RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ATMQ13315 3056 aa4.96□□□□□ -1.62
CCR9-201ENST00000355983 CELSR1Q9NYQ6 3014 aa4.96□□□□□ -1.62
CCR9-201ENST00000355983 CAMK2N2Q96S95 79 aa4.95□□□□□ -1.62
CCR9-201ENST00000355983 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
CCR9-201ENST00000355983 PRR26Q8N8Z3 221 aa4.95□□□□□ -1.62
CCR9-201ENST00000355983 IGLV8-61A0A075B6I0 122 aa4.94□□□□□ -1.62
CCR9-201ENST00000355983 X6R8D5 127 aa4.94□□□□□ -1.62
CCR9-201ENST00000355983 MAP1AP78559 2803 aaPredicted RBP4.94□□□□□ -1.62
CCR9-201ENST00000355983 TLN1Q9Y490 2541 aaKnown RBP4.93□□□□□ -1.62
CCR9-201ENST00000355983 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 C7orf33Q8WU49 177 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 ASH1LQ9NR48 2969 aaKnown RBP4.93□□□□□ -1.62
CCR9-201ENST00000355983 NOTCH3Q9UM47 2321 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 SPTA1P02549 2419 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 ZNF462Q96JM2 2506 aa4.93□□□□□ -1.62
CCR9-201ENST00000355983 A0A096LPF7 62 aa4.92□□□□□ -1.62
CCR9-201ENST00000355983 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
CCR9-201ENST00000355983 BAHCC1Q9P281 2608 aa4.92□□□□□ -1.62
CCR9-201ENST00000355983 KRTAP26-1Q6PEX3 210 aa4.92□□□□□ -1.62
CCR9-201ENST00000355983 ZFHX2Q9C0A1 2572 aaPredicted RBP4.92□□□□□ -1.62
CCR9-201ENST00000355983 TLX1NBP0CAT3 122 aa4.91□□□□□ -1.62
CCR9-201ENST00000355983 RELNP78509 3460 aa4.91□□□□□ -1.62
CCR9-201ENST00000355983 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.62
CCR9-201ENST00000355983 SVEP1Q4LDE5 3571 aa4.9□□□□□ -1.62
CCR9-201ENST00000355983 RPL37AP8A6NKH3 93 aa4.9□□□□□ -1.63
CCR9-201ENST00000355983 IGLV1-50A0A075B6I6 118 aa4.9□□□□□ -1.63
CCR9-201ENST00000355983 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
CCR9-201ENST00000355983 PIEZO1Q92508 2521 aa4.89□□□□□ -1.63
CCR9-201ENST00000355983 PRB2P02812 416 aaPredicted RBP4.89□□□□□ -1.63
CCR9-201ENST00000355983 LINC00313P59037 77 aa4.89□□□□□ -1.63
CCR9-201ENST00000355983 C15orf56Q8N910 161 aa4.89□□□□□ -1.63
CCR9-201ENST00000355983 LINC00476Q8WZB0 136 aa4.89□□□□□ -1.63
CCR9-201ENST00000355983 RIF1Q5UIP0 2472 aaKnown RBP4.89□□□□□ -1.63
CCR9-201ENST00000355983 CSPG4Q6UVK1 2322 aa4.89□□□□□ -1.63
CCR9-201ENST00000355983 SERTAD4-AS1Q5TG53 156 aa4.88□□□□□ -1.63
CCR9-201ENST00000355983 Q8NAQ8 132 aa4.88□□□□□ -1.63
CCR9-201ENST00000355983 A8MWP4 228 aa4.88□□□□□ -1.63
CCR9-201ENST00000355983 WFDC10BQ8IUB3 73 aa4.88□□□□□ -1.63
CCR9-201ENST00000355983 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
CCR9-201ENST00000355983 SPINK7P58062 85 aa4.87□□□□□ -1.63
CCR9-201ENST00000355983 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
CCR9-201ENST00000355983 HIVEP3Q5T1R4 2406 aa4.86□□□□□ -1.63
CCR9-201ENST00000355983 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
CCR9-201ENST00000355983 KMT2BQ9UMN6 2715 aaPredicted RBP4.85□□□□□ -1.63
CCR9-201ENST00000355983 Q6ZR54 194 aa4.85□□□□□ -1.63
CCR9-201ENST00000355983 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
CCR9-201ENST00000355983 COL12A1Q99715 3063 aa4.84□□□□□ -1.63
CCR9-201ENST00000355983 H3BNG1 76 aa4.84□□□□□ -1.63
CCR9-201ENST00000355983 DEFB116Q30KQ4 102 aa4.84□□□□□ -1.63
CCR9-201ENST00000355983 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
CCR9-201ENST00000355983 CEP295Q9C0D2 2601 aa4.83□□□□□ -1.64
CCR9-201ENST00000355983 A0A087WSZ3 146 aa4.83□□□□□ -1.64
CCR9-201ENST00000355983 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 CHD6Q8TD26 2715 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 RTL8CO15255 209 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 HRES1P13985 223 aa4.82□□□□□ -1.64
CCR9-201ENST00000355983 ATRXP46100 2492 aa4.81□□□□□ -1.64
CCR9-201ENST00000355983 SPART-AS1P0CW21 52 aa4.81□□□□□ -1.64
CCR9-201ENST00000355983 ITPR1Q14643 2758 aa4.81□□□□□ -1.64
CCR9-201ENST00000355983 NBASA2RRP1 2371 aa4.81□□□□□ -1.64
CCR9-201ENST00000355983 NBPF19A0A087WUL8 3843 aa4.8□□□□□ -1.64
CCR9-201ENST00000355983 SPRR1BP22528 89 aa4.8□□□□□ -1.64
CCR9-201ENST00000355983 RPL37AP61513 92 aaKnown RBP4.8□□□□□ -1.64
CCR9-201ENST00000355983 SPG11Q96JI7 2443 aa4.8□□□□□ -1.64
CCR9-201ENST00000355983 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 MDFIQ99750 246 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 SPATA8Q6RVD6 105 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 SETXQ7Z333 2677 aaKnown RBP4.79□□□□□ -1.64
CCR9-201ENST00000355983 SPTBN4Q9H254 2564 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 IGKV2-24A0A0C4DH68 120 aa4.79□□□□□ -1.64
CCR9-201ENST00000355983 NCOR2Q9Y618 2525 aa4.78□□□□□ -1.64
CCR9-201ENST00000355983 TLN2Q9Y4G6 2542 aa4.77□□□□□ -1.65
CCR9-201ENST00000355983 J3QL48 77 aa4.77□□□□□ -1.65
CCR9-201ENST00000355983 LINC01556Q5JQF7 62 aa4.77□□□□□ -1.65
CCR9-201ENST00000355983 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
CCR9-201ENST00000355983 AKAP9Q99996 3911 aa4.76□□□□□ -1.65
CCR9-201ENST00000355983 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
CCR9-201ENST00000355983 RETNLBQ9BQ08 111 aa4.76□□□□□ -1.65
CCR9-201ENST00000355983 MAPK1IP1LQ8NDC0 245 aa4.75□□□□□ -1.65
CCR9-201ENST00000355983 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
CCR9-201ENST00000355983 CELSR2Q9HCU4 2923 aa4.75□□□□□ -1.65
CCR9-201ENST00000355983 MXRA5Q9NR99 2828 aa4.74□□□□□ -1.65
CCR9-201ENST00000355983 H0Y9J4 135 aa4.74□□□□□ -1.65
CCR9-201ENST00000355983 DEFB135Q30KP9 77 aa4.74□□□□□ -1.65
CCR9-201ENST00000355983 FAM168BA1KXE4 195 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 APCP25054 2843 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 DEFB4AO15263 64 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 JMJD1CQ15652 2540 aa4.73□□□□□ -1.65
CCR9-201ENST00000355983 ACYP2P14621 99 aa4.72□□□□□ -1.65
CCR9-201ENST00000355983 HTN3P15516 51 aa4.72□□□□□ -1.65
CCR9-201ENST00000355983 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
CCR9-201ENST00000355983 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
CCR9-201ENST00000355983 C8orf17Q9NRJ1 99 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms