RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
HMGN3-202ENST00000344726 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
HMGN3-202ENST00000344726 B5MCH6 92 aa8.35□□□□□ -1.07
HMGN3-202ENST00000344726 NDUFC2O95298 119 aa8.35□□□□□ -1.07
HMGN3-202ENST00000344726 LITAFQ99732 161 aa8.35□□□□□ -1.07
HMGN3-202ENST00000344726 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
HMGN3-202ENST00000344726 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
HMGN3-202ENST00000344726 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
HMGN3-202ENST00000344726 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
HMGN3-202ENST00000344726 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
HMGN3-202ENST00000344726 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
HMGN3-202ENST00000344726 MUC17Q685J3 4493 aa8.32□□□□□ -1.08
HMGN3-202ENST00000344726 Q9BRP9 147 aa8.32□□□□□ -1.08
HMGN3-202ENST00000344726 PPDPFQ9H3Y8 114 aa8.32□□□□□ -1.08
HMGN3-202ENST00000344726 ZNF706Q9Y5V0 76 aaPredicted RBP8.32□□□□□ -1.08
HMGN3-202ENST00000344726 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
HMGN3-202ENST00000344726 KRTDAPP60985 99 aa8.31□□□□□ -1.08
HMGN3-202ENST00000344726 ZNF815PA8K554 130 aa8.3□□□□□ -1.08
HMGN3-202ENST00000344726 S100A12P80511 92 aa8.3□□□□□ -1.08
HMGN3-202ENST00000344726 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
HMGN3-202ENST00000344726 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
HMGN3-202ENST00000344726 LINC00308Q8TCZ7 52 aa8.3□□□□□ -1.08
HMGN3-202ENST00000344726 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 TIMM17BO60830 172 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 Q6ZRX8 168 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 KRTAP4-12Q9BQ66 201 aa8.29□□□□□ -1.08
HMGN3-202ENST00000344726 GAGE2AQ6NT46 116 aa8.28□□□□□ -1.08
HMGN3-202ENST00000344726 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
HMGN3-202ENST00000344726 ZNF73O43830 326 aaPredicted RBP8.26□□□□□ -1.09
HMGN3-202ENST00000344726 CTAG1AP78358 180 aa8.26□□□□□ -1.09
HMGN3-202ENST00000344726 ATOH7Q8N100 152 aa8.26□□□□□ -1.09
HMGN3-202ENST00000344726 Q8NBF4 154 aa8.26□□□□□ -1.09
HMGN3-202ENST00000344726 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
HMGN3-202ENST00000344726 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
HMGN3-202ENST00000344726 C20orf202A1L168 122 aa8.23□□□□□ -1.09
HMGN3-202ENST00000344726 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
HMGN3-202ENST00000344726 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
HMGN3-202ENST00000344726 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
HMGN3-202ENST00000344726 MOBPQ13875 183 aa8.22□□□□□ -1.09
HMGN3-202ENST00000344726 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
HMGN3-202ENST00000344726 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
HMGN3-202ENST00000344726 OR13C6PQ8NH95 151 aa8.22□□□□□ -1.09
HMGN3-202ENST00000344726 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.1
HMGN3-202ENST00000344726 PCP2Q8IVA1 136 aa8.21□□□□□ -1.1
HMGN3-202ENST00000344726 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
HMGN3-202ENST00000344726 TPRXLQ17RH7 258 aa8.2□□□□□ -1.1
HMGN3-202ENST00000344726 SCGB1D4Q6XE38 83 aa8.2□□□□□ -1.1
HMGN3-202ENST00000344726 HIST3H2BBQ8N257 126 aa8.2□□□□□ -1.1
HMGN3-202ENST00000344726 HIST1H2BLQ99880 126 aa8.18□□□□□ -1.1
HMGN3-202ENST00000344726 CBY1Q9Y3M2 126 aa8.18□□□□□ -1.1
HMGN3-202ENST00000344726 SPINK1P00995 79 aa8.17□□□□□ -1.1
HMGN3-202ENST00000344726 S100A1P23297 94 aa8.17□□□□□ -1.1
HMGN3-202ENST00000344726 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
HMGN3-202ENST00000344726 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
HMGN3-202ENST00000344726 LINC00518Q8N0U6 118 aa8.17□□□□□ -1.1
HMGN3-202ENST00000344726 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
HMGN3-202ENST00000344726 C6orf99Q4VX62 202 aa8.15□□□□□ -1.1
HMGN3-202ENST00000344726 MUSTN1Q8IVN3 82 aa8.15□□□□□ -1.1
HMGN3-202ENST00000344726 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
HMGN3-202ENST00000344726 IFITM1P13164 125 aa8.14□□□□□ -1.11
HMGN3-202ENST00000344726 AKR1D1P51857 326 aa8.14□□□□□ -1.11
HMGN3-202ENST00000344726 FP248Q71RG6 208 aaPredicted RBP8.14□□□□□ -1.11
HMGN3-202ENST00000344726 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
HMGN3-202ENST00000344726 DHRS4-AS1Q9P1J3 65 aa8.14□□□□□ -1.11
HMGN3-202ENST00000344726 SPRR1BP22528 89 aa8.13□□□□□ -1.11
HMGN3-202ENST00000344726 COX7BP24311 80 aa8.13□□□□□ -1.11
HMGN3-202ENST00000344726 S100A2P29034 98 aa8.13□□□□□ -1.11
HMGN3-202ENST00000344726 C9orf153Q5TBE3 101 aa8.13□□□□□ -1.11
HMGN3-202ENST00000344726 Q6ZVH6 145 aa8.13□□□□□ -1.11
HMGN3-202ENST00000344726 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
HMGN3-202ENST00000344726 Q8N377 158 aa8.12□□□□□ -1.11
HMGN3-202ENST00000344726 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
HMGN3-202ENST00000344726 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
HMGN3-202ENST00000344726 A6NDN8 102 aa8.1□□□□□ -1.11
HMGN3-202ENST00000344726 KRTAP19-4Q3LI73 84 aa8.1□□□□□ -1.11
HMGN3-202ENST00000344726 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
HMGN3-202ENST00000344726 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
HMGN3-202ENST00000344726 S100A6P06703 90 aa8.09□□□□□ -1.11
HMGN3-202ENST00000344726 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
HMGN3-202ENST00000344726 SLC25A20O43772 301 aa8.06□□□□□ -1.12
HMGN3-202ENST00000344726 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
HMGN3-202ENST00000344726 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
HMGN3-202ENST00000344726 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
HMGN3-202ENST00000344726 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 Q1RN00 199 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 SLC25A34Q6PIV7 304 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 LAMTOR3Q9UHA4 124 aa8.05□□□□□ -1.12
HMGN3-202ENST00000344726 TAL2Q16559 108 aa8.04□□□□□ -1.12
HMGN3-202ENST00000344726 SMIM29Q86T20 159 aa8.04□□□□□ -1.12
HMGN3-202ENST00000344726 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
HMGN3-202ENST00000344726 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
HMGN3-202ENST00000344726 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
HMGN3-202ENST00000344726 A4D1N5 150 aa8.02□□□□□ -1.13
HMGN3-202ENST00000344726 SCGB1D1O95968 90 aa8.02□□□□□ -1.13
HMGN3-202ENST00000344726 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
HMGN3-202ENST00000344726 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms