RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
SYNE1-203ENST00000354674 ATP5EP2Q5VTU8 51 aa6.81□□□□□ -1.32
SYNE1-203ENST00000354674 Q6ZRP5 223 aa6.8□□□□□ -1.32
SYNE1-203ENST00000354674 A8MUN3 132 aa6.8□□□□□ -1.32
SYNE1-203ENST00000354674 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
SYNE1-203ENST00000354674 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 TMEM256-PLSCR3K7ERE1 68 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 PRYO14603 147 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 CD164Q04900 197 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
SYNE1-203ENST00000354674 C9orf116Q5BN46 136 aaPredicted RBP6.78□□□□□ -1.32
SYNE1-203ENST00000354674 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
SYNE1-203ENST00000354674 UBE2L6O14933 153 aa6.78□□□□□ -1.32
SYNE1-203ENST00000354674 Q6ZQT0 140 aa6.77□□□□□ -1.33
SYNE1-203ENST00000354674 LELP1Q5T871 98 aa6.77□□□□□ -1.33
SYNE1-203ENST00000354674 CDC42SE2Q9NRR3 84 aa6.77□□□□□ -1.33
SYNE1-203ENST00000354674 A0A1B0GUV1 79 aa6.76□□□□□ -1.33
SYNE1-203ENST00000354674 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
SYNE1-203ENST00000354674 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 TRAV22A0A0B4J277 110 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 NDUFC1O43677 76 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 Q6ZQY7 126 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 Q6ZRU5 148 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
SYNE1-203ENST00000354674 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
SYNE1-203ENST00000354674 C3orf84H3BNL1 204 aa6.74□□□□□ -1.33
SYNE1-203ENST00000354674 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
SYNE1-203ENST00000354674 TRBV10-3A0A0K0K1G6 114 aa6.73□□□□□ -1.33
SYNE1-203ENST00000354674 IBA57-AS1B1ANH7 110 aa6.73□□□□□ -1.33
SYNE1-203ENST00000354674 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
SYNE1-203ENST00000354674 IGLV10-54A0A075B6I4 117 aa6.71□□□□□ -1.34
SYNE1-203ENST00000354674 Q8NDZ9 215 aa6.71□□□□□ -1.34
SYNE1-203ENST00000354674 STAB2Q8WWQ8 2551 aa6.7□□□□□ -1.34
SYNE1-203ENST00000354674 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
SYNE1-203ENST00000354674 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
SYNE1-203ENST00000354674 hDV103S1A0JD37 113 aa6.7□□□□□ -1.34
SYNE1-203ENST00000354674 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
SYNE1-203ENST00000354674 FBN3Q75N90 2809 aa6.7□□□□□ -1.34
SYNE1-203ENST00000354674 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 DEFB116Q30KQ4 102 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 LINC00269Q8N2A0 174 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 MUC7Q8TAX7 377 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 PRR34Q9NV39 138 aa6.69□□□□□ -1.34
SYNE1-203ENST00000354674 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
SYNE1-203ENST00000354674 LINC00959A0A1B0GUT2 108 aa6.68□□□□□ -1.34
SYNE1-203ENST00000354674 NUPR2A6NF83 97 aa6.68□□□□□ -1.34
SYNE1-203ENST00000354674 H3BS24 57 aa6.68□□□□□ -1.34
SYNE1-203ENST00000354674 SMIM29Q86T20 159 aa6.67□□□□□ -1.34
SYNE1-203ENST00000354674 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
SYNE1-203ENST00000354674 DNAH10OSP0CZ25 163 aa6.67□□□□□ -1.34
SYNE1-203ENST00000354674 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
SYNE1-203ENST00000354674 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
SYNE1-203ENST00000354674 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
SYNE1-203ENST00000354674 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
SYNE1-203ENST00000354674 REG3AQ06141 175 aa6.66□□□□□ -1.34
SYNE1-203ENST00000354674 IGHV3OR16-9A0A0B4J2B5 98 aa6.65□□□□□ -1.34
SYNE1-203ENST00000354674 CXCL6P80162 114 aa6.65□□□□□ -1.34
SYNE1-203ENST00000354674 LINC00575Q6W349 94 aa6.65□□□□□ -1.34
SYNE1-203ENST00000354674 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
SYNE1-203ENST00000354674 C16orf90A8MZG2 172 aa6.65□□□□□ -1.35
SYNE1-203ENST00000354674 OCR1Q9BZK8 76 aa6.65□□□□□ -1.35
SYNE1-203ENST00000354674 M0R378 163 aa6.64□□□□□ -1.35
SYNE1-203ENST00000354674 KTN1-AS1Q86SY8 53 aa6.64□□□□□ -1.35
SYNE1-203ENST00000354674 PRR15LQ9BU68 103 aa6.64□□□□□ -1.35
SYNE1-203ENST00000354674 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
SYNE1-203ENST00000354674 IGKV4-1P06312 121 aa6.63□□□□□ -1.35
SYNE1-203ENST00000354674 LYSTQ99698 3801 aa6.63□□□□□ -1.35
SYNE1-203ENST00000354674 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
SYNE1-203ENST00000354674 A6NED7 52 aa6.62□□□□□ -1.35
SYNE1-203ENST00000354674 BCE1O60756 84 aa6.62□□□□□ -1.35
SYNE1-203ENST00000354674 Q1T7F1 81 aa6.62□□□□□ -1.35
SYNE1-203ENST00000354674 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
SYNE1-203ENST00000354674 LINC00167Q96N53 147 aa6.62□□□□□ -1.35
SYNE1-203ENST00000354674 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
SYNE1-203ENST00000354674 Q5VV11 94 aa6.61□□□□□ -1.35
SYNE1-203ENST00000354674 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
SYNE1-203ENST00000354674 ST20-AS1Q8NBB2 130 aa6.61□□□□□ -1.35
SYNE1-203ENST00000354674 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
SYNE1-203ENST00000354674 PSCAO43653 123 aa6.59□□□□□ -1.35
SYNE1-203ENST00000354674 WWC2-AS2Q96NR7 200 aa6.59□□□□□ -1.35
SYNE1-203ENST00000354674 UBE2BP63146 152 aa6.59□□□□□ -1.35
SYNE1-203ENST00000354674 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-203ENST00000354674 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
SYNE1-203ENST00000354674 LCA10Q71F78 164 aa6.58□□□□□ -1.36
SYNE1-203ENST00000354674 DIRC1Q969H9 104 aa6.58□□□□□ -1.36
SYNE1-203ENST00000354674 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
SYNE1-203ENST00000354674 UNQ6190/PRO20217Q6UXQ8 127 aa6.56□□□□□ -1.36
SYNE1-203ENST00000354674 UBE2DNLQ8IWF7 75 aa6.56□□□□□ -1.36
SYNE1-203ENST00000354674 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
SYNE1-203ENST00000354674 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
SYNE1-203ENST00000354674 Q8IZM0 81 aa6.55□□□□□ -1.36
SYNE1-203ENST00000354674 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
SYNE1-203ENST00000354674 HIGD2BQ4VC39 106 aa6.55□□□□□ -1.36
SYNE1-203ENST00000354674 CASC10Q5T4H9 136 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms