RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 MUC3AQ02505 3323 aa9.12□□□□□ -0.95
SMC6-201ENST00000351948 Q6JHZ5 121 aa9.12□□□□□ -0.95
SMC6-201ENST00000351948 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
SMC6-201ENST00000351948 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
SMC6-201ENST00000351948 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
SMC6-201ENST00000351948 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
SMC6-201ENST00000351948 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
SMC6-201ENST00000351948 UQCRQO14949 82 aa9.1□□□□□ -0.95
SMC6-201ENST00000351948 Q6ZVQ6 151 aa9.09□□□□□ -0.95
SMC6-201ENST00000351948 ASH1LQ9NR48 2969 aaKnown RBP9.09□□□□□ -0.95
SMC6-201ENST00000351948 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
SMC6-201ENST00000351948 VPREB1P12018 145 aa9.08□□□□□ -0.96
SMC6-201ENST00000351948 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
SMC6-201ENST00000351948 ELOF1P60002 83 aaKnown RBP9.08□□□□□ -0.96
SMC6-201ENST00000351948 Q6ZRX8 168 aa9.08□□□□□ -0.96
SMC6-201ENST00000351948 APCP25054 2843 aa9.08□□□□□ -0.96
SMC6-201ENST00000351948 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
SMC6-201ENST00000351948 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
SMC6-201ENST00000351948 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
SMC6-201ENST00000351948 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
SMC6-201ENST00000351948 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
SMC6-201ENST00000351948 CCDC179H3BU77 68 aa9.04□□□□□ -0.96
SMC6-201ENST00000351948 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
SMC6-201ENST00000351948 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
SMC6-201ENST00000351948 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.96
SMC6-201ENST00000351948 A0A087WTM6 91 aa9.02□□□□□ -0.97
SMC6-201ENST00000351948 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 CELSR2Q9HCU4 2923 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 WDFY3Q8IZQ1 3526 aa9.01□□□□□ -0.97
SMC6-201ENST00000351948 C9orf129Q5T035 196 aaKnown RBP9□□□□□ -0.97
SMC6-201ENST00000351948 J3KT08 172 aa9□□□□□ -0.97
SMC6-201ENST00000351948 IGLV6-57P01721 117 aa9□□□□□ -0.97
SMC6-201ENST00000351948 RELNP78509 3460 aa8.99□□□□□ -0.97
SMC6-201ENST00000351948 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
SMC6-201ENST00000351948 BCE1O60756 84 aa8.99□□□□□ -0.97
SMC6-201ENST00000351948 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
SMC6-201ENST00000351948 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
SMC6-201ENST00000351948 COX7CP15954 63 aa8.98□□□□□ -0.97
SMC6-201ENST00000351948 LAMA5O15230 3695 aa8.98□□□□□ -0.97
SMC6-201ENST00000351948 CRYGAP11844 174 aa8.97□□□□□ -0.97
SMC6-201ENST00000351948 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
SMC6-201ENST00000351948 SEC61GP60059 68 aa8.97□□□□□ -0.97
SMC6-201ENST00000351948 ASPMQ8IZT6 3477 aa8.97□□□□□ -0.97
SMC6-201ENST00000351948 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
SMC6-201ENST00000351948 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.98
SMC6-201ENST00000351948 CDIP1Q9H305 208 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 A0A0G2JQZ4 141 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 Q6Q795 121 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 LIMD2Q9BT23 127 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
SMC6-201ENST00000351948 KMT2BQ9UMN6 2715 aaPredicted RBP8.93□□□□□ -0.98
SMC6-201ENST00000351948 WIPF1O43516 503 aa8.93□□□□□ -0.98
SMC6-201ENST00000351948 PLA2G1BP04054 148 aaKnown RBP8.93□□□□□ -0.98
SMC6-201ENST00000351948 NIPBLQ6KC79 2804 aaeCLIP8.93□□□□□ -0.983e-6■□□□□ 9.9
SMC6-201ENST00000351948 DMDP11532 3685 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
SMC6-201ENST00000351948 TRAV7A0A075B6U4 112 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 Q6ZQT0 140 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 Q8NBF4 154 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
SMC6-201ENST00000351948 STAB2Q8WWQ8 2551 aa8.91□□□□□ -0.98
SMC6-201ENST00000351948 SMIM29Q86T20 159 aa8.9□□□□□ -0.98
SMC6-201ENST00000351948 TNP2Q05952 138 aa8.9□□□□□ -0.99
SMC6-201ENST00000351948 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.99
SMC6-201ENST00000351948 NF1P21359 2839 aa8.89□□□□□ -0.99
SMC6-201ENST00000351948 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
SMC6-201ENST00000351948 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
SMC6-201ENST00000351948 IGKV2-30P06310 120 aa8.89□□□□□ -0.99
SMC6-201ENST00000351948 H0Y9P7 68 aa8.89□□□□□ -0.99
SMC6-201ENST00000351948 SPINK1P00995 79 aa8.88□□□□□ -0.99
SMC6-201ENST00000351948 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
SMC6-201ENST00000351948 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
SMC6-201ENST00000351948 NDUFC1O43677 76 aa8.85□□□□□ -0.99
SMC6-201ENST00000351948 CXCL6P80162 114 aa8.85□□□□□ -0.99
SMC6-201ENST00000351948 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
SMC6-201ENST00000351948 FBN2P35556 2912 aa8.84□□□□□ -0.99
SMC6-201ENST00000351948 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
SMC6-201ENST00000351948 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
SMC6-201ENST00000351948 hDV103S1A0JD37 113 aa8.83□□□□□ -1
SMC6-201ENST00000351948 TMEM254Q8TBM7 123 aa8.83□□□□□ -1
SMC6-201ENST00000351948 SPTSSBQ8NFR3 76 aa8.83□□□□□ -1
SMC6-201ENST00000351948 ZNF861PO60384 105 aa8.82□□□□□ -1
SMC6-201ENST00000351948 LOC110117498A0A087WWA1 95 aa8.82□□□□□ -1
SMC6-201ENST00000351948 TLX1NBP0CAT3 122 aa8.82□□□□□ -1
SMC6-201ENST00000351948 Q8N377 158 aa8.82□□□□□ -1
SMC6-201ENST00000351948 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
SMC6-201ENST00000351948 IGFL1Q6UW32 110 aa8.8□□□□□ -1
SMC6-201ENST00000351948 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
SMC6-201ENST00000351948 J3QL48 77 aa8.79□□□□□ -1
SMC6-201ENST00000351948 TRBV7-7A0A0K0K1E9 115 aa8.79□□□□□ -1
SMC6-201ENST00000351948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
SMC6-201ENST00000351948 LINC00313P59037 77 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms