aa8.63□□□□□ -1.03
SF3B5-201ENST00000367569 B5MCH6 92 aa8.62□□□□□ -1.03
SF3B5-201ENST00000367569 TSPAN13O95857 204 aa8.62□□□□□ -1.03
SF3B5-201ENST00000367569 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
SF3B5-201ENST00000367569 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
SF3B5-201ENST00000367569 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
SF3B5-201ENST00000367569 ERC2-IT1O76042 136 aa8.61□□□□□ -1.03
SF3B5-201ENST00000367569 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
SF3B5-201ENST00000367569 S100A12P80511 92 aa8.61□□□□□ -1.03
SF3B5-201ENST00000367569 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
SF3B5-201ENST00000367569 Q9BRP9 147 aa8.6□□□□□ -1.03
SF3B5-201ENST00000367569 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
SF3B5-201ENST00000367569 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
SF3B5-201ENST00000367569 ZNF73O43830 326 aaPredicted RBP8.58□□□□□ -1.04
SF3B5-201ENST00000367569 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
SF3B5-201ENST00000367569 Q6ZRX8 168 aa8.58□□□□□ -1.04
SF3B5-201ENST00000367569 AKR1D1P51857 326 aa8.57□□□□□ -1.04
SF3B5-201ENST00000367569 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
SF3B5-201ENST00000367569 MUC2Q02817 5179 aa8.56□□□□□ -1.04
SF3B5-201ENST00000367569 GAGE2AQ6NT46 116 aa8.56□□□□□ -1.04
SF3B5-201ENST00000367569 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
SF3B5-201ENST00000367569 ZNF706Q9Y5V0 76 aaPredicted RBP8.55□□□□□ -1.04
SF3B5-201ENST00000367569 LINC00304Q8N9R0 145 aa8.54□□□□□ -1.04
SF3B5-201ENST00000367569 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
SF3B5-201ENST00000367569 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
SF3B5-201ENST00000367569 PRR4Q16378 134 aa8.52□□□□□ -1.05
SF3B5-201ENST00000367569 C6orf99Q4VX62 202 aa8.52□□□□□ -1.05
SF3B5-201ENST00000367569 IGLV9-49A0A0B4J1Y8 123 aa8.51□□□□□ -1.05
SF3B5-201ENST00000367569 A6NDN8 102 aa8.51□□□□□ -1.05
SF3B5-201ENST00000367569 IFITM1P13164 125 aa8.51□□□□□ -1.05
SF3B5-201ENST00000367569 PAM16Q9Y3D7 125 aa8.51□□□□□ -1.05
SF3B5-201ENST00000367569 C12orf57Q99622 126 aa8.5□□□□□ -1.05
SF3B5-201ENST00000367569 MOBPQ13875 183 aa8.49□□□□□ -1.05
SF3B5-201ENST00000367569 LINC00518Q8N0U6 118 aa8.49□□□□□ -1.05
SF3B5-201ENST00000367569 Q8NBF4 154 aa8.49□□□□□ -1.05
SF3B5-201ENST00000367569 COX7BP24311 80 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
SF3B5-201ENST00000367569 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 Q6ZVH6 145 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 C14orf144Q96I85 54 aa8.48□□□□□ -1.05
SF3B5-201ENST00000367569 COX8AP10176 69 aa8.47□□□□□ -1.05
SF3B5-201ENST00000367569 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
SF3B5-201ENST00000367569 A4D1N5 150 aa8.46□□□□□ -1.06
SF3B5-201ENST00000367569 ELOF1P60002 83 aaKnown RBP8.46□□□□□ -1.06
SF3B5-201ENST00000367569 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
SF3B5-201ENST00000367569 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
SF3B5-201ENST00000367569 C9orf153Q5TBE3 101 aa8.45□□□□□ -1.06
SF3B5-201ENST00000367569 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
SF3B5-201ENST00000367569 HIST1H4GQ99525 98 aa8.44□□□□□ -1.06
SF3B5-201ENST00000367569 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
SF3B5-201ENST00000367569 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
SF3B5-201ENST00000367569 DHRS4-AS1Q9P1J3 65 aa8.42□□□□□ -1.06
SF3B5-201ENST00000367569 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
SF3B5-201ENST00000367569 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
SF3B5-201ENST00000367569 A0A1B0GWB2 263 aa8.39□□□□□ -1.07
SF3B5-201ENST00000367569 Q1RN00 199 aa8.39□□□□□ -1.07
SF3B5-201ENST00000367569 H7C2G1 150 aa8.38□□□□□ -1.07
SF3B5-201ENST00000367569 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
SF3B5-201ENST00000367569 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
SF3B5-201ENST00000367569 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
SF3B5-201ENST00000367569 DLEU1O43261 78 aa8.37□□□□□ -1.07
SF3B5-201ENST00000367569 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
SF3B5-201ENST00000367569 TAL2Q16559 108 aa8.36□□□□□ -1.07
SF3B5-201ENST00000367569 FAT4Q6V0I7 4981 aa8.35□□□□□ -1.07
SF3B5-201ENST00000367569 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
SF3B5-201ENST00000367569 HRCT1Q6UXD1 115 aa8.35□□□□□ -1.07
SF3B5-201ENST00000367569 SPRR1BP22528 89 aa8.34□□□□□ -1.07
SF3B5-201ENST00000367569 LINC01547P58512 204 aaPredicted RBP8.33□□□□□ -1.08
SF3B5-201ENST00000367569 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
SF3B5-201ENST00000367569 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
SF3B5-201ENST00000367569 A0A0G2JQZ4 141 aa8.32□□□□□ -1.08
SF3B5-201ENST00000367569 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
SF3B5-201ENST00000367569 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
SF3B5-201ENST00000367569 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
SF3B5-201ENST00000367569 CFC1P0CG37 223 aa8.31□□□□□ -1.08
SF3B5-201ENST00000367569 RAB37Q96AX2 223 aa8.31□□□□□ -1.08
SF3B5-201ENST00000367569 TEX49A0A1B0GTD5 131 aa8.3□□□□□ -1.08
SF3B5-201ENST00000367569 SPINK1P00995 79 aa8.3□□□□□ -1.08
SF3B5-201ENST00000367569 FXYD2P54710 66 aa8.3□□□□□ -1.08
SF3B5-201ENST00000367569 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
SF3B5-201ENST00000367569 IGLV5-48A0A075B6I7 105 aa8.29□□□□□ -1.08
SF3B5-201ENST00000367569 A0A0U1RQV1 116 aa8.29□□□□□ -1.08
SF3B5-201ENST00000367569 LINC00575Q6W349 94 aa8.29□□□□□ -1.08
SF3B5-201ENST00000367569 CEND1Q8N111 149 aa8.29□□□□□ -1.08
SF3B5-201ENST00000367569 SLC25A20O43772 301 aa8.28□□□□□ -1.08
SF3B5-201ENST00000367569 VAMP3Q15836 100 aa8.28□□□□□ -1.08
SF3B5-201ENST00000367569 Q6ZQY7 126 aa8.28□□□□□ -1.08
SF3B5-201ENST00000367569 Q8N377 158 aa8.28□□□□□ -1.08
SF3B5-201ENST00000367569 NHP2Q9NX24 153 aaKnown RBP8.28□□□□□ -1.08
SF3B5-201ENST00000367569 A0A0B4J2C4 111 aa8.26□□□□□ -1.09
SF3B5-201ENST00000367569 hADV29S1A0JD25 119 aa8.26□□□□□ -1.09
SF3B5-201ENST00000367569 K7ERJ3 54 aa8.26□□□□□ -1.09
SF3B5-201ENST00000367569 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
SF3B5-201ENST00000367569 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
SF3B5-201ENST00000367569 CDIP1Q9H305 208 aa8.24□□□□□ -1.09
SF3B5-201ENST00000367569 CTAG1AP78358 180 aa8.23□□□□□ -1.09
SF3B5-201ENST00000367569 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms