RNA–Protein interactions for RNA: ENST00000347037.9

SYNE1-202, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 3,798 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-202ENST00000347037 FASNP49327 2511 aaKnown RBP7.3□□□□□ -1.24
SYNE1-202ENST00000347037 HIVEP1P15822 2718 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 KPRPQ5T749 579 aaPredicted RBP7.3□□□□□ -1.24
SYNE1-202ENST00000347037 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 PRYO14603 147 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 HIGD2AQ9BW72 106 aa7.3□□□□□ -1.24
SYNE1-202ENST00000347037 PRO0628Q9UI54 55 aa7.29□□□□□ -1.24
SYNE1-202ENST00000347037 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SYNE1-202ENST00000347037 TENM1Q9UKZ4 2725 aa7.29□□□□□ -1.24
SYNE1-202ENST00000347037 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
SYNE1-202ENST00000347037 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYNE1-202ENST00000347037 RETNQ9HD89 108 aa7.28□□□□□ -1.24
SYNE1-202ENST00000347037 ATRQ13535 2644 aa7.28□□□□□ -1.24
SYNE1-202ENST00000347037 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
SYNE1-202ENST00000347037 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
SYNE1-202ENST00000347037 BRK1Q8WUW1 75 aa7.28□□□□□ -1.24
SYNE1-202ENST00000347037 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
SYNE1-202ENST00000347037 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.25
SYNE1-202ENST00000347037 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.25
SYNE1-202ENST00000347037 Q8N377 158 aa7.26□□□□□ -1.25
SYNE1-202ENST00000347037 SERTAD4-AS1Q5TG53 156 aa7.26□□□□□ -1.25
SYNE1-202ENST00000347037 SMIM29Q86T20 159 aa7.26□□□□□ -1.25
SYNE1-202ENST00000347037 HECTD1Q9ULT8 2610 aa7.26□□□□□ -1.25
SYNE1-202ENST00000347037 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
SYNE1-202ENST00000347037 A0A0U1RQV1 116 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 Q6ZTC4 211 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 PKD1L1Q8TDX9 2849 aa7.25□□□□□ -1.25
SYNE1-202ENST00000347037 ANK2Q01484 3957 aa7.24□□□□□ -1.25
SYNE1-202ENST00000347037 NSD1Q96L73 2696 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-202ENST00000347037 ESRGQ1W209 222 aa7.24□□□□□ -1.25
SYNE1-202ENST00000347037 TEP1Q99973 2627 aaKnown RBP7.24□□□□□ -1.25
SYNE1-202ENST00000347037 LRCOL1A6NCL2 159 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 C1orf137Q5JT78 98 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 KCNQ1DNQ9H478 68 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
SYNE1-202ENST00000347037 FAM168BA1KXE4 195 aa7.21□□□□□ -1.25
SYNE1-202ENST00000347037 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
SYNE1-202ENST00000347037 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
SYNE1-202ENST00000347037 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
SYNE1-202ENST00000347037 F8P00451 2351 aa7.19□□□□□ -1.26
SYNE1-202ENST00000347037 Q6ZRX8 168 aa7.19□□□□□ -1.26
SYNE1-202ENST00000347037 Q9BRP9 147 aa7.19□□□□□ -1.26
SYNE1-202ENST00000347037 UBE2BP63146 152 aa7.18□□□□□ -1.26
SYNE1-202ENST00000347037 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-202ENST00000347037 PRR4Q16378 134 aa7.17□□□□□ -1.26
SYNE1-202ENST00000347037 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
SYNE1-202ENST00000347037 K7EQZ3 153 aa7.17□□□□□ -1.26
SYNE1-202ENST00000347037 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 A0A1W2PNN7 141 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 Q8NBF4 154 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 LINC01556Q5JQF7 62 aa7.16□□□□□ -1.26
SYNE1-202ENST00000347037 H3BNG1 76 aa7.15□□□□□ -1.26
SYNE1-202ENST00000347037 IGLV1-50A0A075B6I6 118 aa7.14□□□□□ -1.27
SYNE1-202ENST00000347037 DSCR10P59022 87 aa7.14□□□□□ -1.27
SYNE1-202ENST00000347037 CASC10Q5T4H9 136 aa7.14□□□□□ -1.27
SYNE1-202ENST00000347037 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
SYNE1-202ENST00000347037 BAHCC1Q9P281 2608 aa7.13□□□□□ -1.27
SYNE1-202ENST00000347037 FBN1P35555 2871 aaKnown RBP7.13□□□□□ -1.27
SYNE1-202ENST00000347037 F8WDY8 70 aa7.12□□□□□ -1.27
SYNE1-202ENST00000347037 TNP2Q05952 138 aa7.12□□□□□ -1.27
SYNE1-202ENST00000347037 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
SYNE1-202ENST00000347037 C11orf45Q8TAV5 145 aa7.12□□□□□ -1.27
SYNE1-202ENST00000347037 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
SYNE1-202ENST00000347037 KRTAP4-16G5E9R7 235 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-202ENST00000347037 WFDC13Q8IUB5 93 aa7.11□□□□□ -1.27
SYNE1-202ENST00000347037 MRPL55Q7Z7F7 128 aaKnown RBP7.11□□□□□ -1.27
SYNE1-202ENST00000347037 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-202ENST00000347037 A0A1B0GW54 56 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 PSCAO43653 123 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 KRTAP10-11P60412 298 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
SYNE1-202ENST00000347037 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.27
SYNE1-202ENST00000347037 PSPHP1O15172 72 aa7.09□□□□□ -1.28
SYNE1-202ENST00000347037 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.28
SYNE1-202ENST00000347037 SPRR1AP35321 89 aa7.08□□□□□ -1.28
SYNE1-202ENST00000347037 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
SYNE1-202ENST00000347037 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
SYNE1-202ENST00000347037 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
SYNE1-202ENST00000347037 LCE6AA0A183 80 aa7.07□□□□□ -1.28
SYNE1-202ENST00000347037 PRLHP81277 87 aa7.07□□□□□ -1.28
SYNE1-202ENST00000347037 FLNBO75369 2602 aaKnown RBP7.06□□□□□ -1.28
SYNE1-202ENST00000347037 A0A087WSZ3 146 aa7.06□□□□□ -1.28
SYNE1-202ENST00000347037 RPL37AP61513 92 aaKnown RBP7.06□□□□□ -1.28
SYNE1-202ENST00000347037 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
SYNE1-202ENST00000347037 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
SYNE1-202ENST00000347037 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
SYNE1-202ENST00000347037 IGLV5-37A0A075B6J1 123 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms