RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PRO3102Q9H379 93 aa8.78□□□□□ -1
USP47-202ENST00000339865 DNAH12Q6ZR08 3092 aa8.76□□□□□ -1.01
USP47-202ENST00000339865 Q6ZRP5 223 aa8.75□□□□□ -1.01
USP47-202ENST00000339865 DSCR10P59022 87 aa8.73□□□□□ -1.01
USP47-202ENST00000339865 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
USP47-202ENST00000339865 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
USP47-202ENST00000339865 LINC01546A6NGU7 62 aa8.71□□□□□ -1.01
USP47-202ENST00000339865 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
USP47-202ENST00000339865 FAM168BA1KXE4 195 aa8.7□□□□□ -1.02
USP47-202ENST00000339865 IGLV5-48A0A075B6I7 105 aa8.69□□□□□ -1.02
USP47-202ENST00000339865 H7BZZ5 65 aa8.68□□□□□ -1.02
USP47-202ENST00000339865 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
USP47-202ENST00000339865 LINC00315P59091 139 aa8.67□□□□□ -1.02
USP47-202ENST00000339865 HECTD1Q9ULT8 2610 aa8.67□□□□□ -1.02
USP47-202ENST00000339865 CDSNQ15517 529 aa8.67□□□□□ -1.02
USP47-202ENST00000339865 Q1T7F1 81 aa8.67□□□□□ -1.02
USP47-202ENST00000339865 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
USP47-202ENST00000339865 LINC00483Q53H64 154 aa8.66□□□□□ -1.02
USP47-202ENST00000339865 C5orf42Q9H799 3197 aa8.65□□□□□ -1.02
USP47-202ENST00000339865 EP400Q96L91 3159 aa8.65□□□□□ -1.02
USP47-202ENST00000339865 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.03
USP47-202ENST00000339865 A0A0A0MQY5 61 aa8.64□□□□□ -1.03
USP47-202ENST00000339865 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
USP47-202ENST00000339865 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
USP47-202ENST00000339865 Q5VSD8 79 aa8.63□□□□□ -1.03
USP47-202ENST00000339865 C16orf95Q9H693 158 aa8.62□□□□□ -1.03
USP47-202ENST00000339865 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
USP47-202ENST00000339865 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
USP47-202ENST00000339865 CAMK2N1Q7Z7J9 78 aa8.61□□□□□ -1.03
USP47-202ENST00000339865 Q8N1X5 172 aa8.61□□□□□ -1.03
USP47-202ENST00000339865 DMBT1Q9UGM3 2413 aaPredicted RBP8.6□□□□□ -1.03
USP47-202ENST00000339865 IGFL1Q6UW32 110 aa8.6□□□□□ -1.03
USP47-202ENST00000339865 LAMA2P24043 3122 aaKnown RBP8.6□□□□□ -1.03
USP47-202ENST00000339865 XIRP2A4UGR9 3374 aa8.59□□□□□ -1.03
USP47-202ENST00000339865 NBDYA0A0U1RRE5 68 aa8.59□□□□□ -1.03
USP47-202ENST00000339865 STAB1Q9NY15 2570 aa8.58□□□□□ -1.04
USP47-202ENST00000339865 CFAP54Q96N23 3096 aa8.58□□□□□ -1.04
USP47-202ENST00000339865 MUC22E2RYF6 1773 aaPredicted RBP8.57□□□□□ -1.04
USP47-202ENST00000339865 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
USP47-202ENST00000339865 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
USP47-202ENST00000339865 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
USP47-202ENST00000339865 MGAM2Q2M2H8 2515 aa8.56□□□□□ -1.04
USP47-202ENST00000339865 ATRQ13535 2644 aa8.55□□□□□ -1.04
USP47-202ENST00000339865 Q6ZSA8 131 aa8.55□□□□□ -1.04
USP47-202ENST00000339865 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
USP47-202ENST00000339865 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
USP47-202ENST00000339865 CFAP46Q8IYW2 2715 aa8.52□□□□□ -1.04
USP47-202ENST00000339865 LINC00588Q9Y4M8 146 aa8.52□□□□□ -1.05
USP47-202ENST00000339865 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
USP47-202ENST00000339865 Q8N377 158 aa8.52□□□□□ -1.05
USP47-202ENST00000339865 H3BNG1 76 aa8.51□□□□□ -1.05
USP47-202ENST00000339865 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
USP47-202ENST00000339865 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
USP47-202ENST00000339865 MAST4O15021 2626 aa8.49□□□□□ -1.05
USP47-202ENST00000339865 CEP295Q9C0D2 2601 aa8.49□□□□□ -1.05
USP47-202ENST00000339865 LITAFQ99732 161 aa8.48□□□□□ -1.05
USP47-202ENST00000339865 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
USP47-202ENST00000339865 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
USP47-202ENST00000339865 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
USP47-202ENST00000339865 FREM2Q5SZK8 3169 aa8.47□□□□□ -1.05
USP47-202ENST00000339865 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
USP47-202ENST00000339865 REV3LO60673 3130 aa8.47□□□□□ -1.05
USP47-202ENST00000339865 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.05
USP47-202ENST00000339865 A0A1B0GU33 70 aa8.46□□□□□ -1.06
USP47-202ENST00000339865 CSAG1Q6PB30 78 aa8.46□□□□□ -1.06
USP47-202ENST00000339865 NBEAL1Q6ZS30 2694 aa8.45□□□□□ -1.06
USP47-202ENST00000339865 ZNF861PO60384 105 aa8.45□□□□□ -1.06
USP47-202ENST00000339865 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
USP47-202ENST00000339865 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
USP47-202ENST00000339865 SPINK7P58062 85 aa8.41□□□□□ -1.06
USP47-202ENST00000339865 A0A1W2PPR1 153 aa8.41□□□□□ -1.06
USP47-202ENST00000339865 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
USP47-202ENST00000339865 Q8NAQ8 132 aa8.4□□□□□ -1.06
USP47-202ENST00000339865 CENPEQ02224 2701 aa8.4□□□□□ -1.06
USP47-202ENST00000339865 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
USP47-202ENST00000339865 C15orf56Q8N910 161 aa8.38□□□□□ -1.07
USP47-202ENST00000339865 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
USP47-202ENST00000339865 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
USP47-202ENST00000339865 Q75L30 129 aa8.37□□□□□ -1.07
USP47-202ENST00000339865 A0A0C4DFX4 3053 aa8.37□□□□□ -1.07
USP47-202ENST00000339865 BAHCC1Q9P281 2608 aa8.34□□□□□ -1.07
USP47-202ENST00000339865 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
USP47-202ENST00000339865 IGLV7-46A0A075B6I9 117 aa8.33□□□□□ -1.08
USP47-202ENST00000339865 STAB2Q8WWQ8 2551 aa8.33□□□□□ -1.08
USP47-202ENST00000339865 ITPR3Q14573 2671 aa8.31□□□□□ -1.08
USP47-202ENST00000339865 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
USP47-202ENST00000339865 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
USP47-202ENST00000339865 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
USP47-202ENST00000339865 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
USP47-202ENST00000339865 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
USP47-202ENST00000339865 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
USP47-202ENST00000339865 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
USP47-202ENST00000339865 HRES1P13985 223 aa8.26□□□□□ -1.09
USP47-202ENST00000339865 DNAH14Q0VDD8 3507 aa8.25□□□□□ -1.09
USP47-202ENST00000339865 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
USP47-202ENST00000339865 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
USP47-202ENST00000339865 H1FX-AS1Q4G0G2 97 aa8.23□□□□□ -1.09
USP47-202ENST00000339865 K7EIL1 84 aa8.22□□□□□ -1.09
USP47-202ENST00000339865 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
USP47-202ENST00000339865 A0A087WTM6 91 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms