RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 UBE2BP63146 152 aa7.7□□□□□ -1.18
NIF3L1-201ENST00000359683 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
NIF3L1-201ENST00000359683 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
NIF3L1-201ENST00000359683 LINC00337Q8N6G1 96 aa7.69□□□□□ -1.18
NIF3L1-201ENST00000359683 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
NIF3L1-201ENST00000359683 DDTP30046 118 aa7.68□□□□□ -1.18
NIF3L1-201ENST00000359683 FXYD2P54710 66 aa7.68□□□□□ -1.18
NIF3L1-201ENST00000359683 CTAG1AP78358 180 aa7.68□□□□□ -1.18
NIF3L1-201ENST00000359683 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
NIF3L1-201ENST00000359683 S100A7L2Q5SY68 101 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 TMEM126AQ9H061 195 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 KCNQ1DNQ9H478 68 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 FAT1Q14517 4588 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 TRAV13-2A0A0B4J235 113 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 CFC1P0CG37 223 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 OR13C6PQ8NH95 151 aa7.67□□□□□ -1.18
NIF3L1-201ENST00000359683 A6NDN8 102 aa7.65□□□□□ -1.18
NIF3L1-201ENST00000359683 BVES-AS1Q5T3Y7 98 aa7.65□□□□□ -1.18
NIF3L1-201ENST00000359683 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
NIF3L1-201ENST00000359683 H3BS24 57 aa7.64□□□□□ -1.19
NIF3L1-201ENST00000359683 PRYO14603 147 aa7.64□□□□□ -1.19
NIF3L1-201ENST00000359683 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
NIF3L1-201ENST00000359683 Q5VSD8 79 aa7.64□□□□□ -1.19
NIF3L1-201ENST00000359683 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 SPRR1AP35321 89 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 CBY1Q9Y3M2 126 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 TRAV23DV6A0A075B6W5 121 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 A0A1B0GWB2 263 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 HINT1P49773 126 aaPredicted RBP7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
NIF3L1-201ENST00000359683 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
NIF3L1-201ENST00000359683 M0R143 59 aa7.62□□□□□ -1.19
NIF3L1-201ENST00000359683 BCE1O60756 84 aa7.62□□□□□ -1.19
NIF3L1-201ENST00000359683 RAB37Q96AX2 223 aa7.62□□□□□ -1.19
NIF3L1-201ENST00000359683 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
NIF3L1-201ENST00000359683 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-201ENST00000359683 NHP2Q9NX24 153 aaKnown RBP7.61□□□□□ -1.19
NIF3L1-201ENST00000359683 PRO1854Q9UHT4 67 aa7.61□□□□□ -1.19
NIF3L1-201ENST00000359683 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
NIF3L1-201ENST00000359683 RPL13AP40429 203 aaKnown RBP7.6□□□□□ -1.19
NIF3L1-201ENST00000359683 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
NIF3L1-201ENST00000359683 IGLV7-43P04211 117 aa7.6□□□□□ -1.19
NIF3L1-201ENST00000359683 SMIM11BQ8TCY0 68 aa7.6□□□□□ -1.19
NIF3L1-201ENST00000359683 FLG2Q5D862 2391 aaPredicted RBP7.58□□□□□ -1.2
NIF3L1-201ENST00000359683 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
NIF3L1-201ENST00000359683 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
NIF3L1-201ENST00000359683 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
NIF3L1-201ENST00000359683 HERC1Q15751 4861 aa7.58□□□□□ -1.2
NIF3L1-201ENST00000359683 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 B5MCH6 92 aa7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 H0Y9J4 135 aa7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 K7ERJ3 54 aa7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 RPL28P46779 137 aaKnown RBP7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 FAM19A1Q7Z5A9 133 aa7.57□□□□□ -1.2
NIF3L1-201ENST00000359683 TRBV7-6A0A0J9YX20 115 aa7.56□□□□□ -1.2
NIF3L1-201ENST00000359683 ZNF861PO60384 105 aa7.56□□□□□ -1.2
NIF3L1-201ENST00000359683 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
NIF3L1-201ENST00000359683 H7C2G1 150 aa7.56□□□□□ -1.2
NIF3L1-201ENST00000359683 UBE2AP49459 152 aa7.56□□□□□ -1.2
NIF3L1-201ENST00000359683 PRLHP81277 87 aa7.55□□□□□ -1.2
NIF3L1-201ENST00000359683 Q6ZRX8 168 aa7.55□□□□□ -1.2
NIF3L1-201ENST00000359683 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
NIF3L1-201ENST00000359683 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
NIF3L1-201ENST00000359683 COX7BP24311 80 aa7.53□□□□□ -1.2
NIF3L1-201ENST00000359683 BATFQ16520 125 aa7.53□□□□□ -1.2
NIF3L1-201ENST00000359683 SPINK6Q6UWN8 80 aa7.53□□□□□ -1.2
NIF3L1-201ENST00000359683 TSPAN13O95857 204 aa7.52□□□□□ -1.2
NIF3L1-201ENST00000359683 VAMP3Q15836 100 aa7.52□□□□□ -1.2
NIF3L1-201ENST00000359683 Q1RN00 199 aa7.52□□□□□ -1.2
NIF3L1-201ENST00000359683 SNHG12Q9BXW3 62 aa7.52□□□□□ -1.2
NIF3L1-201ENST00000359683 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
NIF3L1-201ENST00000359683 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
NIF3L1-201ENST00000359683 Q9BRP9 147 aa7.52□□□□□ -1.21
NIF3L1-201ENST00000359683 LCE1DQ5T752 114 aa7.51□□□□□ -1.21
NIF3L1-201ENST00000359683 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
NIF3L1-201ENST00000359683 TRIAP1O43715 76 aa7.49□□□□□ -1.21
NIF3L1-201ENST00000359683 DHRS4-AS1Q9P1J3 65 aa7.49□□□□□ -1.21
NIF3L1-201ENST00000359683 H0YGX0 51 aa7.49□□□□□ -1.21
NIF3L1-201ENST00000359683 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
NIF3L1-201ENST00000359683 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
NIF3L1-201ENST00000359683 PSMB2P49721 201 aa7.48□□□□□ -1.21
NIF3L1-201ENST00000359683 LINC00575Q6W349 94 aa7.48□□□□□ -1.21
NIF3L1-201ENST00000359683 TAX1BP3O14907 124 aa7.46□□□□□ -1.21
NIF3L1-201ENST00000359683 COX6CP09669 75 aa7.46□□□□□ -1.21
NIF3L1-201ENST00000359683 SLC25A20O43772 301 aa7.45□□□□□ -1.22
NIF3L1-201ENST00000359683 COL5A1-AS1Q5SY13 56 aa7.45□□□□□ -1.22
NIF3L1-201ENST00000359683 hADV29S1A0JD25 119 aa7.44□□□□□ -1.22
NIF3L1-201ENST00000359683 C9orf118A6NHY6 69 aa7.44□□□□□ -1.22
NIF3L1-201ENST00000359683 FAM218AQ96MZ4 157 aa7.44□□□□□ -1.22
NIF3L1-201ENST00000359683 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-201ENST00000359683 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
NIF3L1-201ENST00000359683 SCGB1C2P0DMR2 95 aa7.43□□□□□ -1.22
NIF3L1-201ENST00000359683 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
NIF3L1-201ENST00000359683 A0A1B0GX51 115 aa7.42□□□□□ -1.22
NIF3L1-201ENST00000359683 ST20-AS1Q8NBB2 130 aa7.42□□□□□ -1.22
NIF3L1-201ENST00000359683 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms