RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
PDLIM7-201ENST00000355572 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
PDLIM7-201ENST00000355572 HERV-K104P63124 156 aa9.67□□□□□ -0.86
PDLIM7-201ENST00000355572 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
PDLIM7-201ENST00000355572 SNHG12Q9BXW3 62 aa9.67□□□□□ -0.86
PDLIM7-201ENST00000355572 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
PDLIM7-201ENST00000355572 C2orf91Q6ZV80 131 aa9.66□□□□□ -0.86
PDLIM7-201ENST00000355572 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
PDLIM7-201ENST00000355572 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
PDLIM7-201ENST00000355572 PRYO14603 147 aa9.65□□□□□ -0.86
PDLIM7-201ENST00000355572 J3QQQ9 107 aa9.64□□□□□ -0.87
PDLIM7-201ENST00000355572 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
PDLIM7-201ENST00000355572 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
PDLIM7-201ENST00000355572 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
PDLIM7-201ENST00000355572 HSD52Q0P140 79 aa9.63□□□□□ -0.87
PDLIM7-201ENST00000355572 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
PDLIM7-201ENST00000355572 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
PDLIM7-201ENST00000355572 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
PDLIM7-201ENST00000355572 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
PDLIM7-201ENST00000355572 ERC2-IT1O76042 136 aa9.61□□□□□ -0.87
PDLIM7-201ENST00000355572 TAL2Q16559 108 aa9.61□□□□□ -0.87
PDLIM7-201ENST00000355572 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
PDLIM7-201ENST00000355572 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
PDLIM7-201ENST00000355572 NPC2P61916 151 aa9.6□□□□□ -0.87
PDLIM7-201ENST00000355572 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
PDLIM7-201ENST00000355572 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
PDLIM7-201ENST00000355572 B5MCH6 92 aa9.58□□□□□ -0.88
PDLIM7-201ENST00000355572 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
PDLIM7-201ENST00000355572 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
PDLIM7-201ENST00000355572 Q9BRP9 147 aa9.58□□□□□ -0.88
PDLIM7-201ENST00000355572 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
PDLIM7-201ENST00000355572 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
PDLIM7-201ENST00000355572 MUC2Q02817 5179 aa9.56□□□□□ -0.88
PDLIM7-201ENST00000355572 ETDCA0A1B0GVM5 59 aa9.56□□□□□ -0.88
PDLIM7-201ENST00000355572 BATFQ16520 125 aa9.55□□□□□ -0.88
PDLIM7-201ENST00000355572 LITAFQ99732 161 aa9.55□□□□□ -0.88
PDLIM7-201ENST00000355572 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
PDLIM7-201ENST00000355572 SPANXB1Q9NS25 103 aaPredicted RBP9.55□□□□□ -0.88
PDLIM7-201ENST00000355572 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
PDLIM7-201ENST00000355572 A6NDN8 102 aa9.54□□□□□ -0.88
PDLIM7-201ENST00000355572 IGLV6-57P01721 117 aa9.54□□□□□ -0.88
PDLIM7-201ENST00000355572 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
PDLIM7-201ENST00000355572 LINC00483Q53H64 154 aa9.53□□□□□ -0.88
PDLIM7-201ENST00000355572 SCGB1D4Q6XE38 83 aa9.53□□□□□ -0.88
PDLIM7-201ENST00000355572 Q8NBF4 154 aa9.53□□□□□ -0.88
PDLIM7-201ENST00000355572 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
PDLIM7-201ENST00000355572 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
PDLIM7-201ENST00000355572 NDUFC2O95298 119 aa9.51□□□□□ -0.89
PDLIM7-201ENST00000355572 CEND1Q8N111 149 aa9.51□□□□□ -0.89
PDLIM7-201ENST00000355572 ZNF706Q9Y5V0 76 aaPredicted RBP9.51□□□□□ -0.89
PDLIM7-201ENST00000355572 Q6ZRX8 168 aa9.5□□□□□ -0.89
PDLIM7-201ENST00000355572 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
PDLIM7-201ENST00000355572 A6NJY4 79 aa9.49□□□□□ -0.89
PDLIM7-201ENST00000355572 TIMM17BO60830 172 aa9.49□□□□□ -0.89
PDLIM7-201ENST00000355572 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
PDLIM7-201ENST00000355572 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
PDLIM7-201ENST00000355572 Q6ZVH6 145 aa9.48□□□□□ -0.89
PDLIM7-201ENST00000355572 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
PDLIM7-201ENST00000355572 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
PDLIM7-201ENST00000355572 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
PDLIM7-201ENST00000355572 IGLV9-49A0A0B4J1Y8 123 aa9.46□□□□□ -0.9
PDLIM7-201ENST00000355572 A0A1B0GV90 55 aa9.46□□□□□ -0.9
PDLIM7-201ENST00000355572 MOBPQ13875 183 aa9.46□□□□□ -0.9
PDLIM7-201ENST00000355572 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.9
PDLIM7-201ENST00000355572 A0A1B0GWB2 263 aa9.45□□□□□ -0.9
PDLIM7-201ENST00000355572 FXYD2P54710 66 aa9.45□□□□□ -0.9
PDLIM7-201ENST00000355572 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
PDLIM7-201ENST00000355572 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
PDLIM7-201ENST00000355572 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
PDLIM7-201ENST00000355572 TAX1BP3O14907 124 aa9.44□□□□□ -0.9
PDLIM7-201ENST00000355572 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
PDLIM7-201ENST00000355572 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
PDLIM7-201ENST00000355572 CDIP1Q9H305 208 aa9.42□□□□□ -0.9
PDLIM7-201ENST00000355572 IFITM1P13164 125 aa9.41□□□□□ -0.9
PDLIM7-201ENST00000355572 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
PDLIM7-201ENST00000355572 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.9
PDLIM7-201ENST00000355572 C9orf118A6NHY6 69 aa9.39□□□□□ -0.91
PDLIM7-201ENST00000355572 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
PDLIM7-201ENST00000355572 Q8N377 158 aa9.39□□□□□ -0.91
PDLIM7-201ENST00000355572 SPINK1P00995 79 aa9.38□□□□□ -0.91
PDLIM7-201ENST00000355572 A0A0B4J2C4 111 aa9.37□□□□□ -0.91
PDLIM7-201ENST00000355572 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
PDLIM7-201ENST00000355572 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
PDLIM7-201ENST00000355572 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
PDLIM7-201ENST00000355572 FAT4Q6V0I7 4981 aa9.37□□□□□ -0.91
PDLIM7-201ENST00000355572 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
PDLIM7-201ENST00000355572 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
PDLIM7-201ENST00000355572 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
PDLIM7-201ENST00000355572 SPRR1BP22528 89 aa9.33□□□□□ -0.92
PDLIM7-201ENST00000355572 K7ERJ3 54 aa9.32□□□□□ -0.92
PDLIM7-201ENST00000355572 ELOF1P60002 83 aaKnown RBP9.32□□□□□ -0.92
PDLIM7-201ENST00000355572 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
PDLIM7-201ENST00000355572 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
PDLIM7-201ENST00000355572 MUSTN1Q8IVN3 82 aa9.32□□□□□ -0.92
PDLIM7-201ENST00000355572 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
PDLIM7-201ENST00000355572 A4D1N5 150 aa9.31□□□□□ -0.92
PDLIM7-201ENST00000355572 H3BUT2 72 aa9.31□□□□□ -0.92
PDLIM7-201ENST00000355572 FABP2P12104 132 aa9.31□□□□□ -0.92
PDLIM7-201ENST00000355572 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-201ENST00000355572 VAMP3Q15836 100 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms