RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ESRGQ1W209 222 aa4.8□□□□□ -1.64
CLCN3-202ENST00000360642 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
CLCN3-202ENST00000360642 Q8NBF4 154 aa4.8□□□□□ -1.64
CLCN3-202ENST00000360642 C15orf56Q8N910 161 aa4.8□□□□□ -1.64
CLCN3-202ENST00000360642 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
CLCN3-202ENST00000360642 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
CLCN3-202ENST00000360642 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
CLCN3-202ENST00000360642 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
CLCN3-202ENST00000360642 KRTAP24-1Q3LI83 254 aa4.79□□□□□ -1.64
CLCN3-202ENST00000360642 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 PRB2P02812 416 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-202ENST00000360642 LINC01556Q5JQF7 62 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 Q6ZRU5 148 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 CAMK2N2Q96S95 79 aa4.78□□□□□ -1.64
CLCN3-202ENST00000360642 LOC110117498A0A087WWA1 95 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 Q6ZQT0 140 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 C3orf22Q8N5N4 141 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
CLCN3-202ENST00000360642 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 NDUFC2-KCTD14E9PQ53 114 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 H3BQ85 93 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 ZNF73O43830 326 aaPredicted RBP4.76□□□□□ -1.65
CLCN3-202ENST00000360642 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
CLCN3-202ENST00000360642 RBM3P98179 157 aaKnown RBP4.76□□□□□ -1.65
CLCN3-202ENST00000360642 UQCRQO14949 82 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 Q6ZQY7 126 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 ATOX1O00244 68 aa4.76□□□□□ -1.65
CLCN3-202ENST00000360642 M0R378 163 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 DNAH1Q9P2D7 4330 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 COX7CP15954 63 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 COX7BP24311 80 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-202ENST00000360642 COL6A5A8TX70 2615 aa4.75□□□□□ -1.65
CLCN3-202ENST00000360642 A0A087WVE0 104 aa4.74□□□□□ -1.65
CLCN3-202ENST00000360642 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
CLCN3-202ENST00000360642 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
CLCN3-202ENST00000360642 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
CLCN3-202ENST00000360642 CSMD3Q7Z407 3707 aa4.74□□□□□ -1.65
CLCN3-202ENST00000360642 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
CLCN3-202ENST00000360642 M0R2N4 97 aa4.73□□□□□ -1.65
CLCN3-202ENST00000360642 PDE6GP18545 87 aa4.73□□□□□ -1.65
CLCN3-202ENST00000360642 DSCR8Q96T75 97 aa4.73□□□□□ -1.65
CLCN3-202ENST00000360642 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
CLCN3-202ENST00000360642 NBEAL1Q6ZS30 2694 aa4.73□□□□□ -1.65
CLCN3-202ENST00000360642 SYCNQ0VAF6 134 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 LYSTQ99698 3801 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 CRYGAP11844 174 aa4.72□□□□□ -1.65
CLCN3-202ENST00000360642 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.66
CLCN3-202ENST00000360642 FAM19A1Q7Z5A9 133 aa4.71□□□□□ -1.66
CLCN3-202ENST00000360642 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
CLCN3-202ENST00000360642 KCNQ1DNQ9H478 68 aa4.71□□□□□ -1.66
CLCN3-202ENST00000360642 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
CLCN3-202ENST00000360642 LINC00588Q9Y4M8 146 aa4.7□□□□□ -1.66
CLCN3-202ENST00000360642 TRAV10A0A0B4J240 114 aa4.7□□□□□ -1.66
CLCN3-202ENST00000360642 TM2D3Q9BRN9 247 aa4.7□□□□□ -1.66
CLCN3-202ENST00000360642 UPK3BQ9BT76 320 aa4.7□□□□□ -1.66
CLCN3-202ENST00000360642 DNAH10Q8IVF4 4471 aa4.69□□□□□ -1.66
CLCN3-202ENST00000360642 MRAPQ8TCY5 172 aa4.69□□□□□ -1.66
CLCN3-202ENST00000360642 MGAM2Q2M2H8 2515 aa4.69□□□□□ -1.66
CLCN3-202ENST00000360642 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
CLCN3-202ENST00000360642 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
CLCN3-202ENST00000360642 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
CLCN3-202ENST00000360642 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
CLCN3-202ENST00000360642 CXCL6P80162 114 aa4.68□□□□□ -1.66
CLCN3-202ENST00000360642 KRTAP4-16G5E9R7 235 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-202ENST00000360642 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
CLCN3-202ENST00000360642 NKAPP1Q8N9T2 125 aa4.67□□□□□ -1.66
CLCN3-202ENST00000360642 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
CLCN3-202ENST00000360642 K7EIL1 84 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 SPRR1AP35321 89 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 BCE1O60756 84 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 HAMPP81172 84 aa4.66□□□□□ -1.66
CLCN3-202ENST00000360642 FAM168BA1KXE4 195 aa4.65□□□□□ -1.66
CLCN3-202ENST00000360642 Q8N377 158 aa4.65□□□□□ -1.66
CLCN3-202ENST00000360642 Q6ZRX8 168 aa4.65□□□□□ -1.67
CLCN3-202ENST00000360642 RMI2Q96E14 147 aa4.65□□□□□ -1.67
CLCN3-202ENST00000360642 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
CLCN3-202ENST00000360642 Q9BRP9 147 aa4.64□□□□□ -1.67
CLCN3-202ENST00000360642 TENM2Q9NT68 2774 aa4.64□□□□□ -1.67
CLCN3-202ENST00000360642 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
CLCN3-202ENST00000360642 OXTP01178 125 aa4.64□□□□□ -1.67
CLCN3-202ENST00000360642 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
CLCN3-202ENST00000360642 DNAH9Q9NYC9 4486 aa4.63□□□□□ -1.67
CLCN3-202ENST00000360642 STAB2Q8WWQ8 2551 aa4.63□□□□□ -1.67
CLCN3-202ENST00000360642 C14orf177Q52M58 125 aa4.63□□□□□ -1.67
CLCN3-202ENST00000360642 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
CLCN3-202ENST00000360642 TMEM258P61165 79 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms