RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 BCE1O60756 84 aa9.38□□□□□ -0.91
TPM1-206ENST00000358278 FXYD2P54710 66 aa9.38□□□□□ -0.91
TPM1-206ENST00000358278 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
TPM1-206ENST00000358278 CTAG1AP78358 180 aa9.37□□□□□ -0.91
TPM1-206ENST00000358278 IGLV7-43P04211 117 aa9.36□□□□□ -0.91
TPM1-206ENST00000358278 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
TPM1-206ENST00000358278 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
TPM1-206ENST00000358278 ETDCA0A1B0GVM5 59 aa9.35□□□□□ -0.91
TPM1-206ENST00000358278 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
TPM1-206ENST00000358278 CFC1P0CG37 223 aa9.35□□□□□ -0.91
TPM1-206ENST00000358278 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
TPM1-206ENST00000358278 UBE2AP49459 152 aa9.35□□□□□ -0.91
TPM1-206ENST00000358278 A0A0B4J2C4 111 aa9.34□□□□□ -0.91
TPM1-206ENST00000358278 ZNF73O43830 326 aaPredicted RBP9.34□□□□□ -0.91
TPM1-206ENST00000358278 SPRR1AP35321 89 aa9.34□□□□□ -0.92
TPM1-206ENST00000358278 NHP2Q9NX24 153 aaKnown RBP9.34□□□□□ -0.92
TPM1-206ENST00000358278 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
TPM1-206ENST00000358278 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
TPM1-206ENST00000358278 PRLHP81277 87 aa9.33□□□□□ -0.92
TPM1-206ENST00000358278 DIRC1Q969H9 104 aa9.33□□□□□ -0.92
TPM1-206ENST00000358278 M0R143 59 aa9.32□□□□□ -0.92
TPM1-206ENST00000358278 BVES-AS1Q5T3Y7 98 aa9.32□□□□□ -0.92
TPM1-206ENST00000358278 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
TPM1-206ENST00000358278 H7C2G1 150 aa9.31□□□□□ -0.92
TPM1-206ENST00000358278 ZNF861PO60384 105 aa9.31□□□□□ -0.92
TPM1-206ENST00000358278 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
TPM1-206ENST00000358278 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
TPM1-206ENST00000358278 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
TPM1-206ENST00000358278 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
TPM1-206ENST00000358278 SPINK6Q6UWN8 80 aa9.29□□□□□ -0.92
TPM1-206ENST00000358278 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
TPM1-206ENST00000358278 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
TPM1-206ENST00000358278 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
TPM1-206ENST00000358278 B5MCH6 92 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 K7ERJ3 54 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 BATFQ16520 125 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 Q1RN00 199 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 Q6ZRX8 168 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 H0Y9J4 135 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 HIGD2AQ9BW72 106 aa9.28□□□□□ -0.92
TPM1-206ENST00000358278 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
TPM1-206ENST00000358278 INAFM2P0DMQ5 153 aa9.26□□□□□ -0.93
TPM1-206ENST00000358278 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
TPM1-206ENST00000358278 COX7BP24311 80 aa9.25□□□□□ -0.93
TPM1-206ENST00000358278 ELOF1P60002 83 aaKnown RBP9.25□□□□□ -0.93
TPM1-206ENST00000358278 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
TPM1-206ENST00000358278 VAMP3Q15836 100 aa9.24□□□□□ -0.93
TPM1-206ENST00000358278 ABCA13Q86UQ4 5058 aa9.24□□□□□ -0.93
TPM1-206ENST00000358278 Q9BRP9 147 aa9.23□□□□□ -0.93
TPM1-206ENST00000358278 SMCR5Q8TEV8 140 aa9.22□□□□□ -0.93
TPM1-206ENST00000358278 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
TPM1-206ENST00000358278 MYCBP2O75592 4640 aa9.21□□□□□ -0.94
TPM1-206ENST00000358278 TSPAN13O95857 204 aa9.19□□□□□ -0.94
TPM1-206ENST00000358278 PSMB2P49721 201 aa9.19□□□□□ -0.94
TPM1-206ENST00000358278 SLC25A20O43772 301 aa9.18□□□□□ -0.94
TPM1-206ENST00000358278 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
TPM1-206ENST00000358278 TRIAP1O43715 76 aa9.17□□□□□ -0.94
TPM1-206ENST00000358278 SNHG12Q9BXW3 62 aa9.17□□□□□ -0.94
TPM1-206ENST00000358278 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
TPM1-206ENST00000358278 COX6CP09669 75 aa9.16□□□□□ -0.94
TPM1-206ENST00000358278 H0YGX0 51 aa9.15□□□□□ -0.94
TPM1-206ENST00000358278 LINC00575Q6W349 94 aa9.15□□□□□ -0.94
TPM1-206ENST00000358278 LRP1Q07954 4544 aaKnown RBP9.15□□□□□ -0.94
TPM1-206ENST00000358278 hADV29S1A0JD25 119 aa9.14□□□□□ -0.95
TPM1-206ENST00000358278 SPRR4Q96PI1 79 aa9.14□□□□□ -0.95
TPM1-206ENST00000358278 SNCGO76070 127 aa9.13□□□□□ -0.95
TPM1-206ENST00000358278 KRTAP1-4P0C5Y4 121 aa9.13□□□□□ -0.95
TPM1-206ENST00000358278 NAA38Q9BRA0 125 aaKnown RBP9.13□□□□□ -0.95
TPM1-206ENST00000358278 PCLOQ9Y6V0 5065 aa9.13□□□□□ -0.95
TPM1-206ENST00000358278 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
TPM1-206ENST00000358278 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
TPM1-206ENST00000358278 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
TPM1-206ENST00000358278 SCGB1C2P0DMR2 95 aa9.11□□□□□ -0.95
TPM1-206ENST00000358278 ANAPC11Q9NYG5 84 aa9.11□□□□□ -0.95
TPM1-206ENST00000358278 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
TPM1-206ENST00000358278 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
TPM1-206ENST00000358278 OXTP01178 125 aa9.09□□□□□ -0.95
TPM1-206ENST00000358278 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
TPM1-206ENST00000358278 COL5A1-AS1Q5SY13 56 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 Q6ZQY7 126 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 DEFB105AQ8NG35 78 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
TPM1-206ENST00000358278 CRYGAP11844 174 aa9.07□□□□□ -0.96
TPM1-206ENST00000358278 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
TPM1-206ENST00000358278 A0A087X002 238 aa9.06□□□□□ -0.96
TPM1-206ENST00000358278 A0A1B0GX51 115 aa9.06□□□□□ -0.96
TPM1-206ENST00000358278 H3BUT2 72 aa9.06□□□□□ -0.96
TPM1-206ENST00000358278 LYRM7Q5U5X0 104 aa9.06□□□□□ -0.96
TPM1-206ENST00000358278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
TPM1-206ENST00000358278 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
TPM1-206ENST00000358278 DNAL4O96015 105 aa9.05□□□□□ -0.96
TPM1-206ENST00000358278 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
TPM1-206ENST00000358278 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
TPM1-206ENST00000358278 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
TPM1-206ENST00000358278 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
TPM1-206ENST00000358278 SPRR1BP22528 89 aa9.02□□□□□ -0.96
TPM1-206ENST00000358278 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.96
TPM1-206ENST00000358278 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms