RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 S100A12P80511 92 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 Q6ZRX8 168 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
TNFRSF1A-202ENST00000366159 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
TNFRSF1A-202ENST00000366159 LITAFQ99732 161 aa7.76□□□□□ -1.17
TNFRSF1A-202ENST00000366159 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
TNFRSF1A-202ENST00000366159 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
TNFRSF1A-202ENST00000366159 MIEN1Q9BRT3 115 aa7.75□□□□□ -1.17
TNFRSF1A-202ENST00000366159 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
TNFRSF1A-202ENST00000366159 SPINK1P00995 79 aa7.74□□□□□ -1.17
TNFRSF1A-202ENST00000366159 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
TNFRSF1A-202ENST00000366159 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
TNFRSF1A-202ENST00000366159 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
TNFRSF1A-202ENST00000366159 SSBP3-AS1Q7Z2R9 100 aa7.73□□□□□ -1.17
TNFRSF1A-202ENST00000366159 ZNF73O43830 326 aaPredicted RBP7.72□□□□□ -1.17
TNFRSF1A-202ENST00000366159 NPC2P61916 151 aa7.72□□□□□ -1.17
TNFRSF1A-202ENST00000366159 A0A0U1RQV1 116 aa7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 TIMM17BO60830 172 aa7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 RPS29P62273 56 aaKnown RBP7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
TNFRSF1A-202ENST00000366159 MOBPQ13875 183 aa7.7□□□□□ -1.18
TNFRSF1A-202ENST00000366159 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
TNFRSF1A-202ENST00000366159 IGLV9-49A0A0B4J1Y8 123 aa7.69□□□□□ -1.18
TNFRSF1A-202ENST00000366159 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
TNFRSF1A-202ENST00000366159 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
TNFRSF1A-202ENST00000366159 Q8N377 158 aa7.69□□□□□ -1.18
TNFRSF1A-202ENST00000366159 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
TNFRSF1A-202ENST00000366159 C3orf79P0CE67 100 aa7.68□□□□□ -1.18
TNFRSF1A-202ENST00000366159 TTTY13Q9BZ97 58 aa7.68□□□□□ -1.18
TNFRSF1A-202ENST00000366159 ST20-AS1Q8NBB2 130 aa7.67□□□□□ -1.18
TNFRSF1A-202ENST00000366159 CBY1Q9Y3M2 126 aa7.66□□□□□ -1.18
TNFRSF1A-202ENST00000366159 ZNF815PA8K554 130 aa7.65□□□□□ -1.18
TNFRSF1A-202ENST00000366159 SPRR1BP22528 89 aa7.65□□□□□ -1.18
TNFRSF1A-202ENST00000366159 SLC25A20O43772 301 aa7.63□□□□□ -1.19
TNFRSF1A-202ENST00000366159 ASB16-AS1Q495Z4 193 aa7.63□□□□□ -1.19
TNFRSF1A-202ENST00000366159 SPANXDQ9BXN6 97 aa7.63□□□□□ -1.19
TNFRSF1A-202ENST00000366159 HINT1P49773 126 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF1A-202ENST00000366159 OR13C6PQ8NH95 151 aa7.62□□□□□ -1.19
TNFRSF1A-202ENST00000366159 ELOF1P60002 83 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-202ENST00000366159 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
TNFRSF1A-202ENST00000366159 DHRS4-AS1Q9P1J3 65 aa7.61□□□□□ -1.19
TNFRSF1A-202ENST00000366159 KRTDAPP60985 99 aa7.6□□□□□ -1.19
TNFRSF1A-202ENST00000366159 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
TNFRSF1A-202ENST00000366159 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
TNFRSF1A-202ENST00000366159 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
TNFRSF1A-202ENST00000366159 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
TNFRSF1A-202ENST00000366159 COX7BP24311 80 aa7.57□□□□□ -1.2
TNFRSF1A-202ENST00000366159 IFITM1P13164 125 aa7.56□□□□□ -1.2
TNFRSF1A-202ENST00000366159 XP32Q5T750 250 aa7.56□□□□□ -1.2
TNFRSF1A-202ENST00000366159 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
TNFRSF1A-202ENST00000366159 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
TNFRSF1A-202ENST00000366159 Q6ZVH6 145 aa7.55□□□□□ -1.2
TNFRSF1A-202ENST00000366159 C20orf202A1L168 122 aa7.54□□□□□ -1.2
TNFRSF1A-202ENST00000366159 PCP2Q8IVA1 136 aa7.54□□□□□ -1.2
TNFRSF1A-202ENST00000366159 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
TNFRSF1A-202ENST00000366159 LINC01547P58512 204 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 KRTAP9-2Q9BYQ4 174 aa7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
TNFRSF1A-202ENST00000366159 AKR1D1P51857 326 aa7.52□□□□□ -1.2
TNFRSF1A-202ENST00000366159 COPS9Q8WXC6 57 aa7.52□□□□□ -1.2
TNFRSF1A-202ENST00000366159 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
TNFRSF1A-202ENST00000366159 TEX49A0A1B0GTD5 131 aa7.52□□□□□ -1.21
TNFRSF1A-202ENST00000366159 A0A1B0GWB2 263 aa7.52□□□□□ -1.21
TNFRSF1A-202ENST00000366159 CD164Q04900 197 aa7.51□□□□□ -1.21
TNFRSF1A-202ENST00000366159 TAL2Q16559 108 aa7.51□□□□□ -1.21
TNFRSF1A-202ENST00000366159 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-202ENST00000366159 Q1RN00 199 aa7.5□□□□□ -1.21
TNFRSF1A-202ENST00000366159 HRCT1Q6UXD1 115 aa7.5□□□□□ -1.21
TNFRSF1A-202ENST00000366159 DEFB105AQ8NG35 78 aa7.5□□□□□ -1.21
TNFRSF1A-202ENST00000366159 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
TNFRSF1A-202ENST00000366159 A6NDN8 102 aa7.49□□□□□ -1.21
TNFRSF1A-202ENST00000366159 S100A1P23297 94 aa7.49□□□□□ -1.21
TNFRSF1A-202ENST00000366159 HIST3H2BBQ8N257 126 aa7.49□□□□□ -1.21
TNFRSF1A-202ENST00000366159 Q5XG85 94 aa7.48□□□□□ -1.21
TNFRSF1A-202ENST00000366159 PRO1933Q9H354 126 aa7.48□□□□□ -1.21
TNFRSF1A-202ENST00000366159 TRAV13-2A0A0B4J235 113 aa7.47□□□□□ -1.21
TNFRSF1A-202ENST00000366159 A4D1N5 150 aa7.47□□□□□ -1.21
TNFRSF1A-202ENST00000366159 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
TNFRSF1A-202ENST00000366159 HIST1H2BLQ99880 126 aa7.47□□□□□ -1.21
TNFRSF1A-202ENST00000366159 H7C2G1 150 aa7.44□□□□□ -1.22
TNFRSF1A-202ENST00000366159 A0A0G2JQZ4 141 aa7.43□□□□□ -1.22
TNFRSF1A-202ENST00000366159 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
TNFRSF1A-202ENST00000366159 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
TNFRSF1A-202ENST00000366159 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
TNFRSF1A-202ENST00000366159 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms