RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 TENM3Q9P273 2699 aa14.39□□□□□ -0.11
NKX2-4-201ENST00000351817 KCNQ1DNQ9H478 68 aa14.38□□□□□ -0.11
NKX2-4-201ENST00000351817 COL6A5A8TX70 2615 aa14.35□□□□□ -0.11
NKX2-4-201ENST00000351817 TLX1NBP0CAT3 122 aa14.35□□□□□ -0.11
NKX2-4-201ENST00000351817 SERTAD4-AS1Q5TG53 156 aa14.34□□□□□ -0.11
NKX2-4-201ENST00000351817 C7orf33Q8WU49 177 aa14.34□□□□□ -0.11
NKX2-4-201ENST00000351817 PRB2P02812 416 aaPredicted RBP14.33□□□□□ -0.12
NKX2-4-201ENST00000351817 PLA2G2DQ9UNK4 145 aa14.33□□□□□ -0.12
NKX2-4-201ENST00000351817 TRAV7A0A075B6U4 112 aa14.32□□□□□ -0.12
NKX2-4-201ENST00000351817 FAM19A5Q7Z5A7 132 aaPredicted RBP14.32□□□□□ -0.12
NKX2-4-201ENST00000351817 TRAV10A0A0B4J240 114 aa14.31□□□□□ -0.12
NKX2-4-201ENST00000351817 NOTCH1P46531 2555 aa14.3□□□□□ -0.12
NKX2-4-201ENST00000351817 MRAPQ8TCY5 172 aa14.3□□□□□ -0.12
NKX2-4-201ENST00000351817 LINC00588Q9Y4M8 146 aa14.29□□□□□ -0.12
NKX2-4-201ENST00000351817 LOC107984640A0A0U1RRK4 108 aa14.29□□□□□ -0.12
NKX2-4-201ENST00000351817 C20orf197Q8N268 126 aa14.28□□□□□ -0.12
NKX2-4-201ENST00000351817 SCXQ7RTU7 201 aa14.27□□□□□ -0.12
NKX2-4-201ENST00000351817 DPH3Q96FX2 82 aa14.27□□□□□ -0.13
NKX2-4-201ENST00000351817 IGLV5-37A0A075B6J1 123 aa14.26□□□□□ -0.13
NKX2-4-201ENST00000351817 Q8N377 158 aa14.25□□□□□ -0.13
NKX2-4-201ENST00000351817 DHRS4-AS1Q9P1J3 65 aa14.25□□□□□ -0.13
NKX2-4-201ENST00000351817 K7EIL1 84 aa14.24□□□□□ -0.13
NKX2-4-201ENST00000351817 PRYO14603 147 aa14.24□□□□□ -0.13
NKX2-4-201ENST00000351817 DEFB105AQ8NG35 78 aa14.24□□□□□ -0.13
NKX2-4-201ENST00000351817 RMI2Q96E14 147 aa14.24□□□□□ -0.13
NKX2-4-201ENST00000351817 CASC10Q5T4H9 136 aa14.23□□□□□ -0.13
NKX2-4-201ENST00000351817 Q6ZRX8 168 aa14.23□□□□□ -0.13
NKX2-4-201ENST00000351817 TM2D3Q9BRN9 247 aa14.22□□□□□ -0.13
NKX2-4-201ENST00000351817 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
NKX2-4-201ENST00000351817 RPL37AP8A6NKH3 93 aa14.21□□□□□ -0.13
NKX2-4-201ENST00000351817 KRTAP4-16G5E9R7 235 aaPredicted RBP14.21□□□□□ -0.13
NKX2-4-201ENST00000351817 IGLV5-48A0A075B6I7 105 aa14.21□□□□□ -0.14
NKX2-4-201ENST00000351817 FAM168BA1KXE4 195 aa14.21□□□□□ -0.14
NKX2-4-201ENST00000351817 NBEAL1Q6ZS30 2694 aa14.21□□□□□ -0.14
NKX2-4-201ENST00000351817 SPRR1AP35321 89 aa14.2□□□□□ -0.14
NKX2-4-201ENST00000351817 NREPQ16612 68 aa14.2□□□□□ -0.14
NKX2-4-201ENST00000351817 ETDCA0A1B0GVM5 59 aa14.19□□□□□ -0.14
NKX2-4-201ENST00000351817 HUWE1Q7Z6Z7 4374 aaKnown RBP14.18□□□□□ -0.14
NKX2-4-201ENST00000351817 Q9BRP9 147 aa14.18□□□□□ -0.14
NKX2-4-201ENST00000351817 KLKP1Q107X0 134 aa14.16□□□□□ -0.14
NKX2-4-201ENST00000351817 KRTAP7-1Q8IUC3 87 aa14.15□□□□□ -0.14
NKX2-4-201ENST00000351817 C3orf84H3BNL1 204 aa14.14□□□□□ -0.15
NKX2-4-201ENST00000351817 A0A1B0GW54 56 aa14.13□□□□□ -0.15
NKX2-4-201ENST00000351817 MRPL55Q7Z7F7 128 aaKnown RBP14.13□□□□□ -0.15
NKX2-4-201ENST00000351817 IGKV4-1P06312 121 aa14.13□□□□□ -0.15
NKX2-4-201ENST00000351817 H7BZZ5 65 aa14.12□□□□□ -0.15
NKX2-4-201ENST00000351817 BPY2O14599 106 aa14.11□□□□□ -0.15
NKX2-4-201ENST00000351817 FUSP35637 526 aaKnown RBP eCLIP14.11□□□□□ -0.15
NKX2-4-201ENST00000351817 FAM236DA0A1B0GTK5 79 aa14.1□□□□□ -0.15
NKX2-4-201ENST00000351817 FAM236CP0DP71 79 aa14.1□□□□□ -0.15
NKX2-4-201ENST00000351817 TNP2Q05952 138 aa14.1□□□□□ -0.15
NKX2-4-201ENST00000351817 Q8N9L7 120 aa14.1□□□□□ -0.15
NKX2-4-201ENST00000351817 ST20-AS1Q8NBB2 130 aa14.09□□□□□ -0.15
NKX2-4-201ENST00000351817 OXTP01178 125 aa14.09□□□□□ -0.15
NKX2-4-201ENST00000351817 SNURFQ9Y675 71 aa14.08□□□□□ -0.16
NKX2-4-201ENST00000351817 C1orf137Q5JT78 98 aa14.07□□□□□ -0.16
NKX2-4-201ENST00000351817 MDFIQ99750 246 aa14.07□□□□□ -0.16
NKX2-4-201ENST00000351817 A0A1W2PNM2 257 aa14.07□□□□□ -0.16
NKX2-4-201ENST00000351817 MGAM2Q2M2H8 2515 aa14.07□□□□□ -0.16
NKX2-4-201ENST00000351817 UBE2BP63146 152 aa14.05□□□□□ -0.16
NKX2-4-201ENST00000351817 ERC2-IT1O76042 136 aa14.04□□□□□ -0.16
NKX2-4-201ENST00000351817 REG3GQ6UW15 175 aa14.04□□□□□ -0.16
NKX2-4-201ENST00000351817 Q8NBF4 154 aa14.03□□□□□ -0.16
NKX2-4-201ENST00000351817 NDUFC1O43677 76 aa14.02□□□□□ -0.17
NKX2-4-201ENST00000351817 F8WEM9 126 aa14□□□□□ -0.17
NKX2-4-201ENST00000351817 SPRR4Q96PI1 79 aa14□□□□□ -0.17
NKX2-4-201ENST00000351817 DNAH1Q9P2D7 4330 aa14□□□□□ -0.17
NKX2-4-201ENST00000351817 OCR1Q9BZK8 76 aa13.98□□□□□ -0.17
NKX2-4-201ENST00000351817 TMEM254Q8TBM7 123 aa13.98□□□□□ -0.17
NKX2-4-201ENST00000351817 SERP1Q9Y6X1 66 aa13.97□□□□□ -0.17
NKX2-4-201ENST00000351817 Q5XG85 94 aa13.96□□□□□ -0.17
NKX2-4-201ENST00000351817 C16orf90A8MZG2 172 aa13.95□□□□□ -0.18
NKX2-4-201ENST00000351817 DNAH9Q9NYC9 4486 aa13.94□□□□□ -0.18
NKX2-4-201ENST00000351817 A0A096LNI7 61 aa13.94□□□□□ -0.18
NKX2-4-201ENST00000351817 CNBPP62633 177 aaKnown RBP13.94□□□□□ -0.18
NKX2-4-201ENST00000351817 SMIM29Q86T20 159 aa13.94□□□□□ -0.18
NKX2-4-201ENST00000351817 EPM2AB3EWF7 344 aa13.94□□□□□ -0.18
NKX2-4-201ENST00000351817 COL7A1Q02388 2944 aa13.93□□□□□ -0.18
NKX2-4-201ENST00000351817 KRTAP1-5Q9BYS1 174 aa13.93□□□□□ -0.18
NKX2-4-201ENST00000351817 IGKV2-24A0A0C4DH68 120 aa13.9□□□□□ -0.18
NKX2-4-201ENST00000351817 PSCAO43653 123 aa13.9□□□□□ -0.18
NKX2-4-201ENST00000351817 LINC00476Q8WZB0 136 aa13.9□□□□□ -0.18
NKX2-4-201ENST00000351817 C4orf26Q17RF5 130 aa13.9□□□□□ -0.18
NKX2-4-201ENST00000351817 ATP5EP56381 51 aaPredicted RBP13.89□□□□□ -0.19
NKX2-4-201ENST00000351817 A0A1W2PNN7 141 aa13.88□□□□□ -0.19
NKX2-4-201ENST00000351817 PRO0628Q9UI54 55 aa13.88□□□□□ -0.19
NKX2-4-201ENST00000351817 A0A0U1RQV1 116 aa13.87□□□□□ -0.19
NKX2-4-201ENST00000351817 HRCT1Q6UXD1 115 aa13.87□□□□□ -0.19
NKX2-4-201ENST00000351817 DSCR10P59022 87 aa13.86□□□□□ -0.19
NKX2-4-201ENST00000351817 PRLHP81277 87 aa13.86□□□□□ -0.19
NKX2-4-201ENST00000351817 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
NKX2-4-201ENST00000351817 STAB2Q8WWQ8 2551 aa13.85□□□□□ -0.19
NKX2-4-201ENST00000351817 C14orf177Q52M58 125 aa13.84□□□□□ -0.19
NKX2-4-201ENST00000351817 B9D2Q9BPU9 175 aa13.84□□□□□ -0.19
NKX2-4-201ENST00000351817 IGFL1Q6UW32 110 aa13.83□□□□□ -0.2
NKX2-4-201ENST00000351817 IGLV8-61A0A075B6I0 122 aa13.82□□□□□ -0.2
NKX2-4-201ENST00000351817 APLNQ9ULZ1 77 aa13.82□□□□□ -0.2
NKX2-4-201ENST00000351817 HIGD2AQ9BW72 106 aa13.81□□□□□ -0.2
NKX2-4-201ENST00000351817 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
NKX2-4-201ENST00000351817 LYSTQ99698 3801 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms