RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DSPP15924 2871 aaKnown RBP9.21□□□□□ -0.94
VCP-201ENST00000358901 PRO0628Q9UI54 55 aa9.2□□□□□ -0.94
VCP-201ENST00000358901 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
VCP-201ENST00000358901 PHF5AQ7RTV0 110 aaKnown RBP9.19□□□□□ -0.94
VCP-201ENST00000358901 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
VCP-201ENST00000358901 FRYQ5TBA9 3013 aa9.19□□□□□ -0.94
VCP-201ENST00000358901 KRTAP24-1Q3LI83 254 aa9.19□□□□□ -0.94
VCP-201ENST00000358901 TEP1Q99973 2627 aaKnown RBP9.19□□□□□ -0.94
VCP-201ENST00000358901 SPINK1P00995 79 aa9.19□□□□□ -0.94
VCP-201ENST00000358901 MDFIQ99750 246 aa9.18□□□□□ -0.94
VCP-201ENST00000358901 MOBPQ13875 183 aa9.18□□□□□ -0.94
VCP-201ENST00000358901 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
VCP-201ENST00000358901 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
VCP-201ENST00000358901 MUC3AQ02505 3323 aa9.16□□□□□ -0.94
VCP-201ENST00000358901 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
VCP-201ENST00000358901 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
VCP-201ENST00000358901 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
VCP-201ENST00000358901 SPTBN5Q9NRC6 3674 aaKnown RBP9.15□□□□□ -0.94
VCP-201ENST00000358901 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.94
VCP-201ENST00000358901 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
VCP-201ENST00000358901 C9orf129Q5T035 196 aaKnown RBP9.15□□□□□ -0.95
VCP-201ENST00000358901 PRR34Q9NV39 138 aa9.15□□□□□ -0.95
VCP-201ENST00000358901 FRYLO94915 3013 aa9.14□□□□□ -0.95
VCP-201ENST00000358901 TRBV7-4A0A0J9YYF1 115 aa9.14□□□□□ -0.95
VCP-201ENST00000358901 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
VCP-201ENST00000358901 GCN1Q92616 2671 aaKnown RBP9.14□□□□□ -0.95
VCP-201ENST00000358901 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
VCP-201ENST00000358901 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
VCP-201ENST00000358901 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
VCP-201ENST00000358901 NBEAQ8NFP9 2946 aa9.12□□□□□ -0.95
VCP-201ENST00000358901 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
VCP-201ENST00000358901 IGKV2D-30A0A075B6S6 120 aa9.12□□□□□ -0.95
VCP-201ENST00000358901 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
VCP-201ENST00000358901 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
VCP-201ENST00000358901 KCNQ1DNQ9H478 68 aa9.11□□□□□ -0.95
VCP-201ENST00000358901 TRAV22A0A0B4J277 110 aa9.11□□□□□ -0.95
VCP-201ENST00000358901 K7EQZ3 153 aa9.11□□□□□ -0.95
VCP-201ENST00000358901 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
VCP-201ENST00000358901 LINC00612Q8N6U2 182 aa9.09□□□□□ -0.95
VCP-201ENST00000358901 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
VCP-201ENST00000358901 C15orf56Q8N910 161 aa9.08□□□□□ -0.96
VCP-201ENST00000358901 IGLV1-50A0A075B6I6 118 aa9.08□□□□□ -0.96
VCP-201ENST00000358901 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
VCP-201ENST00000358901 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
VCP-201ENST00000358901 NBEAL1Q6ZS30 2694 aa9.06□□□□□ -0.96
VCP-201ENST00000358901 Q8N377 158 aa9.06□□□□□ -0.96
VCP-201ENST00000358901 H3BPC8 53 aa9.05□□□□□ -0.96
VCP-201ENST00000358901 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
VCP-201ENST00000358901 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
VCP-201ENST00000358901 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
VCP-201ENST00000358901 NBEAL2Q6ZNJ1 2754 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 BOD1L1Q8NFC6 3051 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 A0A0G2JQZ4 141 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 COL6A5A8TX70 2615 aa9.03□□□□□ -0.96
VCP-201ENST00000358901 UBR5O95071 2799 aaPredicted RBP9.02□□□□□ -0.97
VCP-201ENST00000358901 RTL8CO15255 209 aa9.01□□□□□ -0.97
VCP-201ENST00000358901 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
VCP-201ENST00000358901 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
VCP-201ENST00000358901 A8MWP4 228 aa9.01□□□□□ -0.97
VCP-201ENST00000358901 A0A1B0GU69 56 aa9□□□□□ -0.97
VCP-201ENST00000358901 ACYP2P14621 99 aa9□□□□□ -0.97
VCP-201ENST00000358901 KRTAP10-11P60412 298 aa9□□□□□ -0.97
VCP-201ENST00000358901 H7BZZ5 65 aa9□□□□□ -0.97
VCP-201ENST00000358901 A8MUN3 132 aa8.97□□□□□ -0.97
VCP-201ENST00000358901 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
VCP-201ENST00000358901 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
VCP-201ENST00000358901 MYO15AQ9UKN7 3530 aa8.97□□□□□ -0.97
VCP-201ENST00000358901 CR1P17927 2039 aa8.96□□□□□ -0.97
VCP-201ENST00000358901 KALRNO60229 2985 aa8.95□□□□□ -0.98
VCP-201ENST00000358901 LINC01600Q96MT4 127 aa8.95□□□□□ -0.98
VCP-201ENST00000358901 LINC00313P59037 77 aa8.94□□□□□ -0.98
VCP-201ENST00000358901 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
VCP-201ENST00000358901 K7EIL1 84 aa8.94□□□□□ -0.98
VCP-201ENST00000358901 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
VCP-201ENST00000358901 CASC10Q5T4H9 136 aa8.93□□□□□ -0.98
VCP-201ENST00000358901 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
VCP-201ENST00000358901 DMXL2Q8TDJ6 3036 aa8.92□□□□□ -0.98
VCP-201ENST00000358901 KRTAP1-1Q07627 177 aa8.91□□□□□ -0.98
VCP-201ENST00000358901 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
VCP-201ENST00000358901 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
VCP-201ENST00000358901 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
VCP-201ENST00000358901 TACC2O95359 2948 aa8.9□□□□□ -0.98
VCP-201ENST00000358901 COA5Q86WW8 74 aa8.9□□□□□ -0.98
VCP-201ENST00000358901 LOC101927531A0A1B0GV80 90 aa8.89□□□□□ -0.99
VCP-201ENST00000358901 ADGRG4Q8IZF6 3080 aa8.89□□□□□ -0.99
VCP-201ENST00000358901 IGLV8-61A0A075B6I0 122 aa8.89□□□□□ -0.99
VCP-201ENST00000358901 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
VCP-201ENST00000358901 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
VCP-201ENST00000358901 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
VCP-201ENST00000358901 ATMQ13315 3056 aa8.87□□□□□ -0.99
VCP-201ENST00000358901 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
VCP-201ENST00000358901 FLNCQ14315 2725 aa8.87□□□□□ -0.99
VCP-201ENST00000358901 IGSF10Q6WRI0 2623 aa8.87□□□□□ -0.99
VCP-201ENST00000358901 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
VCP-201ENST00000358901 CFAP47Q6ZTR5 3102 aa8.86□□□□□ -0.99
VCP-201ENST00000358901 DMXL1Q9Y485 3027 aa8.86□□□□□ -0.99
VCP-201ENST00000358901 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
VCP-201ENST00000358901 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms