RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 HIGD2BQ4VC39 106 aa13.5□□□□□ -0.25
RUNX3-202ENST00000338888 LINC00528Q8N1L1 170 aa13.5□□□□□ -0.25
RUNX3-202ENST00000338888 PRR34Q9NV39 138 aa13.5□□□□□ -0.25
RUNX3-202ENST00000338888 LELP1Q5T871 98 aa13.48□□□□□ -0.25
RUNX3-202ENST00000338888 KRTAP10-3P60369 221 aa13.48□□□□□ -0.25
RUNX3-202ENST00000338888 M0R378 163 aa13.47□□□□□ -0.25
RUNX3-202ENST00000338888 CELA1Q9UNI1 258 aa13.47□□□□□ -0.25
RUNX3-202ENST00000338888 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
RUNX3-202ENST00000338888 C1orf195Q5TG92 126 aa13.46□□□□□ -0.25
RUNX3-202ENST00000338888 DEFB105AQ8NG35 78 aa13.46□□□□□ -0.25
RUNX3-202ENST00000338888 FAM30AQ9NZY2 134 aa13.45□□□□□ -0.26
RUNX3-202ENST00000338888 SMIM29Q86T20 159 aa13.43□□□□□ -0.26
RUNX3-202ENST00000338888 LRCOL1A6NCL2 159 aa13.41□□□□□ -0.26
RUNX3-202ENST00000338888 TENM1Q9UKZ4 2725 aa13.41□□□□□ -0.26
RUNX3-202ENST00000338888 Q6ZRU5 148 aa13.41□□□□□ -0.26
RUNX3-202ENST00000338888 VWFP04275 2813 aa13.4□□□□□ -0.26
RUNX3-202ENST00000338888 F8WDY8 70 aa13.38□□□□□ -0.27
RUNX3-202ENST00000338888 EGFEM1PQ0D2K5 195 aa13.38□□□□□ -0.27
RUNX3-202ENST00000338888 ATRQ13535 2644 aa13.38□□□□□ -0.27
RUNX3-202ENST00000338888 F8P00451 2351 aa13.37□□□□□ -0.27
RUNX3-202ENST00000338888 Q8N377 158 aa13.37□□□□□ -0.27
RUNX3-202ENST00000338888 KPRPQ5T749 579 aaPredicted RBP13.36□□□□□ -0.27
RUNX3-202ENST00000338888 V9GYY9 64 aa13.35□□□□□ -0.27
RUNX3-202ENST00000338888 hDV103S1A0JD37 113 aa13.34□□□□□ -0.27
RUNX3-202ENST00000338888 Q6ZRP5 223 aa13.33□□□□□ -0.28
RUNX3-202ENST00000338888 Q8NAQ8 132 aa13.33□□□□□ -0.28
RUNX3-202ENST00000338888 IGLV5-48A0A075B6I7 105 aa13.31□□□□□ -0.28
RUNX3-202ENST00000338888 SPART-AS1P0CW21 52 aa13.31□□□□□ -0.28
RUNX3-202ENST00000338888 A0A1W2PNM2 257 aa13.3□□□□□ -0.28
RUNX3-202ENST00000338888 WFDC10BQ8IUB3 73 aa13.3□□□□□ -0.28
RUNX3-202ENST00000338888 C1orf64Q8NEQ6 169 aa13.3□□□□□ -0.28
RUNX3-202ENST00000338888 TEP1Q99973 2627 aaKnown RBP13.3□□□□□ -0.28
RUNX3-202ENST00000338888 C15orf56Q8N910 161 aa13.29□□□□□ -0.28
RUNX3-202ENST00000338888 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
RUNX3-202ENST00000338888 APOC4P55056 127 aa13.27□□□□□ -0.28
RUNX3-202ENST00000338888 LCE6AA0A183 80 aa13.27□□□□□ -0.29
RUNX3-202ENST00000338888 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
RUNX3-202ENST00000338888 KCNQ1DNQ9H478 68 aa13.26□□□□□ -0.29
RUNX3-202ENST00000338888 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
RUNX3-202ENST00000338888 SERTAD4-AS1Q5TG53 156 aa13.25□□□□□ -0.29
RUNX3-202ENST00000338888 C7orf33Q8WU49 177 aa13.25□□□□□ -0.29
RUNX3-202ENST00000338888 PRR4Q16378 134 aa13.24□□□□□ -0.29
RUNX3-202ENST00000338888 C1orf137Q5JT78 98 aa13.24□□□□□ -0.29
RUNX3-202ENST00000338888 SEC61GP60059 68 aa13.24□□□□□ -0.29
RUNX3-202ENST00000338888 ZCCHC13Q8WW36 166 aaKnown RBP13.23□□□□□ -0.29
RUNX3-202ENST00000338888 ETDCA0A1B0GVM5 59 aa13.22□□□□□ -0.29
RUNX3-202ENST00000338888 DSCR10P59022 87 aa13.22□□□□□ -0.29
RUNX3-202ENST00000338888 Q1T7F1 81 aa13.22□□□□□ -0.29
RUNX3-202ENST00000338888 K7EQZ3 153 aa13.22□□□□□ -0.29
RUNX3-202ENST00000338888 PSPHP1O15172 72 aa13.22□□□□□ -0.29
RUNX3-202ENST00000338888 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.21□□□□□ -0.3
RUNX3-202ENST00000338888 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.3
RUNX3-202ENST00000338888 ST20-AS1Q8NBB2 130 aa13.21□□□□□ -0.3
RUNX3-202ENST00000338888 Q8NBF4 154 aa13.19□□□□□ -0.3
RUNX3-202ENST00000338888 Q9BRP9 147 aa13.19□□□□□ -0.3
RUNX3-202ENST00000338888 PRR15Q8IV56 129 aa13.19□□□□□ -0.3
RUNX3-202ENST00000338888 A0A1B0GW54 56 aa13.18□□□□□ -0.3
RUNX3-202ENST00000338888 PRB2P02812 416 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-202ENST00000338888 SYCNQ0VAF6 134 aa13.18□□□□□ -0.3
RUNX3-202ENST00000338888 TNP2Q05952 138 aa13.17□□□□□ -0.3
RUNX3-202ENST00000338888 Q6ZRX8 168 aa13.17□□□□□ -0.3
RUNX3-202ENST00000338888 DHRS4-AS1Q9P1J3 65 aa13.17□□□□□ -0.3
RUNX3-202ENST00000338888 IGKV2D-24A0A075B6R9 120 aa13.15□□□□□ -0.3
RUNX3-202ENST00000338888 TRAV22A0A0B4J277 110 aa13.14□□□□□ -0.31
RUNX3-202ENST00000338888 SPRR4Q96PI1 79 aa13.13□□□□□ -0.31
RUNX3-202ENST00000338888 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
RUNX3-202ENST00000338888 FAM168BA1KXE4 195 aa13.11□□□□□ -0.31
RUNX3-202ENST00000338888 HCG22E2RYF7 251 aa13.1□□□□□ -0.31
RUNX3-202ENST00000338888 KRTAP4-16G5E9R7 235 aaPredicted RBP13.1□□□□□ -0.31
RUNX3-202ENST00000338888 PMAIP1Q13794 54 aa13.1□□□□□ -0.31
RUNX3-202ENST00000338888 CYP4F30PQ9H0H9 118 aa13.09□□□□□ -0.31
RUNX3-202ENST00000338888 A0A0G2JQZ4 141 aa13.09□□□□□ -0.31
RUNX3-202ENST00000338888 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
RUNX3-202ENST00000338888 DEFB116Q30KQ4 102 aa13.09□□□□□ -0.31
RUNX3-202ENST00000338888 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.31
RUNX3-202ENST00000338888 STAB1Q9NY15 2570 aa13.08□□□□□ -0.32
RUNX3-202ENST00000338888 PSCAO43653 123 aa13.07□□□□□ -0.32
RUNX3-202ENST00000338888 IGLV1-50A0A075B6I6 118 aa13.07□□□□□ -0.32
RUNX3-202ENST00000338888 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
RUNX3-202ENST00000338888 A8MUN3 132 aa13.06□□□□□ -0.32
RUNX3-202ENST00000338888 WFDC13Q8IUB5 93 aa13.05□□□□□ -0.32
RUNX3-202ENST00000338888 PKD1L1Q8TDX9 2849 aa13.04□□□□□ -0.32
RUNX3-202ENST00000338888 SPRR1AP35321 89 aa13.04□□□□□ -0.32
RUNX3-202ENST00000338888 MAST4O15021 2626 aa13.03□□□□□ -0.32
RUNX3-202ENST00000338888 UBE2BP63146 152 aa13.03□□□□□ -0.32
RUNX3-202ENST00000338888 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
RUNX3-202ENST00000338888 LINC00476Q8WZB0 136 aa13.01□□□□□ -0.33
RUNX3-202ENST00000338888 RETNQ9HD89 108 aa13.01□□□□□ -0.33
RUNX3-202ENST00000338888 A8MU10 97 aa13□□□□□ -0.33
RUNX3-202ENST00000338888 NDUFB1O75438 58 aa13□□□□□ -0.33
RUNX3-202ENST00000338888 KRTAP7-1Q8IUC3 87 aa13□□□□□ -0.33
RUNX3-202ENST00000338888 LINC00208Q96KT6 92 aa12.99□□□□□ -0.33
RUNX3-202ENST00000338888 PLA2G2DQ9UNK4 145 aa12.99□□□□□ -0.33
RUNX3-202ENST00000338888 H3BNG1 76 aa12.98□□□□□ -0.33
RUNX3-202ENST00000338888 MP68P56378 58 aa12.98□□□□□ -0.33
RUNX3-202ENST00000338888 LINC01556Q5JQF7 62 aa12.97□□□□□ -0.33
RUNX3-202ENST00000338888 B9D2Q9BPU9 175 aa12.97□□□□□ -0.33
RUNX3-202ENST00000338888 TLX1NBP0CAT3 122 aa12.96□□□□□ -0.33
RUNX3-202ENST00000338888 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
RUNX3-202ENST00000338888 RPL37AP61513 92 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms