RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CENPEQ02224 2701 aa6.31□□□□□ -1.4
HOXA1-201ENST00000343060 Q6ZRP5 223 aa6.3□□□□□ -1.4
HOXA1-201ENST00000343060 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
HOXA1-201ENST00000343060 SETD2Q9BYW2 2564 aaPredicted RBP6.3□□□□□ -1.4
HOXA1-201ENST00000343060 PRR15Q8IV56 129 aa6.3□□□□□ -1.4
HOXA1-201ENST00000343060 Q8NBF4 154 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 V9GYY9 64 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 UBR5O95071 2799 aaPredicted RBP6.29□□□□□ -1.4
HOXA1-201ENST00000343060 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 HTN3P15516 51 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
HOXA1-201ENST00000343060 ETDCA0A1B0GVM5 59 aa6.28□□□□□ -1.4
HOXA1-201ENST00000343060 C1orf64Q8NEQ6 169 aa6.28□□□□□ -1.4
HOXA1-201ENST00000343060 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
HOXA1-201ENST00000343060 DSCR10P59022 87 aa6.28□□□□□ -1.4
HOXA1-201ENST00000343060 WFDC10BQ8IUB3 73 aa6.28□□□□□ -1.4
HOXA1-201ENST00000343060 C7orf33Q8WU49 177 aa6.28□□□□□ -1.4
HOXA1-201ENST00000343060 H3BNG1 76 aa6.27□□□□□ -1.41
HOXA1-201ENST00000343060 Q6ZRX8 168 aa6.27□□□□□ -1.41
HOXA1-201ENST00000343060 PLA2G2DQ9UNK4 145 aa6.27□□□□□ -1.41
HOXA1-201ENST00000343060 PRB1P04280 392 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 SPRR1AP35321 89 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 SERTAD4-AS1Q5TG53 156 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 DEFB105AQ8NG35 78 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
HOXA1-201ENST00000343060 NKAPP1Q8N9T2 125 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 Q9BRP9 147 aa6.26□□□□□ -1.41
HOXA1-201ENST00000343060 ZNF462Q96JM2 2506 aa6.25□□□□□ -1.41
HOXA1-201ENST00000343060 IGLV5-37A0A075B6J1 123 aa6.25□□□□□ -1.41
HOXA1-201ENST00000343060 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.25□□□□□ -1.41
HOXA1-201ENST00000343060 CCDC168Q8NDH2 2452 aa6.24□□□□□ -1.41
HOXA1-201ENST00000343060 K7EQZ3 153 aa6.24□□□□□ -1.41
HOXA1-201ENST00000343060 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
HOXA1-201ENST00000343060 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
HOXA1-201ENST00000343060 KMT2BQ9UMN6 2715 aaPredicted RBP6.23□□□□□ -1.41
HOXA1-201ENST00000343060 SEC61GP60059 68 aa6.23□□□□□ -1.41
HOXA1-201ENST00000343060 HIVEP2P31629 2446 aa6.23□□□□□ -1.41
HOXA1-201ENST00000343060 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
HOXA1-201ENST00000343060 IGLV1-50A0A075B6I6 118 aa6.22□□□□□ -1.41
HOXA1-201ENST00000343060 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
HOXA1-201ENST00000343060 TRAV22A0A0B4J277 110 aa6.21□□□□□ -1.42
HOXA1-201ENST00000343060 NDUFB1O75438 58 aa6.21□□□□□ -1.42
HOXA1-201ENST00000343060 PSCAO43653 123 aa6.21□□□□□ -1.42
HOXA1-201ENST00000343060 LINC01556Q5JQF7 62 aa6.21□□□□□ -1.42
HOXA1-201ENST00000343060 MTORP42345 2549 aa6.2□□□□□ -1.42
HOXA1-201ENST00000343060 LRCOL1A6NCL2 159 aa6.2□□□□□ -1.42
HOXA1-201ENST00000343060 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
HOXA1-201ENST00000343060 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
HOXA1-201ENST00000343060 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
HOXA1-201ENST00000343060 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
HOXA1-201ENST00000343060 PSPHP1O15172 72 aa6.17□□□□□ -1.42
HOXA1-201ENST00000343060 LINC00476Q8WZB0 136 aa6.17□□□□□ -1.42
HOXA1-201ENST00000343060 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
HOXA1-201ENST00000343060 ACANP16112 2415 aa6.16□□□□□ -1.42
HOXA1-201ENST00000343060 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
HOXA1-201ENST00000343060 VWFP04275 2813 aa6.15□□□□□ -1.42
HOXA1-201ENST00000343060 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.42
HOXA1-201ENST00000343060 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
HOXA1-201ENST00000343060 H3BPC8 53 aa6.15□□□□□ -1.43
HOXA1-201ENST00000343060 MP68P56378 58 aa6.15□□□□□ -1.43
HOXA1-201ENST00000343060 USP24Q9UPU5 2620 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 Q5VV11 94 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 B9D2Q9BPU9 175 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 PDZD2O15018 2839 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 HIVEP1P15822 2718 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 A8MUN3 132 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 PRR4Q16378 134 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
HOXA1-201ENST00000343060 DNAH10OSP0CZ25 163 aa6.13□□□□□ -1.43
HOXA1-201ENST00000343060 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
HOXA1-201ENST00000343060 LINC00588Q9Y4M8 146 aa6.13□□□□□ -1.43
HOXA1-201ENST00000343060 UBE2BP63146 152 aa6.12□□□□□ -1.43
HOXA1-201ENST00000343060 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
HOXA1-201ENST00000343060 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
HOXA1-201ENST00000343060 BAHCC1Q9P281 2608 aa6.11□□□□□ -1.43
HOXA1-201ENST00000343060 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
HOXA1-201ENST00000343060 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
HOXA1-201ENST00000343060 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
HOXA1-201ENST00000343060 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
HOXA1-201ENST00000343060 RETNQ9HD89 108 aa6.09□□□□□ -1.43
HOXA1-201ENST00000343060 UNC79Q9P2D8 2635 aa6.08□□□□□ -1.44
HOXA1-201ENST00000343060 H0Y9P7 68 aa6.08□□□□□ -1.44
HOXA1-201ENST00000343060 UBE2AP49459 152 aa6.08□□□□□ -1.44
HOXA1-201ENST00000343060 C9orf163Q8N9P6 203 aa6.08□□□□□ -1.44
HOXA1-201ENST00000343060 A0A087WSZ3 146 aa6.08□□□□□ -1.44
HOXA1-201ENST00000343060 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
HOXA1-201ENST00000343060 A0A1W2PNN7 141 aa6.07□□□□□ -1.44
HOXA1-201ENST00000343060 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
HOXA1-201ENST00000343060 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
HOXA1-201ENST00000343060 CASC10Q5T4H9 136 aa6.07□□□□□ -1.44
HOXA1-201ENST00000343060 SMR3AQ99954 134 aa6.07□□□□□ -1.44
HOXA1-201ENST00000343060 A8MU10 97 aa6.06□□□□□ -1.44
HOXA1-201ENST00000343060 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
HOXA1-201ENST00000343060 DEFB131BA0A096LNP1 70 aa6.05□□□□□ -1.44
HOXA1-201ENST00000343060 CD164Q04900 197 aa6.05□□□□□ -1.44
HOXA1-201ENST00000343060 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
HOXA1-201ENST00000343060 A8MWP4 228 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms