RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
HLA-DRB1-201ENST00000360004 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
HLA-DRB1-201ENST00000360004 LINC01600Q96MT4 127 aa11.58□□□□□ -0.56
HLA-DRB1-201ENST00000360004 MYCBP2O75592 4640 aa11.58□□□□□ -0.56
HLA-DRB1-201ENST00000360004 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
HLA-DRB1-201ENST00000360004 SPRR1AP35321 89 aa11.57□□□□□ -0.56
HLA-DRB1-201ENST00000360004 KRTAP13-1Q8IUC0 172 aa11.57□□□□□ -0.56
HLA-DRB1-201ENST00000360004 TRAV13-2A0A0B4J235 113 aa11.56□□□□□ -0.56
HLA-DRB1-201ENST00000360004 HIGD1BQ9P298 99 aa11.55□□□□□ -0.56
HLA-DRB1-201ENST00000360004 DMBT1Q9UGM3 2413 aaPredicted RBP11.54□□□□□ -0.56
HLA-DRB1-201ENST00000360004 A4D1N5 150 aa11.54□□□□□ -0.56
HLA-DRB1-201ENST00000360004 B5MCH6 92 aa11.53□□□□□ -0.56
HLA-DRB1-201ENST00000360004 ZNF706Q9Y5V0 76 aaPredicted RBP11.52□□□□□ -0.57
HLA-DRB1-201ENST00000360004 KRTAP4-16G5E9R7 235 aaPredicted RBP11.51□□□□□ -0.57
HLA-DRB1-201ENST00000360004 Q6ZRX8 168 aa11.51□□□□□ -0.57
HLA-DRB1-201ENST00000360004 C12orf57Q99622 126 aa11.51□□□□□ -0.57
HLA-DRB1-201ENST00000360004 PRR26Q8N8Z3 221 aa11.5□□□□□ -0.57
HLA-DRB1-201ENST00000360004 SMCR5Q8TEV8 140 aa11.5□□□□□ -0.57
HLA-DRB1-201ENST00000360004 RPL13AP40429 203 aaKnown RBP11.49□□□□□ -0.57
HLA-DRB1-201ENST00000360004 C6orf99Q4VX62 202 aa11.49□□□□□ -0.57
HLA-DRB1-201ENST00000360004 C2orf91Q6ZV80 131 aa11.49□□□□□ -0.57
HLA-DRB1-201ENST00000360004 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
HLA-DRB1-201ENST00000360004 COX7BP24311 80 aa11.48□□□□□ -0.57
HLA-DRB1-201ENST00000360004 TAL2Q16559 108 aa11.48□□□□□ -0.57
HLA-DRB1-201ENST00000360004 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
HLA-DRB1-201ENST00000360004 CRYGAP11844 174 aa11.47□□□□□ -0.57
HLA-DRB1-201ENST00000360004 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
HLA-DRB1-201ENST00000360004 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.57
HLA-DRB1-201ENST00000360004 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
HLA-DRB1-201ENST00000360004 A6NJY4 79 aa11.46□□□□□ -0.57
HLA-DRB1-201ENST00000360004 SMIM6P0DI80 62 aa11.46□□□□□ -0.57
HLA-DRB1-201ENST00000360004 MT1HL1P0DM35 61 aa11.46□□□□□ -0.57
HLA-DRB1-201ENST00000360004 FAT3Q8TDW7 4589 aa11.45□□□□□ -0.58
HLA-DRB1-201ENST00000360004 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
HLA-DRB1-201ENST00000360004 CEND1Q8N111 149 aa11.44□□□□□ -0.58
HLA-DRB1-201ENST00000360004 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
HLA-DRB1-201ENST00000360004 DHRS4-AS1Q9P1J3 65 aa11.44□□□□□ -0.58
HLA-DRB1-201ENST00000360004 KRTAP10-8P60410 259 aa11.43□□□□□ -0.58
HLA-DRB1-201ENST00000360004 VAMP3Q15836 100 aa11.43□□□□□ -0.58
HLA-DRB1-201ENST00000360004 SMIM11BQ8TCY0 68 aa11.43□□□□□ -0.58
HLA-DRB1-201ENST00000360004 Q9BRP9 147 aa11.43□□□□□ -0.58
HLA-DRB1-201ENST00000360004 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
HLA-DRB1-201ENST00000360004 ELOF1P60002 83 aaKnown RBP11.42□□□□□ -0.58
HLA-DRB1-201ENST00000360004 HSD52Q0P140 79 aa11.42□□□□□ -0.58
HLA-DRB1-201ENST00000360004 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
HLA-DRB1-201ENST00000360004 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
HLA-DRB1-201ENST00000360004 H7C2G1 150 aa11.41□□□□□ -0.58
HLA-DRB1-201ENST00000360004 GAGE2AQ6NT46 116 aa11.41□□□□□ -0.58
HLA-DRB1-201ENST00000360004 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
HLA-DRB1-201ENST00000360004 PRO1933Q9H354 126 aa11.41□□□□□ -0.58
HLA-DRB1-201ENST00000360004 ERC2-IT1O76042 136 aa11.4□□□□□ -0.58
HLA-DRB1-201ENST00000360004 Q1RN00 199 aa11.39□□□□□ -0.59
HLA-DRB1-201ENST00000360004 A0A087X002 238 aa11.38□□□□□ -0.59
HLA-DRB1-201ENST00000360004 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
HLA-DRB1-201ENST00000360004 CFC1P0CG37 223 aa11.38□□□□□ -0.59
HLA-DRB1-201ENST00000360004 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
HLA-DRB1-201ENST00000360004 LOC105371267A0A1B0GV96 52 aa11.37□□□□□ -0.59
HLA-DRB1-201ENST00000360004 SLC25A20O43772 301 aa11.37□□□□□ -0.59
HLA-DRB1-201ENST00000360004 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
HLA-DRB1-201ENST00000360004 FXYD2P54710 66 aa11.35□□□□□ -0.59
HLA-DRB1-201ENST00000360004 BVES-AS1Q5T3Y7 98 aa11.33□□□□□ -0.6
HLA-DRB1-201ENST00000360004 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
HLA-DRB1-201ENST00000360004 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
HLA-DRB1-201ENST00000360004 TSTD3H0UI37 97 aa11.31□□□□□ -0.6
HLA-DRB1-201ENST00000360004 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
HLA-DRB1-201ENST00000360004 DEFB105AQ8NG35 78 aa11.31□□□□□ -0.6
HLA-DRB1-201ENST00000360004 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
HLA-DRB1-201ENST00000360004 LINC00483Q53H64 154 aa11.3□□□□□ -0.6
HLA-DRB1-201ENST00000360004 C3orf22Q8N5N4 141 aa11.3□□□□□ -0.6
HLA-DRB1-201ENST00000360004 SNCGO76070 127 aa11.28□□□□□ -0.6
HLA-DRB1-201ENST00000360004 C9orf153Q5TBE3 101 aa11.28□□□□□ -0.6
HLA-DRB1-201ENST00000360004 LINC00304Q8N9R0 145 aa11.27□□□□□ -0.61
HLA-DRB1-201ENST00000360004 hADV29S1A0JD25 119 aa11.26□□□□□ -0.61
HLA-DRB1-201ENST00000360004 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
HLA-DRB1-201ENST00000360004 HERC1Q15751 4861 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 K7ERJ3 54 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 M0R143 59 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 TSPAN13O95857 204 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 PSMB2P49721 201 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 MOBPQ13875 183 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 LAMTOR3Q9UHA4 124 aa11.25□□□□□ -0.61
HLA-DRB1-201ENST00000360004 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
HLA-DRB1-201ENST00000360004 CTAG1AP78358 180 aa11.24□□□□□ -0.61
HLA-DRB1-201ENST00000360004 H0YGX0 51 aa11.23□□□□□ -0.61
HLA-DRB1-201ENST00000360004 TNXBP22105 4242 aa11.23□□□□□ -0.61
HLA-DRB1-201ENST00000360004 Q8NBF4 154 aa11.21□□□□□ -0.61
HLA-DRB1-201ENST00000360004 SPRR1BP22528 89 aa11.2□□□□□ -0.62
HLA-DRB1-201ENST00000360004 Q6ZQY7 126 aa11.2□□□□□ -0.62
HLA-DRB1-201ENST00000360004 COX6CP09669 75 aa11.19□□□□□ -0.62
HLA-DRB1-201ENST00000360004 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
HLA-DRB1-201ENST00000360004 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
HLA-DRB1-201ENST00000360004 TRIAP1O43715 76 aa11.17□□□□□ -0.62
HLA-DRB1-201ENST00000360004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.17□□□□□ -0.62
HLA-DRB1-201ENST00000360004 IGLV5-48A0A075B6I7 105 aa11.16□□□□□ -0.62
HLA-DRB1-201ENST00000360004 F8WEM9 126 aa11.16□□□□□ -0.62
HLA-DRB1-201ENST00000360004 BATFQ16520 125 aa11.14□□□□□ -0.63
HLA-DRB1-201ENST00000360004 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
HLA-DRB1-201ENST00000360004 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
HLA-DRB1-201ENST00000360004 Q8N377 158 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms