RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 INAFM1C9JVW0 142 aa6.8□□□□□ -1.32
RNF40-202ENST00000357890 COX17Q14061 63 aa6.8□□□□□ -1.32
RNF40-202ENST00000357890 ITPR2Q14571 2701 aa6.79□□□□□ -1.32
RNF40-202ENST00000357890 UBE2BP63146 152 aa6.79□□□□□ -1.32
RNF40-202ENST00000357890 H3BQ85 93 aa6.79□□□□□ -1.32
RNF40-202ENST00000357890 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
RNF40-202ENST00000357890 X6R8D5 127 aa6.78□□□□□ -1.32
RNF40-202ENST00000357890 A6NED7 52 aa6.78□□□□□ -1.32
RNF40-202ENST00000357890 BCE1O60756 84 aa6.78□□□□□ -1.32
RNF40-202ENST00000357890 KRTAP1-1Q07627 177 aa6.78□□□□□ -1.32
RNF40-202ENST00000357890 IGKV2D-24A0A075B6R9 120 aa6.77□□□□□ -1.33
RNF40-202ENST00000357890 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
RNF40-202ENST00000357890 ETDCA0A1B0GVM5 59 aa6.77□□□□□ -1.33
RNF40-202ENST00000357890 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
RNF40-202ENST00000357890 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
RNF40-202ENST00000357890 A8MUN3 132 aa6.75□□□□□ -1.33
RNF40-202ENST00000357890 LINC00208Q96KT6 92 aa6.75□□□□□ -1.33
RNF40-202ENST00000357890 RPL37AP8A6NKH3 93 aa6.74□□□□□ -1.33
RNF40-202ENST00000357890 LELP1Q5T871 98 aa6.74□□□□□ -1.33
RNF40-202ENST00000357890 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
RNF40-202ENST00000357890 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
RNF40-202ENST00000357890 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
RNF40-202ENST00000357890 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
RNF40-202ENST00000357890 A0A096LNI7 61 aa6.71□□□□□ -1.34
RNF40-202ENST00000357890 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
RNF40-202ENST00000357890 M0R378 163 aa6.7□□□□□ -1.34
RNF40-202ENST00000357890 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
RNF40-202ENST00000357890 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
RNF40-202ENST00000357890 IGHV4-30-4P0DP06 118 aa6.7□□□□□ -1.34
RNF40-202ENST00000357890 Q8NDZ9 215 aa6.69□□□□□ -1.34
RNF40-202ENST00000357890 NDUFS5O43920 106 aa6.69□□□□□ -1.34
RNF40-202ENST00000357890 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
RNF40-202ENST00000357890 KPRPQ5T749 579 aaPredicted RBP6.69□□□□□ -1.34
RNF40-202ENST00000357890 TRAV22A0A0B4J277 110 aa6.68□□□□□ -1.34
RNF40-202ENST00000357890 C6orf48Q9UBA6 75 aa6.68□□□□□ -1.34
RNF40-202ENST00000357890 UBE2AP49459 152 aa6.67□□□□□ -1.34
RNF40-202ENST00000357890 H0Y9J4 135 aa6.67□□□□□ -1.34
RNF40-202ENST00000357890 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
RNF40-202ENST00000357890 Q8NAQ8 132 aa6.66□□□□□ -1.34
RNF40-202ENST00000357890 NDUFB1O75438 58 aa6.66□□□□□ -1.34
RNF40-202ENST00000357890 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
RNF40-202ENST00000357890 OXLD1Q5BKU9 147 aa6.65□□□□□ -1.34
RNF40-202ENST00000357890 EPM2AB3EWF7 344 aa6.65□□□□□ -1.34
RNF40-202ENST00000357890 ELOF1P60002 83 aaKnown RBP6.65□□□□□ -1.34
RNF40-202ENST00000357890 Q6ZRU5 148 aa6.65□□□□□ -1.35
RNF40-202ENST00000357890 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
RNF40-202ENST00000357890 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
RNF40-202ENST00000357890 Q6ZTC4 211 aa6.64□□□□□ -1.35
RNF40-202ENST00000357890 hDV103S1A0JD37 113 aa6.63□□□□□ -1.35
RNF40-202ENST00000357890 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
RNF40-202ENST00000357890 EGFEM1PQ0D2K5 195 aa6.63□□□□□ -1.35
RNF40-202ENST00000357890 OCR1Q9BZK8 76 aa6.63□□□□□ -1.35
RNF40-202ENST00000357890 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
RNF40-202ENST00000357890 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 K7EQZ3 153 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 DEFB131BA0A096LNP1 70 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
RNF40-202ENST00000357890 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
RNF40-202ENST00000357890 ST20-AS1Q8NBB2 130 aa6.61□□□□□ -1.35
RNF40-202ENST00000357890 A0A087WSZ3 146 aa6.61□□□□□ -1.35
RNF40-202ENST00000357890 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
RNF40-202ENST00000357890 Q6ZRP5 223 aa6.61□□□□□ -1.35
RNF40-202ENST00000357890 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
RNF40-202ENST00000357890 H0Y9P7 68 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 PSCAO43653 123 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 C11orf45Q8TAV5 145 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 CD164Q04900 197 aa6.6□□□□□ -1.35
RNF40-202ENST00000357890 HIVEP1P15822 2718 aa6.59□□□□□ -1.35
RNF40-202ENST00000357890 VWFP04275 2813 aa6.59□□□□□ -1.35
RNF40-202ENST00000357890 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
RNF40-202ENST00000357890 RPL37AP61513 92 aaKnown RBP6.58□□□□□ -1.36
RNF40-202ENST00000357890 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
RNF40-202ENST00000357890 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
RNF40-202ENST00000357890 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
RNF40-202ENST00000357890 VPREB1P12018 145 aa6.57□□□□□ -1.36
RNF40-202ENST00000357890 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
RNF40-202ENST00000357890 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
RNF40-202ENST00000357890 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
RNF40-202ENST00000357890 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
RNF40-202ENST00000357890 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
RNF40-202ENST00000357890 H3BNG1 76 aa6.56□□□□□ -1.36
RNF40-202ENST00000357890 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
RNF40-202ENST00000357890 Q8NBF4 154 aa6.55□□□□□ -1.36
RNF40-202ENST00000357890 Q8N377 158 aa6.55□□□□□ -1.36
RNF40-202ENST00000357890 KRTAP24-1Q3LI83 254 aa6.54□□□□□ -1.36
RNF40-202ENST00000357890 A8MU10 97 aa6.54□□□□□ -1.36
RNF40-202ENST00000357890 Q1T7F1 81 aa6.53□□□□□ -1.36
RNF40-202ENST00000357890 A0A1W2PNM2 257 aa6.53□□□□□ -1.36
RNF40-202ENST00000357890 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
RNF40-202ENST00000357890 PDZD2O15018 2839 aa6.52□□□□□ -1.37
RNF40-202ENST00000357890 PRLHP81277 87 aa6.52□□□□□ -1.37
RNF40-202ENST00000357890 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
RNF40-202ENST00000357890 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
RNF40-202ENST00000357890 TENM1Q9UKZ4 2725 aa6.51□□□□□ -1.37
RNF40-202ENST00000357890 C15orf56Q8N910 161 aa6.51□□□□□ -1.37
RNF40-202ENST00000357890 LINC01556Q5JQF7 62 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms