RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 DPH3Q96FX2 82 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 DSCR8Q96T75 97 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 LITAFQ99732 161 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 UPK3BQ9BT76 320 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 UBL5Q9BZL1 73 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 LAMTOR3Q9UHA4 124 aa1.02□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGKV2D-24A0A075B6R9 120 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 TRBV7-6A0A0J9YX20 115 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 TRBV7-7A0A0K0K1E9 115 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 TRBV10-3A0A0K0K1G6 114 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 LOC107984640A0A0U1RRK4 108 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 A0A1B0GW54 56 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 hADV29S1A0JD25 119 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 SMIM1B2RUZ4 78 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 H3BNG1 76 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 ZNF561-AS1K7EIQ3 104 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 ATOX1O00244 68 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 NDUFC2O95298 119 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 ANGP03950 147 aaKnown RBP1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 PLA2G1BP04054 148 aaKnown RBP1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00694P0DN24 101 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 COX7CP15954 63 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 XCL1P47992 114 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 HIST1H4AP62805 103 aaKnown RBP1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 C9orf153Q5TBE3 101 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 SCXQ7RTU7 201 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 Q8IZM0 81 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00269Q8N2A0 174 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 SERP2Q8N6R1 65 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 SVIPQ8NHG7 77 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 CIRBP-AS1Q8TBR5 109 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 SMIM11BQ8TCY0 68 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 OBSCN-AS1Q96MR7 158 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 KLK12Q9UKR0 248 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 FAT1Q14517 4588 aa1.01□□□□□ -2.25
RNU1-42P-201ENST00000364033 HMCN2Q8NDA2 5059 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 VPS13BQ7Z7G8 4022 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 MYCBP2O75592 4640 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGLV4-60A0A075B6I1 120 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 KRTAP29-1A8MX34 341 aaPredicted RBP1□□□□□ -2.25
RNU1-42P-201ENST00000364033 NDUFC2-KCTD14E9PQ53 114 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 CCDC179H3BU77 68 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 PANO1I0J062 215 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 M0R378 163 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 NDUFC1O43677 76 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 EIF4EBP3O60516 100 aaPredicted RBP1□□□□□ -2.25
RNU1-42P-201ENST00000364033 SLPIP03973 132 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 CRYGAP11844 174 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 COX7BP24311 80 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 RPL37AP61513 92 aaKnown RBP1□□□□□ -2.25
RNU1-42P-201ENST00000364033 PRR3P79522 188 aaKnown RBP1□□□□□ -2.25
RNU1-42P-201ENST00000364033 REG3AQ06141 175 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 NREPQ16612 68 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC01556Q5JQF7 62 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 LELP1Q5T871 98 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 ATP5EP2Q5VTU8 51 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 Q6JHZ5 121 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 CLPSL2Q6UWE3 100 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 ENHOQ6UWT2 76 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00575Q6W349 94 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 SDIM1Q6ZPB5 146 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 CHCHD10Q8WYQ3 142 aaPredicted RBP1□□□□□ -2.25
RNU1-42P-201ENST00000364033 C14orf132Q9NPU4 83 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 SS18L2Q9UHA2 77 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 PLA2G2DQ9UNK4 145 aa1□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGLV10-54A0A075B6I4 117 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGKV2-28A0A075B6P5 120 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 TRAV7A0A075B6U4 112 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 LOC110117498A0A087WWA1 95 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 A0A087WYN8 130 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 GVQW2A0A096LPI5 108 aaPredicted RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGKV3D-7A0A0C4DH55 119 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 FAM236AA0A1B0GUQ0 79 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 FAM236BA0A1B0GV22 79 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 USP17L23D6RBM5 183 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 J3KT08 172 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 NCR3O14931 201 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGKV2D-28P01615 120 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 CHTF8P0CG12 524 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 CXCL6P80162 114 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 RPL18AQ02543 176 aaKnown RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 KIAA0087Q14695 138 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 HIGD2BQ4VC39 106 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 SERTAD4-AS1Q5TG53 156 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 UNQ6190/PRO20217Q6UXQ8 127 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 SOSTDC1Q6X4U4 206 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00337Q8N6G1 96 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 RMI2Q96E14 147 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 C2orf48Q96LS8 159 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00167Q96N53 147 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 LINC00846Q9NV44 126 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 DHRS4-AS1Q9P1J3 65 aa0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP0.99□□□□□ -2.25
RNU1-42P-201ENST00000364033 LRP1Q07954 4544 aaKnown RBP0.98□□□□□ -2.25
RNU1-42P-201ENST00000364033 TRAV23DV6A0A075B6W5 121 aa0.98□□□□□ -2.25
RNU1-42P-201ENST00000364033 SMIM26A0A096LP01 95 aa0.98□□□□□ -2.25
RNU1-42P-201ENST00000364033 IGKV2-24A0A0C4DH68 120 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms