RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CASC10Q5T4H9 136 aa10.65□□□□□ -0.71
LITAF-201ENST00000339430 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
LITAF-201ENST00000339430 TGP01266 2768 aa10.64□□□□□ -0.71
LITAF-201ENST00000339430 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
LITAF-201ENST00000339430 TRBV7-6A0A0J9YX20 115 aa10.63□□□□□ -0.71
LITAF-201ENST00000339430 ATP5EP2Q5VTU8 51 aa10.62□□□□□ -0.71
LITAF-201ENST00000339430 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
LITAF-201ENST00000339430 H3BQ85 93 aa10.61□□□□□ -0.71
LITAF-201ENST00000339430 LYSTQ99698 3801 aa10.61□□□□□ -0.71
LITAF-201ENST00000339430 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
LITAF-201ENST00000339430 TENM2Q9NT68 2774 aa10.61□□□□□ -0.71
LITAF-201ENST00000339430 NUPR2A6NF83 97 aa10.61□□□□□ -0.71
LITAF-201ENST00000339430 HAMPP81172 84 aa10.6□□□□□ -0.71
LITAF-201ENST00000339430 Q6ZVQ6 151 aa10.6□□□□□ -0.71
LITAF-201ENST00000339430 UPK3BQ9BT76 320 aa10.6□□□□□ -0.71
LITAF-201ENST00000339430 F8WDY8 70 aa10.59□□□□□ -0.71
LITAF-201ENST00000339430 C7orf33Q8WU49 177 aa10.59□□□□□ -0.71
LITAF-201ENST00000339430 FAM168BA1KXE4 195 aa10.59□□□□□ -0.71
LITAF-201ENST00000339430 TRBV7-4A0A0J9YYF1 115 aa10.58□□□□□ -0.72
LITAF-201ENST00000339430 RPL37AP8A6NKH3 93 aa10.58□□□□□ -0.72
LITAF-201ENST00000339430 PDE6GP18545 87 aa10.58□□□□□ -0.72
LITAF-201ENST00000339430 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
LITAF-201ENST00000339430 SERP2Q8N6R1 65 aa10.58□□□□□ -0.72
LITAF-201ENST00000339430 CYSTM1Q9H1C7 97 aa10.58□□□□□ -0.72
LITAF-201ENST00000339430 SMIM20Q8N5G0 67 aa10.57□□□□□ -0.72
LITAF-201ENST00000339430 GHRHP01286 108 aa10.57□□□□□ -0.72
LITAF-201ENST00000339430 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
LITAF-201ENST00000339430 DNAH7Q8WXX0 4024 aa10.56□□□□□ -0.72
LITAF-201ENST00000339430 CRYGAP11844 174 aa10.55□□□□□ -0.72
LITAF-201ENST00000339430 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
LITAF-201ENST00000339430 DNAH10Q8IVF4 4471 aa10.55□□□□□ -0.72
LITAF-201ENST00000339430 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
LITAF-201ENST00000339430 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
LITAF-201ENST00000339430 DYNC2H1Q8NCM8 4307 aaKnown RBP10.54□□□□□ -0.72
LITAF-201ENST00000339430 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
LITAF-201ENST00000339430 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
LITAF-201ENST00000339430 KRTAP7-1Q8IUC3 87 aa10.5□□□□□ -0.73
LITAF-201ENST00000339430 FAM19A5Q7Z5A7 132 aaPredicted RBP10.5□□□□□ -0.73
LITAF-201ENST00000339430 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
LITAF-201ENST00000339430 RMI2Q96E14 147 aa10.49□□□□□ -0.73
LITAF-201ENST00000339430 Q8N377 158 aa10.48□□□□□ -0.73
LITAF-201ENST00000339430 PLA2G2DQ9UNK4 145 aa10.48□□□□□ -0.73
LITAF-201ENST00000339430 IGLV1-50A0A075B6I6 118 aa10.47□□□□□ -0.73
LITAF-201ENST00000339430 Q9BRP9 147 aa10.47□□□□□ -0.73
LITAF-201ENST00000339430 CXCL6P80162 114 aa10.47□□□□□ -0.73
LITAF-201ENST00000339430 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
LITAF-201ENST00000339430 Q6ZRX8 168 aa10.46□□□□□ -0.73
LITAF-201ENST00000339430 SVIPQ8NHG7 77 aa10.46□□□□□ -0.73
LITAF-201ENST00000339430 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.74
LITAF-201ENST00000339430 KRTAP1-5Q9BYS1 174 aa10.45□□□□□ -0.74
LITAF-201ENST00000339430 KRTAP4-16G5E9R7 235 aaPredicted RBP10.45□□□□□ -0.74
LITAF-201ENST00000339430 C3orf84H3BNL1 204 aa10.45□□□□□ -0.74
LITAF-201ENST00000339430 PRYO14603 147 aa10.44□□□□□ -0.74
LITAF-201ENST00000339430 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
LITAF-201ENST00000339430 IGLV5-37A0A075B6J1 123 aa10.44□□□□□ -0.74
LITAF-201ENST00000339430 MRPL55Q7Z7F7 128 aaKnown RBP10.44□□□□□ -0.74
LITAF-201ENST00000339430 LOC107984640A0A0U1RRK4 108 aa10.43□□□□□ -0.74
LITAF-201ENST00000339430 DHRS4-AS1Q9P1J3 65 aa10.43□□□□□ -0.74
LITAF-201ENST00000339430 SPRR1AP35321 89 aa10.41□□□□□ -0.74
LITAF-201ENST00000339430 Q8N9L7 120 aa10.41□□□□□ -0.74
LITAF-201ENST00000339430 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
LITAF-201ENST00000339430 ERC2-IT1O76042 136 aa10.4□□□□□ -0.74
LITAF-201ENST00000339430 UBE2BP63146 152 aa10.39□□□□□ -0.75
LITAF-201ENST00000339430 NREPQ16612 68 aa10.39□□□□□ -0.75
LITAF-201ENST00000339430 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
LITAF-201ENST00000339430 IGLV5-48A0A075B6I7 105 aa10.38□□□□□ -0.75
LITAF-201ENST00000339430 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
LITAF-201ENST00000339430 TRAV7A0A075B6U4 112 aa10.37□□□□□ -0.75
LITAF-201ENST00000339430 PSCAO43653 123 aa10.37□□□□□ -0.75
LITAF-201ENST00000339430 TMEM258P61165 79 aa10.37□□□□□ -0.75
LITAF-201ENST00000339430 A0A096LNI7 61 aa10.36□□□□□ -0.75
LITAF-201ENST00000339430 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
LITAF-201ENST00000339430 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
LITAF-201ENST00000339430 BPY2O14599 106 aa10.34□□□□□ -0.75
LITAF-201ENST00000339430 A0A1W2PNM2 257 aa10.34□□□□□ -0.75
LITAF-201ENST00000339430 C1orf137Q5JT78 98 aa10.34□□□□□ -0.75
LITAF-201ENST00000339430 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 BCE1O60756 84 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 LY6G6CO95867 125 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 IGKV4-1P06312 121 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
LITAF-201ENST00000339430 TNP2Q05952 138 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 J3KT08 172 aa10.32□□□□□ -0.76
LITAF-201ENST00000339430 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
LITAF-201ENST00000339430 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
LITAF-201ENST00000339430 PRLHP81277 87 aa10.3□□□□□ -0.76
LITAF-201ENST00000339430 DPH3Q96FX2 82 aa10.3□□□□□ -0.76
LITAF-201ENST00000339430 C16orf90A8MZG2 172 aa10.3□□□□□ -0.76
LITAF-201ENST00000339430 A0A0G2JQZ4 141 aa10.29□□□□□ -0.76
LITAF-201ENST00000339430 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
LITAF-201ENST00000339430 CNBPP62633 177 aaKnown RBP10.28□□□□□ -0.76
LITAF-201ENST00000339430 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
LITAF-201ENST00000339430 Q8NBF4 154 aa10.28□□□□□ -0.76
LITAF-201ENST00000339430 SMIM29Q86T20 159 aa10.26□□□□□ -0.77
LITAF-201ENST00000339430 Q6ZR54 194 aa10.26□□□□□ -0.77
LITAF-201ENST00000339430 KMT2AQ03164 3969 aa10.25□□□□□ -0.77
LITAF-201ENST00000339430 HIGD2AQ9BW72 106 aa10.25□□□□□ -0.77
LITAF-201ENST00000339430 Q6ZRN7 208 aaPredicted RBP10.25□□□□□ -0.77
LITAF-201ENST00000339430 H7BZZ5 65 aa10.24□□□□□ -0.77
LITAF-201ENST00000339430 OXTP01178 125 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms