RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
SMAD9-201ENST00000350148 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
SMAD9-201ENST00000350148 A0A1B0GU69 56 aa8.2□□□□□ -1.1
SMAD9-201ENST00000350148 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
SMAD9-201ENST00000350148 C22orf24Q9Y442 160 aa8.19□□□□□ -1.1
SMAD9-201ENST00000350148 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
SMAD9-201ENST00000350148 DMDP11532 3685 aa8.18□□□□□ -1.1
SMAD9-201ENST00000350148 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
SMAD9-201ENST00000350148 HELZ2Q9BYK8 2649 aaKnown RBP8.17□□□□□ -1.1
SMAD9-201ENST00000350148 MGAQ8IWI9 3026 aa8.17□□□□□ -1.1
SMAD9-201ENST00000350148 WWC2-AS2Q96NR7 200 aa8.17□□□□□ -1.1
SMAD9-201ENST00000350148 PRR15Q8IV56 129 aa8.17□□□□□ -1.1
SMAD9-201ENST00000350148 A0A1B0GW54 56 aa8.16□□□□□ -1.1
SMAD9-201ENST00000350148 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
SMAD9-201ENST00000350148 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
SMAD9-201ENST00000350148 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
SMAD9-201ENST00000350148 KIAA0087Q14695 138 aa8.15□□□□□ -1.11
SMAD9-201ENST00000350148 ITPR3Q14573 2671 aa8.15□□□□□ -1.11
SMAD9-201ENST00000350148 ELOF1P60002 83 aaKnown RBP8.14□□□□□ -1.11
SMAD9-201ENST00000350148 C1orf137Q5JT78 98 aa8.14□□□□□ -1.11
SMAD9-201ENST00000350148 RBM12B-AS1Q9P1G2 102 aa8.14□□□□□ -1.11
SMAD9-201ENST00000350148 IGSF10Q6WRI0 2623 aa8.13□□□□□ -1.11
SMAD9-201ENST00000350148 LINC00167Q96N53 147 aa8.12□□□□□ -1.11
SMAD9-201ENST00000350148 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
SMAD9-201ENST00000350148 IGLV6-57P01721 117 aa8.12□□□□□ -1.11
SMAD9-201ENST00000350148 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
SMAD9-201ENST00000350148 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.11
SMAD9-201ENST00000350148 SMG1Q96Q15 3661 aaKnown RBP8.09□□□□□ -1.11
SMAD9-201ENST00000350148 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 C15orf56Q8N910 161 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 Q9BRP9 147 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 TRAV22A0A0B4J277 110 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 APLNQ9ULZ1 77 aa8.08□□□□□ -1.12
SMAD9-201ENST00000350148 Q6ZRX8 168 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 SPINK1P00995 79 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 KLKP1Q107X0 134 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
SMAD9-201ENST00000350148 Q6ZRP5 223 aa8.06□□□□□ -1.12
SMAD9-201ENST00000350148 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
SMAD9-201ENST00000350148 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
SMAD9-201ENST00000350148 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
SMAD9-201ENST00000350148 RTL8CO15255 209 aa8.05□□□□□ -1.12
SMAD9-201ENST00000350148 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
SMAD9-201ENST00000350148 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
SMAD9-201ENST00000350148 H7BZZ5 65 aa8.04□□□□□ -1.12
SMAD9-201ENST00000350148 H3BPC8 53 aa8.04□□□□□ -1.12
SMAD9-201ENST00000350148 IGLV9-49A0A0B4J1Y8 123 aa8.04□□□□□ -1.12
SMAD9-201ENST00000350148 ACYP2P14621 99 aa8.03□□□□□ -1.12
SMAD9-201ENST00000350148 CYSTM1Q9H1C7 97 aa8.03□□□□□ -1.12
SMAD9-201ENST00000350148 CFAP47Q6ZTR5 3102 aa8.03□□□□□ -1.12
SMAD9-201ENST00000350148 FLNBO75369 2602 aaKnown RBP8.03□□□□□ -1.12
SMAD9-201ENST00000350148 FAM104AQ969W3 186 aa8.03□□□□□ -1.12
SMAD9-201ENST00000350148 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
SMAD9-201ENST00000350148 PRLHP81277 87 aa8.01□□□□□ -1.13
SMAD9-201ENST00000350148 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
SMAD9-201ENST00000350148 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
SMAD9-201ENST00000350148 KALRNO60229 2985 aa8□□□□□ -1.13
SMAD9-201ENST00000350148 LOC400499M0QZD8 3231 aa8□□□□□ -1.13
SMAD9-201ENST00000350148 A0A087WSZ3 146 aa7.99□□□□□ -1.13
SMAD9-201ENST00000350148 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
SMAD9-201ENST00000350148 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
SMAD9-201ENST00000350148 Q6ZQT0 140 aa7.97□□□□□ -1.13
SMAD9-201ENST00000350148 COA5Q86WW8 74 aa7.97□□□□□ -1.13
SMAD9-201ENST00000350148 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
SMAD9-201ENST00000350148 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
SMAD9-201ENST00000350148 PHF5AQ7RTV0 110 aaKnown RBP7.96□□□□□ -1.13
SMAD9-201ENST00000350148 UNC79Q9P2D8 2635 aa7.96□□□□□ -1.13
SMAD9-201ENST00000350148 SPENQ96T58 3664 aaKnown RBP7.96□□□□□ -1.14
SMAD9-201ENST00000350148 UQCR11O14957 56 aa7.96□□□□□ -1.14
SMAD9-201ENST00000350148 Q5XG85 94 aa7.95□□□□□ -1.14
SMAD9-201ENST00000350148 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
SMAD9-201ENST00000350148 ZZEF1O43149 2961 aa7.95□□□□□ -1.14
SMAD9-201ENST00000350148 A0A087WTM6 91 aa7.95□□□□□ -1.14
SMAD9-201ENST00000350148 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
SMAD9-201ENST00000350148 Q8NBF4 154 aa7.94□□□□□ -1.14
SMAD9-201ENST00000350148 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
SMAD9-201ENST00000350148 TACC2O95359 2948 aa7.94□□□□□ -1.14
SMAD9-201ENST00000350148 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
SMAD9-201ENST00000350148 DMXL2Q8TDJ6 3036 aa7.94□□□□□ -1.14
SMAD9-201ENST00000350148 LAMA5O15230 3695 aa7.93□□□□□ -1.14
SMAD9-201ENST00000350148 IGLV8-61A0A075B6I0 122 aa7.93□□□□□ -1.14
SMAD9-201ENST00000350148 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
SMAD9-201ENST00000350148 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
SMAD9-201ENST00000350148 TRBV7-4A0A0J9YYF1 115 aa7.9□□□□□ -1.14
SMAD9-201ENST00000350148 FAM168BA1KXE4 195 aa7.89□□□□□ -1.15
SMAD9-201ENST00000350148 LINC00476Q8WZB0 136 aa7.89□□□□□ -1.15
SMAD9-201ENST00000350148 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
SMAD9-201ENST00000350148 RPL37AP61513 92 aaKnown RBP7.88□□□□□ -1.15
SMAD9-201ENST00000350148 Q1T7F1 81 aa7.88□□□□□ -1.15
SMAD9-201ENST00000350148 SVEP1Q4LDE5 3571 aa7.88□□□□□ -1.15
SMAD9-201ENST00000350148 ADGRG4Q8IZF6 3080 aa7.87□□□□□ -1.15
SMAD9-201ENST00000350148 CENPEQ02224 2701 aa7.87□□□□□ -1.15
SMAD9-201ENST00000350148 OXTP01178 125 aa7.87□□□□□ -1.15
SMAD9-201ENST00000350148 ATRQ13535 2644 aa7.86□□□□□ -1.15
SMAD9-201ENST00000350148 LRBAP50851 2863 aa7.86□□□□□ -1.15
SMAD9-201ENST00000350148 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
SMAD9-201ENST00000350148 CASC10Q5T4H9 136 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms