RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TRAV23DV6A0A075B6W5 121 aa7.17□□□□□ -1.26
RTN3-201ENST00000338850 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
RTN3-201ENST00000338850 Q8N3U1 123 aa7.17□□□□□ -1.26
RTN3-201ENST00000338850 KLK12Q9UKR0 248 aa7.17□□□□□ -1.26
RTN3-201ENST00000338850 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
RTN3-201ENST00000338850 ELOF1P60002 83 aaKnown RBP7.16□□□□□ -1.26
RTN3-201ENST00000338850 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
RTN3-201ENST00000338850 DEFB4AO15263 64 aa7.15□□□□□ -1.26
RTN3-201ENST00000338850 VPREB1P12018 145 aa7.15□□□□□ -1.26
RTN3-201ENST00000338850 C11orf45Q8TAV5 145 aa7.15□□□□□ -1.26
RTN3-201ENST00000338850 TRBV7-4A0A0J9YYF1 115 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 M0R378 163 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 COX7BP24311 80 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 TMEM258P61165 79 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 LINC01556Q5JQF7 62 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 SMIM20Q8N5G0 67 aa7.14□□□□□ -1.27
RTN3-201ENST00000338850 IGKV3D-7A0A0C4DH55 119 aa7.13□□□□□ -1.27
RTN3-201ENST00000338850 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
RTN3-201ENST00000338850 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
RTN3-201ENST00000338850 CXCL6P80162 114 aa7.13□□□□□ -1.27
RTN3-201ENST00000338850 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
RTN3-201ENST00000338850 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
RTN3-201ENST00000338850 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
RTN3-201ENST00000338850 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
RTN3-201ENST00000338850 A0A1B0GW54 56 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 TLX1NBP0CAT3 122 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 HTN3P15516 51 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 Q6ZQY7 126 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
RTN3-201ENST00000338850 VPS13DQ5THJ4 4388 aa7.1□□□□□ -1.27
RTN3-201ENST00000338850 LINC00528Q8N1L1 170 aa7.1□□□□□ -1.27
RTN3-201ENST00000338850 LAMTOR3Q9UHA4 124 aa7.1□□□□□ -1.27
RTN3-201ENST00000338850 APLNQ9ULZ1 77 aa7.1□□□□□ -1.27
RTN3-201ENST00000338850 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
RTN3-201ENST00000338850 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
RTN3-201ENST00000338850 C1orf43Q9BWL3 253 aa7.09□□□□□ -1.27
RTN3-201ENST00000338850 IGLV5-37A0A075B6J1 123 aa7.08□□□□□ -1.28
RTN3-201ENST00000338850 J3KT08 172 aa7.08□□□□□ -1.28
RTN3-201ENST00000338850 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
RTN3-201ENST00000338850 Q6ZTC4 211 aa7.08□□□□□ -1.28
RTN3-201ENST00000338850 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
RTN3-201ENST00000338850 A0A087WVE0 104 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 TRAV10A0A0B4J240 114 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 LOC107984640A0A0U1RRK4 108 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 Q6ZRU5 148 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 Q6ZVQ6 151 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 KCNQ1DNQ9H478 68 aa7.07□□□□□ -1.28
RTN3-201ENST00000338850 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
RTN3-201ENST00000338850 TRAV7A0A075B6U4 112 aa7.05□□□□□ -1.28
RTN3-201ENST00000338850 ESRGQ1W209 222 aa7.05□□□□□ -1.28
RTN3-201ENST00000338850 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
RTN3-201ENST00000338850 DNAH6Q9C0G6 4158 aa7.05□□□□□ -1.28
RTN3-201ENST00000338850 SYCNQ0VAF6 134 aa7.04□□□□□ -1.28
RTN3-201ENST00000338850 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
RTN3-201ENST00000338850 PRYO14603 147 aa7.03□□□□□ -1.28
RTN3-201ENST00000338850 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
RTN3-201ENST00000338850 HECTD4Q9Y4D8 3996 aa7.03□□□□□ -1.28
RTN3-201ENST00000338850 HERC2O95714 4834 aa7.03□□□□□ -1.28
RTN3-201ENST00000338850 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
RTN3-201ENST00000338850 RMI2Q96E14 147 aa7.02□□□□□ -1.29
RTN3-201ENST00000338850 IGLV5-48A0A075B6I7 105 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 LCE2BO14633 110 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 SPRR1AP35321 89 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 KLKP1Q107X0 134 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 Q6ZRP5 223 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 DHRS4-AS1Q9P1J3 65 aa7.01□□□□□ -1.29
RTN3-201ENST00000338850 KRTAP4-16G5E9R7 235 aaPredicted RBP6.99□□□□□ -1.29
RTN3-201ENST00000338850 M0R2N4 97 aa6.99□□□□□ -1.29
RTN3-201ENST00000338850 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
RTN3-201ENST00000338850 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
RTN3-201ENST00000338850 NDUFC1O43677 76 aa6.98□□□□□ -1.29
RTN3-201ENST00000338850 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
RTN3-201ENST00000338850 DNAH17Q9UFH2 4485 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 HAMPP81172 84 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 Q6ZRX8 168 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
RTN3-201ENST00000338850 A0A1B0GVY2 172 aa6.96□□□□□ -1.3
RTN3-201ENST00000338850 RTL8CO15255 209 aa6.96□□□□□ -1.3
RTN3-201ENST00000338850 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
RTN3-201ENST00000338850 TNP2Q05952 138 aa6.96□□□□□ -1.3
RTN3-201ENST00000338850 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.3
RTN3-201ENST00000338850 EPM2AB3EWF7 344 aa6.95□□□□□ -1.3
RTN3-201ENST00000338850 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
RTN3-201ENST00000338850 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
RTN3-201ENST00000338850 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
RTN3-201ENST00000338850 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
RTN3-201ENST00000338850 Q6ZR54 194 aa6.93□□□□□ -1.3
RTN3-201ENST00000338850 Q8N377 158 aa6.93□□□□□ -1.3
RTN3-201ENST00000338850 FAM236DA0A1B0GTK5 79 aa6.92□□□□□ -1.3
RTN3-201ENST00000338850 H7BZZ5 65 aa6.92□□□□□ -1.3
RTN3-201ENST00000338850 FAM236CP0DP71 79 aa6.92□□□□□ -1.3
RTN3-201ENST00000338850 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
RTN3-201ENST00000338850 SPRR4Q96PI1 79 aa6.92□□□□□ -1.3
RTN3-201ENST00000338850 LINC00588Q9Y4M8 146 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms