RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C15orf56Q8N910 161 aa12.31□□□□□ -0.44
CLIP2-202ENST00000361545 IGLV1-50A0A075B6I6 118 aa12.3□□□□□ -0.44
CLIP2-202ENST00000361545 A0A087WTM6 91 aa12.29□□□□□ -0.44
CLIP2-202ENST00000361545 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
CLIP2-202ENST00000361545 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
CLIP2-202ENST00000361545 TP53AIP1Q9HCN2 124 aa12.28□□□□□ -0.44
CLIP2-202ENST00000361545 MKI67P46013 3256 aaKnown RBP12.27□□□□□ -0.45
CLIP2-202ENST00000361545 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
CLIP2-202ENST00000361545 A0A1B0GW54 56 aa12.26□□□□□ -0.45
CLIP2-202ENST00000361545 Q96NJ1 140 aa12.26□□□□□ -0.45
CLIP2-202ENST00000361545 EIF4EBP3O60516 100 aaPredicted RBP12.24□□□□□ -0.45
CLIP2-202ENST00000361545 KCNQ1DNQ9H478 68 aa12.23□□□□□ -0.45
CLIP2-202ENST00000361545 C9orf129Q5T035 196 aaKnown RBP12.21□□□□□ -0.45
CLIP2-202ENST00000361545 APLNQ9ULZ1 77 aa12.21□□□□□ -0.46
CLIP2-202ENST00000361545 CASC10Q5T4H9 136 aa12.2□□□□□ -0.46
CLIP2-202ENST00000361545 BRCA2P51587 3418 aa12.2□□□□□ -0.46
CLIP2-202ENST00000361545 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
CLIP2-202ENST00000361545 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
CLIP2-202ENST00000361545 ATP11AUNQ6ZP68 121 aa12.18□□□□□ -0.46
CLIP2-202ENST00000361545 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CLIP2-202ENST00000361545 TEP1Q99973 2627 aaKnown RBP12.18□□□□□ -0.46
CLIP2-202ENST00000361545 ZNF861PO60384 105 aa12.16□□□□□ -0.46
CLIP2-202ENST00000361545 MGAQ8IWI9 3026 aa12.15□□□□□ -0.46
CLIP2-202ENST00000361545 TRAV22A0A0B4J277 110 aa12.15□□□□□ -0.46
CLIP2-202ENST00000361545 ANAPC11Q9NYG5 84 aa12.14□□□□□ -0.47
CLIP2-202ENST00000361545 ACYP2P14621 99 aa12.13□□□□□ -0.47
CLIP2-202ENST00000361545 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
CLIP2-202ENST00000361545 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
CLIP2-202ENST00000361545 A0A0G2JQZ4 141 aa12.11□□□□□ -0.47
CLIP2-202ENST00000361545 A0A1W2PNN7 141 aa12.11□□□□□ -0.47
CLIP2-202ENST00000361545 IGFL1Q6UW32 110 aa12.11□□□□□ -0.47
CLIP2-202ENST00000361545 K7EQZ3 153 aa12.11□□□□□ -0.47
CLIP2-202ENST00000361545 A8MWP4 228 aa12.1□□□□□ -0.47
CLIP2-202ENST00000361545 ZNF292O60281 2723 aa12.1□□□□□ -0.47
CLIP2-202ENST00000361545 A0A0C4DFX4 3053 aa12.09□□□□□ -0.47
CLIP2-202ENST00000361545 A0A1B0GU69 56 aa12.08□□□□□ -0.47
CLIP2-202ENST00000361545 LINC00336Q6ZUF6 198 aa12.07□□□□□ -0.48
CLIP2-202ENST00000361545 TLX1NBP0CAT3 122 aa12.07□□□□□ -0.48
CLIP2-202ENST00000361545 ZNF575Q86XF7 245 aa12.07□□□□□ -0.48
CLIP2-202ENST00000361545 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
CLIP2-202ENST00000361545 PRUNE2Q8WUY3 3088 aa12.06□□□□□ -0.48
CLIP2-202ENST00000361545 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
CLIP2-202ENST00000361545 DSCR10P59022 87 aa12.06□□□□□ -0.48
CLIP2-202ENST00000361545 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
CLIP2-202ENST00000361545 Q8N377 158 aa12.05□□□□□ -0.48
CLIP2-202ENST00000361545 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
CLIP2-202ENST00000361545 C9orf92A6NGG3 77 aa12.05□□□□□ -0.48
CLIP2-202ENST00000361545 TRANK1O15050 2925 aa12.04□□□□□ -0.48
CLIP2-202ENST00000361545 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
CLIP2-202ENST00000361545 SSBP3-AS1Q7Z2R9 100 aa12.04□□□□□ -0.48
CLIP2-202ENST00000361545 IGLV7-43P04211 117 aa12.04□□□□□ -0.48
CLIP2-202ENST00000361545 OBSCN-AS1Q96MR7 158 aa12.02□□□□□ -0.49
CLIP2-202ENST00000361545 H3BPC8 53 aa12.02□□□□□ -0.49
CLIP2-202ENST00000361545 COX6B2Q6YFQ2 88 aa12.02□□□□□ -0.49
CLIP2-202ENST00000361545 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.49
CLIP2-202ENST00000361545 CNBPP62633 177 aaKnown RBP12.01□□□□□ -0.49
CLIP2-202ENST00000361545 TEX15Q9BXT5 2789 aa12.01□□□□□ -0.49
CLIP2-202ENST00000361545 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
CLIP2-202ENST00000361545 AKAP13Q12802 2813 aa12□□□□□ -0.49
CLIP2-202ENST00000361545 TNP2Q05952 138 aa11.99□□□□□ -0.49
CLIP2-202ENST00000361545 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
CLIP2-202ENST00000361545 IGLV8-61A0A075B6I0 122 aa11.98□□□□□ -0.49
CLIP2-202ENST00000361545 ERC2-IT1O76042 136 aa11.98□□□□□ -0.49
CLIP2-202ENST00000361545 LOC101927531A0A1B0GV80 90 aa11.97□□□□□ -0.49
CLIP2-202ENST00000361545 C8orf17Q9NRJ1 99 aa11.95□□□□□ -0.5
CLIP2-202ENST00000361545 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
CLIP2-202ENST00000361545 CHD6Q8TD26 2715 aa11.93□□□□□ -0.5
CLIP2-202ENST00000361545 PRR15Q8IV56 129 aa11.93□□□□□ -0.5
CLIP2-202ENST00000361545 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
CLIP2-202ENST00000361545 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
CLIP2-202ENST00000361545 A0A1B0GVX0 72 aa11.91□□□□□ -0.5
CLIP2-202ENST00000361545 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
CLIP2-202ENST00000361545 A8MUN3 132 aa11.9□□□□□ -0.5
CLIP2-202ENST00000361545 CR1P17927 2039 aa11.88□□□□□ -0.51
CLIP2-202ENST00000361545 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
CLIP2-202ENST00000361545 XIRP2A4UGR9 3374 aa11.86□□□□□ -0.51
CLIP2-202ENST00000361545 WIPF1O43516 503 aa11.84□□□□□ -0.51
CLIP2-202ENST00000361545 KLKP1Q107X0 134 aa11.83□□□□□ -0.52
CLIP2-202ENST00000361545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-202ENST00000361545 TRIOO75962 3097 aa11.8□□□□□ -0.52
CLIP2-202ENST00000361545 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-202ENST00000361545 A0A1W2PNM2 257 aa11.8□□□□□ -0.52
CLIP2-202ENST00000361545 H7BZZ5 65 aa11.78□□□□□ -0.52
CLIP2-202ENST00000361545 UNC79Q9P2D8 2635 aa11.78□□□□□ -0.52
CLIP2-202ENST00000361545 BAHCC1Q9P281 2608 aa11.77□□□□□ -0.53
CLIP2-202ENST00000361545 IGLV5-37A0A075B6J1 123 aa11.77□□□□□ -0.53
CLIP2-202ENST00000361545 IGSF10Q6WRI0 2623 aa11.76□□□□□ -0.53
CLIP2-202ENST00000361545 COA5Q86WW8 74 aa11.76□□□□□ -0.53
CLIP2-202ENST00000361545 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
CLIP2-202ENST00000361545 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
CLIP2-202ENST00000361545 LINC01600Q96MT4 127 aa11.73□□□□□ -0.53
CLIP2-202ENST00000361545 CD164Q04900 197 aa11.7□□□□□ -0.54
CLIP2-202ENST00000361545 PRR26Q8N8Z3 221 aa11.7□□□□□ -0.54
CLIP2-202ENST00000361545 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
CLIP2-202ENST00000361545 CDH23Q9H251 3354 aa11.67□□□□□ -0.54
CLIP2-202ENST00000361545 RBM12B-AS1Q9P1G2 102 aa11.66□□□□□ -0.54
CLIP2-202ENST00000361545 IGLV5-48A0A075B6I7 105 aa11.65□□□□□ -0.54
CLIP2-202ENST00000361545 VPS13AQ96RL7 3174 aa11.63□□□□□ -0.55
CLIP2-202ENST00000361545 GCN1Q92616 2671 aaKnown RBP11.62□□□□□ -0.55
CLIP2-202ENST00000361545 Q8N1X5 172 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms