RNA–Protein interactions for RNA: ENST00000360954.2

HS3ST3B1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST3B1, Length 5,367 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3B1-201ENST00000360954 Q8N377 158 aa10.66□□□□□ -0.7
HS3ST3B1-201ENST00000360954 CNBPP62633 177 aaKnown RBP10.66□□□□□ -0.7
HS3ST3B1-201ENST00000360954 PRR15Q8IV56 129 aa10.66□□□□□ -0.7
HS3ST3B1-201ENST00000360954 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.7
HS3ST3B1-201ENST00000360954 KLKP1Q107X0 134 aa10.64□□□□□ -0.71
HS3ST3B1-201ENST00000360954 A0A087WTM6 91 aa10.62□□□□□ -0.71
HS3ST3B1-201ENST00000360954 F8P00451 2351 aa10.62□□□□□ -0.71
HS3ST3B1-201ENST00000360954 IGLV5-37A0A075B6J1 123 aa10.62□□□□□ -0.71
HS3ST3B1-201ENST00000360954 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
HS3ST3B1-201ENST00000360954 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
HS3ST3B1-201ENST00000360954 C8orf17Q9NRJ1 99 aa10.61□□□□□ -0.71
HS3ST3B1-201ENST00000360954 Q96NJ1 140 aa10.6□□□□□ -0.71
HS3ST3B1-201ENST00000360954 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
HS3ST3B1-201ENST00000360954 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
HS3ST3B1-201ENST00000360954 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
HS3ST3B1-201ENST00000360954 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
HS3ST3B1-201ENST00000360954 ZNF575Q86XF7 245 aa10.55□□□□□ -0.72
HS3ST3B1-201ENST00000360954 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
HS3ST3B1-201ENST00000360954 WIPF1O43516 503 aa10.54□□□□□ -0.72
HS3ST3B1-201ENST00000360954 OBSCN-AS1Q96MR7 158 aa10.53□□□□□ -0.72
HS3ST3B1-201ENST00000360954 COA5Q86WW8 74 aa10.52□□□□□ -0.72
HS3ST3B1-201ENST00000360954 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.73
HS3ST3B1-201ENST00000360954 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
HS3ST3B1-201ENST00000360954 LINC00336Q6ZUF6 198 aa10.52□□□□□ -0.73
HS3ST3B1-201ENST00000360954 UTRNP46939 3433 aa10.51□□□□□ -0.73
HS3ST3B1-201ENST00000360954 IGLV7-43P04211 117 aa10.51□□□□□ -0.73
HS3ST3B1-201ENST00000360954 SPRR4Q96PI1 79 aa10.5□□□□□ -0.73
HS3ST3B1-201ENST00000360954 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
HS3ST3B1-201ENST00000360954 A0A1W2PNM2 257 aa10.46□□□□□ -0.74
HS3ST3B1-201ENST00000360954 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
HS3ST3B1-201ENST00000360954 DSCR10P59022 87 aa10.44□□□□□ -0.74
HS3ST3B1-201ENST00000360954 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
HS3ST3B1-201ENST00000360954 H7BZZ5 65 aa10.43□□□□□ -0.74
HS3ST3B1-201ENST00000360954 UQCR11O14957 56 aa10.42□□□□□ -0.74
HS3ST3B1-201ENST00000360954 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
HS3ST3B1-201ENST00000360954 CD164Q04900 197 aa10.4□□□□□ -0.74
HS3ST3B1-201ENST00000360954 FAM104AQ969W3 186 aa10.39□□□□□ -0.75
HS3ST3B1-201ENST00000360954 A8MUN3 132 aa10.37□□□□□ -0.75
HS3ST3B1-201ENST00000360954 J3QL48 77 aa10.33□□□□□ -0.76
HS3ST3B1-201ENST00000360954 HECTD1Q9ULT8 2610 aa10.32□□□□□ -0.76
HS3ST3B1-201ENST00000360954 PRRC2CQ9Y520 2896 aaKnown RBP10.3□□□□□ -0.76
HS3ST3B1-201ENST00000360954 A0A0G2JQZ4 141 aa10.29□□□□□ -0.76
HS3ST3B1-201ENST00000360954 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
HS3ST3B1-201ENST00000360954 FLNBO75369 2602 aaKnown RBP10.27□□□□□ -0.76
HS3ST3B1-201ENST00000360954 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.76
HS3ST3B1-201ENST00000360954 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
HS3ST3B1-201ENST00000360954 OCR1Q9BZK8 76 aa10.26□□□□□ -0.77
HS3ST3B1-201ENST00000360954 MIR22HGQ0VDD5 57 aa10.26□□□□□ -0.77
HS3ST3B1-201ENST00000360954 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
HS3ST3B1-201ENST00000360954 FLNAP21333 2647 aaKnown RBP10.25□□□□□ -0.77
HS3ST3B1-201ENST00000360954 FAM229BQ4G0N7 80 aa10.25□□□□□ -0.77
HS3ST3B1-201ENST00000360954 SPRR1AP35321 89 aa10.24□□□□□ -0.77
HS3ST3B1-201ENST00000360954 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
HS3ST3B1-201ENST00000360954 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
HS3ST3B1-201ENST00000360954 SMR3BP02814 79 aaPredicted RBP10.19□□□□□ -0.78
HS3ST3B1-201ENST00000360954 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
HS3ST3B1-201ENST00000360954 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
HS3ST3B1-201ENST00000360954 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
HS3ST3B1-201ENST00000360954 TNP2Q05952 138 aa10.16□□□□□ -0.78
HS3ST3B1-201ENST00000360954 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
HS3ST3B1-201ENST00000360954 CR1P17927 2039 aa10.16□□□□□ -0.78
HS3ST3B1-201ENST00000360954 SPRR1BP22528 89 aa10.16□□□□□ -0.78
HS3ST3B1-201ENST00000360954 USP24Q9UPU5 2620 aa10.16□□□□□ -0.78
HS3ST3B1-201ENST00000360954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.14□□□□□ -0.79
HS3ST3B1-201ENST00000360954 CHD7Q9P2D1 2997 aa10.13□□□□□ -0.79
HS3ST3B1-201ENST00000360954 IGLV7-46A0A075B6I9 117 aa10.11□□□□□ -0.79
HS3ST3B1-201ENST00000360954 HELZ2Q9BYK8 2649 aaKnown RBP10.11□□□□□ -0.79
HS3ST3B1-201ENST00000360954 Q1T7F1 81 aa10.11□□□□□ -0.79
HS3ST3B1-201ENST00000360954 PCNTO95613 3336 aa10.1□□□□□ -0.79
HS3ST3B1-201ENST00000360954 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
HS3ST3B1-201ENST00000360954 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
HS3ST3B1-201ENST00000360954 CHD9Q3L8U1 2897 aa10.08□□□□□ -0.8
HS3ST3B1-201ENST00000360954 ATRQ13535 2644 aa10.06□□□□□ -0.8
HS3ST3B1-201ENST00000360954 SPINT4Q6UDR6 99 aa10.06□□□□□ -0.8
HS3ST3B1-201ENST00000360954 Q8NDZ9 215 aa10.05□□□□□ -0.8
HS3ST3B1-201ENST00000360954 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
HS3ST3B1-201ENST00000360954 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
HS3ST3B1-201ENST00000360954 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
HS3ST3B1-201ENST00000360954 Q8N1X5 172 aa10.01□□□□□ -0.81
HS3ST3B1-201ENST00000360954 MAST4O15021 2626 aa9.98□□□□□ -0.81
HS3ST3B1-201ENST00000360954 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
HS3ST3B1-201ENST00000360954 LCA10Q71F78 164 aa9.98□□□□□ -0.81
HS3ST3B1-201ENST00000360954 BPTFQ12830 3046 aa9.97□□□□□ -0.81
HS3ST3B1-201ENST00000360954 HRES1P13985 223 aa9.97□□□□□ -0.81
HS3ST3B1-201ENST00000360954 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.81
HS3ST3B1-201ENST00000360954 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
HS3ST3B1-201ENST00000360954 ZCCHC13Q8WW36 166 aaKnown RBP9.94□□□□□ -0.82
HS3ST3B1-201ENST00000360954 Q75L30 129 aa9.94□□□□□ -0.82
HS3ST3B1-201ENST00000360954 TRANK1O15050 2925 aa9.93□□□□□ -0.82
HS3ST3B1-201ENST00000360954 Q6ZSA8 131 aa9.93□□□□□ -0.82
HS3ST3B1-201ENST00000360954 LINC01558Q9Y6Z2 57 aa9.91□□□□□ -0.82
HS3ST3B1-201ENST00000360954 ZNF292O60281 2723 aa9.9□□□□□ -0.82
HS3ST3B1-201ENST00000360954 KRTAP1-5Q9BYS1 174 aa9.89□□□□□ -0.83
HS3ST3B1-201ENST00000360954 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
HS3ST3B1-201ENST00000360954 RANBP2P49792 3224 aaKnown RBP9.86□□□□□ -0.83
HS3ST3B1-201ENST00000360954 A0A1B0GU33 70 aa9.85□□□□□ -0.83
HS3ST3B1-201ENST00000360954 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
HS3ST3B1-201ENST00000360954 Q5W150 140 aa9.82□□□□□ -0.84
HS3ST3B1-201ENST00000360954 HTTP42858 3142 aa9.82□□□□□ -0.84
HS3ST3B1-201ENST00000360954 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms