RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
TPM3-208ENST00000341485 USP17L23D6RBM5 183 aa9.75□□□□□ -0.85
TPM3-208ENST00000341485 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
TPM3-208ENST00000341485 ATOX1O00244 68 aa9.74□□□□□ -0.85
TPM3-208ENST00000341485 ATP5EP2Q5VTU8 51 aa9.74□□□□□ -0.85
TPM3-208ENST00000341485 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
TPM3-208ENST00000341485 UBL5Q9BZL1 73 aa9.74□□□□□ -0.85
TPM3-208ENST00000341485 TLX1NBP0CAT3 122 aa9.73□□□□□ -0.85
TPM3-208ENST00000341485 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
TPM3-208ENST00000341485 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
TPM3-208ENST00000341485 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
TPM3-208ENST00000341485 UQCRQO14949 82 aa9.71□□□□□ -0.85
TPM3-208ENST00000341485 PDE6GP18545 87 aa9.71□□□□□ -0.85
TPM3-208ENST00000341485 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.85
TPM3-208ENST00000341485 TRBV7-4A0A0J9YYF1 115 aa9.71□□□□□ -0.86
TPM3-208ENST00000341485 GHRHP01286 108 aa9.71□□□□□ -0.86
TPM3-208ENST00000341485 COX7CP15954 63 aa9.7□□□□□ -0.86
TPM3-208ENST00000341485 PSCAO43653 123 aa9.7□□□□□ -0.86
TPM3-208ENST00000341485 FAM19A1Q7Z5A9 133 aa9.7□□□□□ -0.86
TPM3-208ENST00000341485 PLA2G2DQ9UNK4 145 aa9.7□□□□□ -0.86
TPM3-208ENST00000341485 NBDYA0A0U1RRE5 68 aa9.68□□□□□ -0.86
TPM3-208ENST00000341485 C9orf153Q5TBE3 101 aa9.68□□□□□ -0.86
TPM3-208ENST00000341485 FAM168BA1KXE4 195 aa9.68□□□□□ -0.86
TPM3-208ENST00000341485 WWC2-AS2Q96NR7 200 aa9.68□□□□□ -0.86
TPM3-208ENST00000341485 Q6ZVQ6 151 aa9.67□□□□□ -0.86
TPM3-208ENST00000341485 PLECQ15149 4684 aaKnown RBP9.67□□□□□ -0.86
TPM3-208ENST00000341485 IGLV5-37A0A075B6J1 123 aa9.66□□□□□ -0.86
TPM3-208ENST00000341485 DNAH7Q8WXX0 4024 aa9.66□□□□□ -0.86
TPM3-208ENST00000341485 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.86
TPM3-208ENST00000341485 STARD9Q9P2P6 4700 aa9.64□□□□□ -0.87
TPM3-208ENST00000341485 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
TPM3-208ENST00000341485 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
TPM3-208ENST00000341485 CSMD3Q7Z407 3707 aa9.64□□□□□ -0.87
TPM3-208ENST00000341485 IGLV1-50A0A075B6I6 118 aa9.63□□□□□ -0.87
TPM3-208ENST00000341485 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
TPM3-208ENST00000341485 KRTAP4-16G5E9R7 235 aaPredicted RBP9.62□□□□□ -0.87
TPM3-208ENST00000341485 PRYO14603 147 aa9.62□□□□□ -0.87
TPM3-208ENST00000341485 HAMPP81172 84 aa9.62□□□□□ -0.87
TPM3-208ENST00000341485 CRYGAP11844 174 aa9.62□□□□□ -0.87
TPM3-208ENST00000341485 SPRR1AP35321 89 aa9.61□□□□□ -0.87
TPM3-208ENST00000341485 Q8N377 158 aa9.61□□□□□ -0.87
TPM3-208ENST00000341485 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 Q6ZRX8 168 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 FBN3Q75N90 2809 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 LYSTQ99698 3801 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 FAM19A5Q7Z5A7 132 aaPredicted RBP9.6□□□□□ -0.87
TPM3-208ENST00000341485 DEFB105AQ8NG35 78 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 Q9BRP9 147 aa9.6□□□□□ -0.87
TPM3-208ENST00000341485 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
TPM3-208ENST00000341485 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
TPM3-208ENST00000341485 CXCL6P80162 114 aa9.59□□□□□ -0.87
TPM3-208ENST00000341485 ETDCA0A1B0GVM5 59 aa9.58□□□□□ -0.88
TPM3-208ENST00000341485 LY6G6CO95867 125 aa9.58□□□□□ -0.88
TPM3-208ENST00000341485 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
TPM3-208ENST00000341485 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
TPM3-208ENST00000341485 C3orf84H3BNL1 204 aa9.55□□□□□ -0.88
TPM3-208ENST00000341485 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
TPM3-208ENST00000341485 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
TPM3-208ENST00000341485 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.54□□□□□ -0.88
TPM3-208ENST00000341485 Q6ZRN7 208 aaPredicted RBP9.54□□□□□ -0.88
TPM3-208ENST00000341485 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
TPM3-208ENST00000341485 DNAH10Q8IVF4 4471 aa9.54□□□□□ -0.88
TPM3-208ENST00000341485 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
TPM3-208ENST00000341485 Q6ZR54 194 aa9.53□□□□□ -0.88
TPM3-208ENST00000341485 ERC2-IT1O76042 136 aa9.52□□□□□ -0.88
TPM3-208ENST00000341485 CNBPP62633 177 aaKnown RBP9.52□□□□□ -0.88
TPM3-208ENST00000341485 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.88
TPM3-208ENST00000341485 A0A096LNI7 61 aa9.52□□□□□ -0.89
TPM3-208ENST00000341485 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
TPM3-208ENST00000341485 SMIM20Q8N5G0 67 aa9.51□□□□□ -0.89
TPM3-208ENST00000341485 TNP2Q05952 138 aa9.51□□□□□ -0.89
TPM3-208ENST00000341485 REG3GQ6UW15 175 aa9.51□□□□□ -0.89
TPM3-208ENST00000341485 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
TPM3-208ENST00000341485 BCE1O60756 84 aa9.5□□□□□ -0.89
TPM3-208ENST00000341485 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
TPM3-208ENST00000341485 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
TPM3-208ENST00000341485 UBE2BP63146 152 aa9.49□□□□□ -0.89
TPM3-208ENST00000341485 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
TPM3-208ENST00000341485 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
TPM3-208ENST00000341485 NREPQ16612 68 aa9.48□□□□□ -0.89
TPM3-208ENST00000341485 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
TPM3-208ENST00000341485 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.89
TPM3-208ENST00000341485 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
TPM3-208ENST00000341485 A0A087WTM6 91 aa9.45□□□□□ -0.9
TPM3-208ENST00000341485 Q8N9L7 120 aa9.44□□□□□ -0.9
TPM3-208ENST00000341485 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
TPM3-208ENST00000341485 IGKV4-1P06312 121 aa9.44□□□□□ -0.9
TPM3-208ENST00000341485 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.9
TPM3-208ENST00000341485 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
TPM3-208ENST00000341485 TMEM258P61165 79 aa9.43□□□□□ -0.9
TPM3-208ENST00000341485 SMIM29Q86T20 159 aa9.43□□□□□ -0.9
TPM3-208ENST00000341485 C20orf197Q8N268 126 aa9.43□□□□□ -0.9
TPM3-208ENST00000341485 TGP01266 2768 aa9.42□□□□□ -0.9
TPM3-208ENST00000341485 Q8NBF4 154 aa9.42□□□□□ -0.9
TPM3-208ENST00000341485 A0A1B0GW54 56 aa9.41□□□□□ -0.9
TPM3-208ENST00000341485 BPY2O14599 106 aa9.41□□□□□ -0.9
TPM3-208ENST00000341485 PRLHP81277 87 aa9.41□□□□□ -0.9
TPM3-208ENST00000341485 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
TPM3-208ENST00000341485 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.9
TPM3-208ENST00000341485 SPRR4Q96PI1 79 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms