RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
NSMCE1-201ENST00000361439 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-201ENST00000361439 FAM19A1Q7Z5A9 133 aa8.42□□□□□ -1.06
NSMCE1-201ENST00000361439 CEND1Q8N111 149 aa8.42□□□□□ -1.06
NSMCE1-201ENST00000361439 TMEM238LA0A1B0GVL6 79 aa8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 ETDCA0A1B0GVM5 59 aa8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 A6NDN8 102 aa8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 A6NJY4 79 aa8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 HSD52Q0P140 79 aa8.41□□□□□ -1.06
NSMCE1-201ENST00000361439 C12orf57Q99622 126 aa8.4□□□□□ -1.06
NSMCE1-201ENST00000361439 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
NSMCE1-201ENST00000361439 OXTP01178 125 aa8.39□□□□□ -1.07
NSMCE1-201ENST00000361439 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
NSMCE1-201ENST00000361439 FLG2Q5D862 2391 aaPredicted RBP8.38□□□□□ -1.07
NSMCE1-201ENST00000361439 B5MCH6 92 aa8.38□□□□□ -1.07
NSMCE1-201ENST00000361439 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
NSMCE1-201ENST00000361439 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
NSMCE1-201ENST00000361439 TSTD3H0UI37 97 aa8.37□□□□□ -1.07
NSMCE1-201ENST00000361439 PRLHP81277 87 aa8.37□□□□□ -1.07
NSMCE1-201ENST00000361439 Q6ZRX8 168 aa8.37□□□□□ -1.07
NSMCE1-201ENST00000361439 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
NSMCE1-201ENST00000361439 CFC1P0CG37 223 aa8.36□□□□□ -1.07
NSMCE1-201ENST00000361439 PRO1933Q9H354 126 aa8.36□□□□□ -1.07
NSMCE1-201ENST00000361439 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-201ENST00000361439 RAB37Q96AX2 223 aa8.35□□□□□ -1.07
NSMCE1-201ENST00000361439 A0A1B0GWB2 263 aa8.34□□□□□ -1.07
NSMCE1-201ENST00000361439 FXYD2P54710 66 aa8.34□□□□□ -1.07
NSMCE1-201ENST00000361439 ELOF1P60002 83 aaKnown RBP8.34□□□□□ -1.07
NSMCE1-201ENST00000361439 C6orf99Q4VX62 202 aa8.34□□□□□ -1.07
NSMCE1-201ENST00000361439 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
NSMCE1-201ENST00000361439 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 SMIM11BQ8TCY0 68 aa8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 LINC01600Q96MT4 127 aa8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 HIGD2AQ9BW72 106 aa8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 DHRS4-AS1Q9P1J3 65 aa8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 ZNF706Q9Y5V0 76 aaPredicted RBP8.33□□□□□ -1.08
NSMCE1-201ENST00000361439 COX7BP24311 80 aa8.32□□□□□ -1.08
NSMCE1-201ENST00000361439 VAMP3Q15836 100 aa8.32□□□□□ -1.08
NSMCE1-201ENST00000361439 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
NSMCE1-201ENST00000361439 PRO1854Q9UHT4 67 aa8.31□□□□□ -1.08
NSMCE1-201ENST00000361439 M0R143 59 aa8.3□□□□□ -1.08
NSMCE1-201ENST00000361439 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
NSMCE1-201ENST00000361439 BVES-AS1Q5T3Y7 98 aa8.3□□□□□ -1.08
NSMCE1-201ENST00000361439 Q9BRP9 147 aa8.3□□□□□ -1.08
NSMCE1-201ENST00000361439 NHP2Q9NX24 153 aaKnown RBP8.29□□□□□ -1.08
NSMCE1-201ENST00000361439 CTAG1AP78358 180 aa8.28□□□□□ -1.08
NSMCE1-201ENST00000361439 FAM229BQ4G0N7 80 aa8.28□□□□□ -1.08
NSMCE1-201ENST00000361439 LRP1Q07954 4544 aaKnown RBP8.27□□□□□ -1.09
NSMCE1-201ENST00000361439 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
NSMCE1-201ENST00000361439 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
NSMCE1-201ENST00000361439 J3QL48 77 aa8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 SLC25A20O43772 301 aa8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 CRYGAP11844 174 aa8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 Q1RN00 199 aa8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 LINC00483Q53H64 154 aa8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
NSMCE1-201ENST00000361439 H0YGX0 51 aa8.24□□□□□ -1.09
NSMCE1-201ENST00000361439 H7C2G1 150 aa8.24□□□□□ -1.09
NSMCE1-201ENST00000361439 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
NSMCE1-201ENST00000361439 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
NSMCE1-201ENST00000361439 SNCGO76070 127 aa8.23□□□□□ -1.09
NSMCE1-201ENST00000361439 LINC00575Q6W349 94 aa8.23□□□□□ -1.09
NSMCE1-201ENST00000361439 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
NSMCE1-201ENST00000361439 K7ERJ3 54 aa8.21□□□□□ -1.1
NSMCE1-201ENST00000361439 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
NSMCE1-201ENST00000361439 A0A1B0GX51 115 aa8.2□□□□□ -1.1
NSMCE1-201ENST00000361439 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
NSMCE1-201ENST00000361439 COX6CP09669 75 aa8.2□□□□□ -1.1
NSMCE1-201ENST00000361439 SPRR1BP22528 89 aa8.2□□□□□ -1.1
NSMCE1-201ENST00000361439 GAGE2AQ6NT46 116 aa8.2□□□□□ -1.1
NSMCE1-201ENST00000361439 A0A087X002 238 aa8.19□□□□□ -1.1
NSMCE1-201ENST00000361439 TEX49A0A1B0GTD5 131 aa8.18□□□□□ -1.1
NSMCE1-201ENST00000361439 TRIAP1O43715 76 aa8.18□□□□□ -1.1
NSMCE1-201ENST00000361439 TSPAN13O95857 204 aa8.18□□□□□ -1.1
NSMCE1-201ENST00000361439 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
NSMCE1-201ENST00000361439 TNXBP22105 4242 aa8.18□□□□□ -1.1
NSMCE1-201ENST00000361439 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
NSMCE1-201ENST00000361439 PSMB2P49721 201 aa8.17□□□□□ -1.1
NSMCE1-201ENST00000361439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
NSMCE1-201ENST00000361439 ST20-AS1Q8NBB2 130 aa8.17□□□□□ -1.1
NSMCE1-201ENST00000361439 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
NSMCE1-201ENST00000361439 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
NSMCE1-201ENST00000361439 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
NSMCE1-201ENST00000361439 GHRHP01286 108 aa8.15□□□□□ -1.1
NSMCE1-201ENST00000361439 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
NSMCE1-201ENST00000361439 Q6ZQY7 126 aa8.14□□□□□ -1.11
NSMCE1-201ENST00000361439 LAMTOR3Q9UHA4 124 aa8.14□□□□□ -1.11
NSMCE1-201ENST00000361439 LINC01547P58512 204 aaPredicted RBP8.13□□□□□ -1.11
NSMCE1-201ENST00000361439 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
NSMCE1-201ENST00000361439 BATFQ16520 125 aa8.12□□□□□ -1.11
NSMCE1-201ENST00000361439 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
NSMCE1-201ENST00000361439 H3BQ85 93 aa8.11□□□□□ -1.11
NSMCE1-201ENST00000361439 SCGB1C2P0DMR2 95 aa8.11□□□□□ -1.11
NSMCE1-201ENST00000361439 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
NSMCE1-201ENST00000361439 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
NSMCE1-201ENST00000361439 Q8N377 158 aa8.1□□□□□ -1.11
NSMCE1-201ENST00000361439 LYRM7Q5U5X0 104 aa8.09□□□□□ -1.11
NSMCE1-201ENST00000361439 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
NSMCE1-201ENST00000361439 SMIM29Q86T20 159 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms