RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RPL37AP8A6NKH3 93 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 RPS28P62857 69 aaKnown RBP11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 LINC01556Q5JQF7 62 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 SNURFQ9Y675 71 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 BAHCC1Q9P281 2608 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 H3BQ85 93 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 CXCL6P80162 114 aa11.8□□□□□ -0.52
PTP4A3-202ENST00000349124 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
PTP4A3-202ENST00000349124 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
PTP4A3-202ENST00000349124 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
PTP4A3-202ENST00000349124 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
PTP4A3-202ENST00000349124 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
PTP4A3-202ENST00000349124 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.52
PTP4A3-202ENST00000349124 C3orf84H3BNL1 204 aa11.77□□□□□ -0.53
PTP4A3-202ENST00000349124 NKAPP1Q8N9T2 125 aa11.76□□□□□ -0.53
PTP4A3-202ENST00000349124 RMI2Q96E14 147 aa11.76□□□□□ -0.53
PTP4A3-202ENST00000349124 Q8N377 158 aa11.75□□□□□ -0.53
PTP4A3-202ENST00000349124 NBEAL1Q6ZS30 2694 aa11.75□□□□□ -0.53
PTP4A3-202ENST00000349124 KCNQ1DNQ9H478 68 aa11.74□□□□□ -0.53
PTP4A3-202ENST00000349124 H7BZZ5 65 aa11.73□□□□□ -0.53
PTP4A3-202ENST00000349124 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
PTP4A3-202ENST00000349124 KRTAP24-1Q3LI83 254 aa11.73□□□□□ -0.53
PTP4A3-202ENST00000349124 BPY2O14599 106 aa11.72□□□□□ -0.53
PTP4A3-202ENST00000349124 KRTAP7-1Q8IUC3 87 aa11.71□□□□□ -0.53
PTP4A3-202ENST00000349124 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.54
PTP4A3-202ENST00000349124 NREPQ16612 68 aa11.7□□□□□ -0.54
PTP4A3-202ENST00000349124 Q9BRP9 147 aa11.7□□□□□ -0.54
PTP4A3-202ENST00000349124 LINC00588Q9Y4M8 146 aa11.7□□□□□ -0.54
PTP4A3-202ENST00000349124 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
PTP4A3-202ENST00000349124 BCE1O60756 84 aa11.67□□□□□ -0.54
PTP4A3-202ENST00000349124 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
PTP4A3-202ENST00000349124 FAM236DA0A1B0GTK5 79 aa11.66□□□□□ -0.54
PTP4A3-202ENST00000349124 IGKV4-1P06312 121 aa11.66□□□□□ -0.54
PTP4A3-202ENST00000349124 FAM236CP0DP71 79 aa11.66□□□□□ -0.54
PTP4A3-202ENST00000349124 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
PTP4A3-202ENST00000349124 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
PTP4A3-202ENST00000349124 F8WEM9 126 aa11.65□□□□□ -0.54
PTP4A3-202ENST00000349124 ERC2-IT1O76042 136 aa11.65□□□□□ -0.54
PTP4A3-202ENST00000349124 MRAPQ8TCY5 172 aa11.65□□□□□ -0.54
PTP4A3-202ENST00000349124 DNAH3Q8TD57 4116 aa11.65□□□□□ -0.54
PTP4A3-202ENST00000349124 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
PTP4A3-202ENST00000349124 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
PTP4A3-202ENST00000349124 Q6ZRX8 168 aa11.64□□□□□ -0.55
PTP4A3-202ENST00000349124 IGLV1-50A0A075B6I6 118 aa11.64□□□□□ -0.55
PTP4A3-202ENST00000349124 CSMD3Q7Z407 3707 aa11.63□□□□□ -0.55
PTP4A3-202ENST00000349124 LYSTQ99698 3801 aa11.63□□□□□ -0.55
PTP4A3-202ENST00000349124 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
PTP4A3-202ENST00000349124 Q5XG85 94 aa11.63□□□□□ -0.55
PTP4A3-202ENST00000349124 IGLV5-48A0A075B6I7 105 aa11.62□□□□□ -0.55
PTP4A3-202ENST00000349124 HUWE1Q7Z6Z7 4374 aaKnown RBP11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 A0A0G2JQZ4 141 aa11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 ETDCA0A1B0GVM5 59 aa11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 A0A1W2PNN7 141 aa11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 F8WDY8 70 aa11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
PTP4A3-202ENST00000349124 HRCT1Q6UXD1 115 aa11.58□□□□□ -0.56
PTP4A3-202ENST00000349124 DHRS4-AS1Q9P1J3 65 aa11.58□□□□□ -0.56
PTP4A3-202ENST00000349124 MGAM2Q2M2H8 2515 aa11.58□□□□□ -0.56
PTP4A3-202ENST00000349124 SRRM2Q9UQ35 2752 aaKnown RBP11.57□□□□□ -0.56
PTP4A3-202ENST00000349124 SPRR1AP35321 89 aa11.57□□□□□ -0.56
PTP4A3-202ENST00000349124 C1orf137Q5JT78 98 aa11.57□□□□□ -0.56
PTP4A3-202ENST00000349124 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
PTP4A3-202ENST00000349124 TMEM254Q8TBM7 123 aa11.56□□□□□ -0.56
PTP4A3-202ENST00000349124 MRPL55Q7Z7F7 128 aaKnown RBP11.56□□□□□ -0.56
PTP4A3-202ENST00000349124 UBE2BP63146 152 aa11.55□□□□□ -0.56
PTP4A3-202ENST00000349124 TNP2Q05952 138 aa11.55□□□□□ -0.56
PTP4A3-202ENST00000349124 PRYO14603 147 aa11.54□□□□□ -0.56
PTP4A3-202ENST00000349124 OCR1Q9BZK8 76 aa11.54□□□□□ -0.56
PTP4A3-202ENST00000349124 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
PTP4A3-202ENST00000349124 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.569e-7■■■□□ 16.4
PTP4A3-202ENST00000349124 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
PTP4A3-202ENST00000349124 TENM2Q9NT68 2774 aa11.52□□□□□ -0.56
PTP4A3-202ENST00000349124 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
PTP4A3-202ENST00000349124 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
PTP4A3-202ENST00000349124 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
PTP4A3-202ENST00000349124 EPM2AB3EWF7 344 aa11.5□□□□□ -0.57
PTP4A3-202ENST00000349124 SMIM29Q86T20 159 aa11.5□□□□□ -0.57
PTP4A3-202ENST00000349124 HIGD2AQ9BW72 106 aa11.5□□□□□ -0.57
PTP4A3-202ENST00000349124 Q8NBF4 154 aa11.49□□□□□ -0.57
PTP4A3-202ENST00000349124 DNAH9Q9NYC9 4486 aa11.49□□□□□ -0.57
PTP4A3-202ENST00000349124 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
PTP4A3-202ENST00000349124 COL7A1Q02388 2944 aa11.47□□□□□ -0.57
PTP4A3-202ENST00000349124 PRLHP81277 87 aa11.47□□□□□ -0.57
PTP4A3-202ENST00000349124 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
PTP4A3-202ENST00000349124 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
PTP4A3-202ENST00000349124 K7EIL1 84 aa11.46□□□□□ -0.57
PTP4A3-202ENST00000349124 DSCR10P59022 87 aa11.46□□□□□ -0.58
PTP4A3-202ENST00000349124 LINC00474Q9P2X8 69 aa11.46□□□□□ -0.58
PTP4A3-202ENST00000349124 A0A096LNI7 61 aa11.45□□□□□ -0.58
PTP4A3-202ENST00000349124 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
PTP4A3-202ENST00000349124 K7EQZ3 153 aa11.44□□□□□ -0.58
PTP4A3-202ENST00000349124 LINC00476Q8WZB0 136 aa11.44□□□□□ -0.58
PTP4A3-202ENST00000349124 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
PTP4A3-202ENST00000349124 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
PTP4A3-202ENST00000349124 NDUFC1O43677 76 aa11.43□□□□□ -0.58
PTP4A3-202ENST00000349124 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
PTP4A3-202ENST00000349124 KRTAP11-1Q8IUC1 163 aa11.4□□□□□ -0.58
PTP4A3-202ENST00000349124 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
PTP4A3-202ENST00000349124 IGFL1Q6UW32 110 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms