RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 Q6ZRX8 168 aa8.19□□□□□ -1.1
COLCA1-201ENST00000355430 FRYQ5TBA9 3013 aa8.18□□□□□ -1.1
COLCA1-201ENST00000355430 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
COLCA1-201ENST00000355430 AKAP13Q12802 2813 aa8.17□□□□□ -1.1
COLCA1-201ENST00000355430 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
COLCA1-201ENST00000355430 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
COLCA1-201ENST00000355430 OBSCN-AS1Q96MR7 158 aa8.16□□□□□ -1.1
COLCA1-201ENST00000355430 Q8NBF4 154 aa8.16□□□□□ -1.1
COLCA1-201ENST00000355430 PCOTHQ58A44 107 aa8.16□□□□□ -1.1
COLCA1-201ENST00000355430 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
COLCA1-201ENST00000355430 SERTAD4-AS1Q5TG53 156 aa8.15□□□□□ -1.1
COLCA1-201ENST00000355430 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
COLCA1-201ENST00000355430 PRR34Q9NV39 138 aa8.15□□□□□ -1.1
COLCA1-201ENST00000355430 FAM168BA1KXE4 195 aa8.15□□□□□ -1.11
COLCA1-201ENST00000355430 MYO15AQ9UKN7 3530 aa8.15□□□□□ -1.11
COLCA1-201ENST00000355430 IGHV6-1A0A0B4J1U7 121 aa8.14□□□□□ -1.11
COLCA1-201ENST00000355430 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
COLCA1-201ENST00000355430 APLNQ9ULZ1 77 aa8.14□□□□□ -1.11
COLCA1-201ENST00000355430 LINC00476Q8WZB0 136 aa8.14□□□□□ -1.11
COLCA1-201ENST00000355430 COL6A3P12111 3177 aa8.14□□□□□ -1.11
COLCA1-201ENST00000355430 MGAM2Q2M2H8 2515 aa8.13□□□□□ -1.11
COLCA1-201ENST00000355430 FREM2Q5SZK8 3169 aa8.13□□□□□ -1.11
COLCA1-201ENST00000355430 USP34Q70CQ2 3546 aa8.13□□□□□ -1.11
COLCA1-201ENST00000355430 A0A087WTM6 91 aa8.12□□□□□ -1.11
COLCA1-201ENST00000355430 A0A1B0GW54 56 aa8.12□□□□□ -1.11
COLCA1-201ENST00000355430 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
COLCA1-201ENST00000355430 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
COLCA1-201ENST00000355430 TRBV7-4A0A0J9YYF1 115 aa8.11□□□□□ -1.11
COLCA1-201ENST00000355430 FLNAP21333 2647 aaKnown RBP8.11□□□□□ -1.11
COLCA1-201ENST00000355430 hDV103S1A0JD37 113 aa8.11□□□□□ -1.11
COLCA1-201ENST00000355430 MOBPQ13875 183 aa8.1□□□□□ -1.11
COLCA1-201ENST00000355430 ZNF292O60281 2723 aa8.1□□□□□ -1.11
COLCA1-201ENST00000355430 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
COLCA1-201ENST00000355430 ITPR3Q14573 2671 aa8.1□□□□□ -1.11
COLCA1-201ENST00000355430 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 H7BZZ5 65 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 KCNQ1DNQ9H478 68 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 USP24Q9UPU5 2620 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 CHTF8P0CG12 524 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 CASC10Q5T4H9 136 aa8.09□□□□□ -1.11
COLCA1-201ENST00000355430 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
COLCA1-201ENST00000355430 K7EQZ3 153 aa8.08□□□□□ -1.12
COLCA1-201ENST00000355430 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
COLCA1-201ENST00000355430 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
COLCA1-201ENST00000355430 Q8N377 158 aa8.06□□□□□ -1.12
COLCA1-201ENST00000355430 EPM2AB3EWF7 344 aa8.06□□□□□ -1.12
COLCA1-201ENST00000355430 WIPF1O43516 503 aa8.06□□□□□ -1.12
COLCA1-201ENST00000355430 BOD1L1Q8NFC6 3051 aa8.03□□□□□ -1.12
COLCA1-201ENST00000355430 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.12
COLCA1-201ENST00000355430 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
COLCA1-201ENST00000355430 BAHCC1Q9P281 2608 aa8.02□□□□□ -1.13
COLCA1-201ENST00000355430 CYSTM1Q9H1C7 97 aa8.01□□□□□ -1.13
COLCA1-201ENST00000355430 A0A0G2JQZ4 141 aa8.01□□□□□ -1.13
COLCA1-201ENST00000355430 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
COLCA1-201ENST00000355430 Q8NDZ9 215 aa8.01□□□□□ -1.13
COLCA1-201ENST00000355430 CR1P17927 2039 aa8.01□□□□□ -1.13
COLCA1-201ENST00000355430 C9orf163Q8N9P6 203 aa8□□□□□ -1.13
COLCA1-201ENST00000355430 MAST4O15021 2626 aa8□□□□□ -1.13
COLCA1-201ENST00000355430 ATRQ13535 2644 aa7.99□□□□□ -1.13
COLCA1-201ENST00000355430 K7ERS5 55 aa7.99□□□□□ -1.13
COLCA1-201ENST00000355430 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
COLCA1-201ENST00000355430 KALRNO60229 2985 aa7.97□□□□□ -1.13
COLCA1-201ENST00000355430 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
COLCA1-201ENST00000355430 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
COLCA1-201ENST00000355430 ADGRG4Q8IZF6 3080 aa7.95□□□□□ -1.14
COLCA1-201ENST00000355430 H3BPC8 53 aa7.95□□□□□ -1.14
COLCA1-201ENST00000355430 TRAV22A0A0B4J277 110 aa7.95□□□□□ -1.14
COLCA1-201ENST00000355430 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
COLCA1-201ENST00000355430 LINC00304Q8N9R0 145 aa7.94□□□□□ -1.14
COLCA1-201ENST00000355430 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
COLCA1-201ENST00000355430 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
COLCA1-201ENST00000355430 A8MWP4 228 aa7.93□□□□□ -1.14
COLCA1-201ENST00000355430 ZNF861PO60384 105 aa7.93□□□□□ -1.14
COLCA1-201ENST00000355430 LRBAP50851 2863 aa7.93□□□□□ -1.14
COLCA1-201ENST00000355430 ATP11AUNQ6ZP68 121 aa7.93□□□□□ -1.14
COLCA1-201ENST00000355430 CENPEQ02224 2701 aa7.92□□□□□ -1.14
COLCA1-201ENST00000355430 CNBPP62633 177 aaKnown RBP7.92□□□□□ -1.14
COLCA1-201ENST00000355430 TNP2Q05952 138 aa7.92□□□□□ -1.14
COLCA1-201ENST00000355430 A8MUN3 132 aa7.91□□□□□ -1.14
COLCA1-201ENST00000355430 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
COLCA1-201ENST00000355430 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
COLCA1-201ENST00000355430 LINC00313P59037 77 aa7.89□□□□□ -1.15
COLCA1-201ENST00000355430 KRTAP21-3Q3LHN1 58 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 SSBP3-AS1Q7Z2R9 100 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
COLCA1-201ENST00000355430 PRR15Q8IV56 129 aa7.87□□□□□ -1.15
COLCA1-201ENST00000355430 MAP1AP78559 2803 aaPredicted RBP7.87□□□□□ -1.15
COLCA1-201ENST00000355430 LCE6AA0A183 80 aa7.87□□□□□ -1.15
COLCA1-201ENST00000355430 Q5XG85 94 aa7.86□□□□□ -1.15
COLCA1-201ENST00000355430 COA5Q86WW8 74 aa7.85□□□□□ -1.15
COLCA1-201ENST00000355430 Q96NJ1 140 aa7.84□□□□□ -1.15
COLCA1-201ENST00000355430 TNRC18O15417 2968 aaPredicted RBP7.84□□□□□ -1.15
COLCA1-201ENST00000355430 ZZEF1O43149 2961 aa7.84□□□□□ -1.15
COLCA1-201ENST00000355430 LOC400499M0QZD8 3231 aa7.84□□□□□ -1.15
COLCA1-201ENST00000355430 TACC2O95359 2948 aa7.84□□□□□ -1.15
COLCA1-201ENST00000355430 SETXQ7Z333 2677 aaKnown RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms