RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PKD1L1Q8TDX9 2849 aa12.72□□□□□ -0.37
CMTM3-201ENST00000361909 IGKV4-1P06312 121 aa12.71□□□□□ -0.37
CMTM3-201ENST00000361909 F8WDY8 70 aa12.7□□□□□ -0.38
CMTM3-201ENST00000361909 CELA1Q9UNI1 258 aa12.7□□□□□ -0.38
CMTM3-201ENST00000361909 A0A096LPF7 62 aa12.69□□□□□ -0.38
CMTM3-201ENST00000361909 FUSP35637 526 aaKnown RBP eCLIP12.69□□□□□ -0.38
CMTM3-201ENST00000361909 ESRGQ1W209 222 aa12.69□□□□□ -0.38
CMTM3-201ENST00000361909 ANK2Q01484 3957 aa12.68□□□□□ -0.38
CMTM3-201ENST00000361909 SPART-AS1P0CW21 52 aa12.67□□□□□ -0.38
CMTM3-201ENST00000361909 KPRPQ5T749 579 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-201ENST00000361909 BRK1Q8WUW1 75 aa12.67□□□□□ -0.38
CMTM3-201ENST00000361909 A0A1B0GW54 56 aa12.66□□□□□ -0.38
CMTM3-201ENST00000361909 PRR34Q9NV39 138 aa12.66□□□□□ -0.38
CMTM3-201ENST00000361909 DEFB4AO15263 64 aa12.66□□□□□ -0.38
CMTM3-201ENST00000361909 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
CMTM3-201ENST00000361909 DAD1P61803 113 aa12.65□□□□□ -0.38
CMTM3-201ENST00000361909 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
CMTM3-201ENST00000361909 LELP1Q5T871 98 aa12.64□□□□□ -0.39
CMTM3-201ENST00000361909 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
CMTM3-201ENST00000361909 M0R378 163 aa12.63□□□□□ -0.39
CMTM3-201ENST00000361909 LINC00528Q8N1L1 170 aa12.63□□□□□ -0.39
CMTM3-201ENST00000361909 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
CMTM3-201ENST00000361909 VPREB1P12018 145 aa12.62□□□□□ -0.39
CMTM3-201ENST00000361909 HIGD2BQ4VC39 106 aa12.62□□□□□ -0.39
CMTM3-201ENST00000361909 Q6ZTC4 211 aa12.62□□□□□ -0.39
CMTM3-201ENST00000361909 C1orf195Q5TG92 126 aa12.61□□□□□ -0.39
CMTM3-201ENST00000361909 FAM229BQ4G0N7 80 aa12.6□□□□□ -0.39
CMTM3-201ENST00000361909 LCE6AA0A183 80 aa12.59□□□□□ -0.39
CMTM3-201ENST00000361909 K7EIL1 84 aa12.59□□□□□ -0.39
CMTM3-201ENST00000361909 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
CMTM3-201ENST00000361909 RETNQ9HD89 108 aa12.59□□□□□ -0.39
CMTM3-201ENST00000361909 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
CMTM3-201ENST00000361909 Q8N9L7 120 aa12.56□□□□□ -0.4
CMTM3-201ENST00000361909 V9GYY9 64 aa12.55□□□□□ -0.4
CMTM3-201ENST00000361909 PRB2P02812 416 aaPredicted RBP12.54□□□□□ -0.4
CMTM3-201ENST00000361909 KLK12Q9UKR0 248 aa12.54□□□□□ -0.4
CMTM3-201ENST00000361909 HIGD2AQ9BW72 106 aa12.53□□□□□ -0.4
CMTM3-201ENST00000361909 IGLV5-48A0A075B6I7 105 aa12.53□□□□□ -0.4
CMTM3-201ENST00000361909 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
CMTM3-201ENST00000361909 hDV103S1A0JD37 113 aa12.52□□□□□ -0.4
CMTM3-201ENST00000361909 CAMK2N2Q96S95 79 aa12.51□□□□□ -0.41
CMTM3-201ENST00000361909 NBEAL1Q6ZS30 2694 aa12.5□□□□□ -0.41
CMTM3-201ENST00000361909 H3BNG1 76 aa12.49□□□□□ -0.41
CMTM3-201ENST00000361909 Q1T7F1 81 aa12.49□□□□□ -0.41
CMTM3-201ENST00000361909 PRR15Q8IV56 129 aa12.48□□□□□ -0.41
CMTM3-201ENST00000361909 MGAM2Q2M2H8 2515 aa12.48□□□□□ -0.41
CMTM3-201ENST00000361909 HTN3P15516 51 aa12.47□□□□□ -0.41
CMTM3-201ENST00000361909 C3orf84H3BNL1 204 aa12.47□□□□□ -0.41
CMTM3-201ENST00000361909 SMIM29Q86T20 159 aa12.46□□□□□ -0.41
CMTM3-201ENST00000361909 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.42
CMTM3-201ENST00000361909 ZCCHC13Q8WW36 166 aaKnown RBP12.45□□□□□ -0.42
CMTM3-201ENST00000361909 KCNQ1DNQ9H478 68 aa12.45□□□□□ -0.42
CMTM3-201ENST00000361909 KRTAP21-3Q3LHN1 58 aa12.43□□□□□ -0.42
CMTM3-201ENST00000361909 DHRS4-AS1Q9P1J3 65 aa12.43□□□□□ -0.42
CMTM3-201ENST00000361909 Q8N377 158 aa12.42□□□□□ -0.42
CMTM3-201ENST00000361909 Q6ZRU5 148 aa12.42□□□□□ -0.42
CMTM3-201ENST00000361909 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
CMTM3-201ENST00000361909 FAM30AQ9NZY2 134 aa12.42□□□□□ -0.42
CMTM3-201ENST00000361909 ETDCA0A1B0GVM5 59 aa12.41□□□□□ -0.42
CMTM3-201ENST00000361909 DEFB131BA0A096LNP1 70 aa12.39□□□□□ -0.43
CMTM3-201ENST00000361909 SEC61GP60059 68 aa12.39□□□□□ -0.43
CMTM3-201ENST00000361909 Q8NBF4 154 aa12.39□□□□□ -0.43
CMTM3-201ENST00000361909 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
CMTM3-201ENST00000361909 KRTAP26-1Q6PEX3 210 aa12.38□□□□□ -0.43
CMTM3-201ENST00000361909 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
CMTM3-201ENST00000361909 TNP2Q05952 138 aa12.37□□□□□ -0.43
CMTM3-201ENST00000361909 SPRR4Q96PI1 79 aa12.37□□□□□ -0.43
CMTM3-201ENST00000361909 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
CMTM3-201ENST00000361909 NDUFB1O75438 58 aa12.37□□□□□ -0.43
CMTM3-201ENST00000361909 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
CMTM3-201ENST00000361909 Q6ZRP5 223 aa12.36□□□□□ -0.43
CMTM3-201ENST00000361909 C15orf56Q8N910 161 aa12.36□□□□□ -0.43
CMTM3-201ENST00000361909 A0A1W2PNM2 257 aa12.36□□□□□ -0.43
CMTM3-201ENST00000361909 C1orf137Q5JT78 98 aa12.34□□□□□ -0.43
CMTM3-201ENST00000361909 Q6ZRX8 168 aa12.33□□□□□ -0.44
CMTM3-201ENST00000361909 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
CMTM3-201ENST00000361909 PLA2G2DQ9UNK4 145 aa12.33□□□□□ -0.44
CMTM3-201ENST00000361909 DSCR10P59022 87 aa12.31□□□□□ -0.44
CMTM3-201ENST00000361909 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
CMTM3-201ENST00000361909 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-201ENST00000361909 PMAIP1Q13794 54 aa12.29□□□□□ -0.44
CMTM3-201ENST00000361909 HCG22E2RYF7 251 aa12.28□□□□□ -0.44
CMTM3-201ENST00000361909 SYCNQ0VAF6 134 aa12.28□□□□□ -0.44
CMTM3-201ENST00000361909 TLX1NBP0CAT3 122 aa12.27□□□□□ -0.45
CMTM3-201ENST00000361909 HUWE1Q7Z6Z7 4374 aaKnown RBP12.27□□□□□ -0.45
CMTM3-201ENST00000361909 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
CMTM3-201ENST00000361909 KRTAP4-16G5E9R7 235 aaPredicted RBP12.26□□□□□ -0.45
CMTM3-201ENST00000361909 SPRR1AP35321 89 aa12.26□□□□□ -0.45
CMTM3-201ENST00000361909 WFDC10BQ8IUB3 73 aa12.26□□□□□ -0.45
CMTM3-201ENST00000361909 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
CMTM3-201ENST00000361909 K7EQZ3 153 aa12.25□□□□□ -0.45
CMTM3-201ENST00000361909 PSCAO43653 123 aa12.23□□□□□ -0.45
CMTM3-201ENST00000361909 SERTAD4-AS1Q5TG53 156 aa12.23□□□□□ -0.45
CMTM3-201ENST00000361909 Q9BRP9 147 aa12.23□□□□□ -0.45
CMTM3-201ENST00000361909 MP68P56378 58 aa12.22□□□□□ -0.45
CMTM3-201ENST00000361909 IGLV1-50A0A075B6I6 118 aa12.2□□□□□ -0.46
CMTM3-201ENST00000361909 LRCOL1A6NCL2 159 aa12.19□□□□□ -0.46
CMTM3-201ENST00000361909 H3BPC8 53 aa12.19□□□□□ -0.46
CMTM3-201ENST00000361909 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
CMTM3-201ENST00000361909 LINC01556Q5JQF7 62 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms