RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
SNCA-201ENST00000336904 MEGF8Q7Z7M0 2845 aa5.73□□□□□ -1.49
SNCA-201ENST00000336904 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
SNCA-201ENST00000336904 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
SNCA-201ENST00000336904 HAMPP81172 84 aa5.73□□□□□ -1.49
SNCA-201ENST00000336904 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
SNCA-201ENST00000336904 JMJD7-PLA2G4BH0Y9G9 81 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 Q6ZQT0 140 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 ST20-AS1Q8NBB2 130 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 PSCAO43653 123 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
SNCA-201ENST00000336904 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
SNCA-201ENST00000336904 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
SNCA-201ENST00000336904 PLECQ15149 4684 aaKnown RBP5.71□□□□□ -1.5
SNCA-201ENST00000336904 C3orf84H3BNL1 204 aa5.71□□□□□ -1.5
SNCA-201ENST00000336904 A0A1B0GX51 115 aa5.7□□□□□ -1.5
SNCA-201ENST00000336904 Q8N9L7 120 aa5.7□□□□□ -1.5
SNCA-201ENST00000336904 CYSTM1Q9H1C7 97 aa5.7□□□□□ -1.5
SNCA-201ENST00000336904 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 MUC7Q8TAX7 377 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 DNHD1Q96M86 4753 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 A0A096LNI7 61 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 Q6JHZ5 121 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 Q9BRP9 147 aa5.69□□□□□ -1.5
SNCA-201ENST00000336904 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
SNCA-201ENST00000336904 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
SNCA-201ENST00000336904 PRLHP81277 87 aa5.68□□□□□ -1.5
SNCA-201ENST00000336904 UBE2BP63146 152 aa5.67□□□□□ -1.5
SNCA-201ENST00000336904 C9orf153Q5TBE3 101 aa5.67□□□□□ -1.5
SNCA-201ENST00000336904 Q6ZVQ6 151 aa5.67□□□□□ -1.5
SNCA-201ENST00000336904 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
SNCA-201ENST00000336904 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
SNCA-201ENST00000336904 IMUPQ9GZP8 106 aa5.66□□□□□ -1.5
SNCA-201ENST00000336904 Q8N377 158 aa5.66□□□□□ -1.5
SNCA-201ENST00000336904 MRPL55Q7Z7F7 128 aaKnown RBP5.66□□□□□ -1.5
SNCA-201ENST00000336904 LINC01547P58512 204 aaPredicted RBP5.65□□□□□ -1.5
SNCA-201ENST00000336904 KCNQ1DNQ9H478 68 aa5.65□□□□□ -1.5
SNCA-201ENST00000336904 IGLV1-50A0A075B6I6 118 aa5.65□□□□□ -1.51
SNCA-201ENST00000336904 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.51
SNCA-201ENST00000336904 APLNQ9ULZ1 77 aa5.65□□□□□ -1.51
SNCA-201ENST00000336904 KMT2AQ03164 3969 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 Q6ZRX8 168 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 GHRHP01286 108 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
SNCA-201ENST00000336904 RMI2Q96E14 147 aa5.64□□□□□ -1.51
SNCA-201ENST00000336904 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
SNCA-201ENST00000336904 PANO1I0J062 215 aa5.63□□□□□ -1.51
SNCA-201ENST00000336904 DPH3Q96FX2 82 aa5.63□□□□□ -1.51
SNCA-201ENST00000336904 BPY2O14599 106 aa5.62□□□□□ -1.51
SNCA-201ENST00000336904 DEFB116Q30KQ4 102 aa5.61□□□□□ -1.51
SNCA-201ENST00000336904 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
SNCA-201ENST00000336904 TLX1NBP0CAT3 122 aa5.61□□□□□ -1.51
SNCA-201ENST00000336904 COX7CP15954 63 aa5.61□□□□□ -1.51
SNCA-201ENST00000336904 SMIM20Q8N5G0 67 aa5.61□□□□□ -1.51
SNCA-201ENST00000336904 ATOX1O00244 68 aa5.61□□□□□ -1.51
SNCA-201ENST00000336904 REG3GQ6UW15 175 aa5.6□□□□□ -1.51
SNCA-201ENST00000336904 TRBV7-6A0A0J9YX20 115 aa5.6□□□□□ -1.51
SNCA-201ENST00000336904 B9D2Q9BPU9 175 aa5.6□□□□□ -1.51
SNCA-201ENST00000336904 UQCRQO14949 82 aa5.59□□□□□ -1.51
SNCA-201ENST00000336904 FBN3Q75N90 2809 aa5.59□□□□□ -1.52
SNCA-201ENST00000336904 PRYO14603 147 aa5.58□□□□□ -1.52
SNCA-201ENST00000336904 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
SNCA-201ENST00000336904 A0A1W2PNM2 257 aa5.58□□□□□ -1.52
SNCA-201ENST00000336904 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
SNCA-201ENST00000336904 SNURFQ9Y675 71 aa5.58□□□□□ -1.52
SNCA-201ENST00000336904 NREPQ16612 68 aa5.57□□□□□ -1.52
SNCA-201ENST00000336904 NBDYA0A0U1RRE5 68 aa5.57□□□□□ -1.52
SNCA-201ENST00000336904 SERP2Q8N6R1 65 aa5.57□□□□□ -1.52
SNCA-201ENST00000336904 C16orf90A8MZG2 172 aa5.56□□□□□ -1.52
SNCA-201ENST00000336904 SPRR1AP35321 89 aa5.56□□□□□ -1.52
SNCA-201ENST00000336904 DHRS4-AS1Q9P1J3 65 aa5.56□□□□□ -1.52
SNCA-201ENST00000336904 FRAS1Q86XX4 4008 aa5.56□□□□□ -1.52
SNCA-201ENST00000336904 F8WDY8 70 aa5.56□□□□□ -1.52
SNCA-201ENST00000336904 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
SNCA-201ENST00000336904 IGLV5-37A0A075B6J1 123 aa5.55□□□□□ -1.52
SNCA-201ENST00000336904 LRCOL1A6NCL2 159 aa5.55□□□□□ -1.52
SNCA-201ENST00000336904 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
SNCA-201ENST00000336904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.55□□□□□ -1.52
SNCA-201ENST00000336904 PDE6GP18545 87 aa5.54□□□□□ -1.52
SNCA-201ENST00000336904 LINC00476Q8WZB0 136 aa5.54□□□□□ -1.52
SNCA-201ENST00000336904 EPM2AB3EWF7 344 aa5.53□□□□□ -1.52
SNCA-201ENST00000336904 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
SNCA-201ENST00000336904 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
SNCA-201ENST00000336904 DNAH2Q9P225 4427 aa5.53□□□□□ -1.52
SNCA-201ENST00000336904 DYNC2H1Q8NCM8 4307 aaKnown RBP5.53□□□□□ -1.52
SNCA-201ENST00000336904 IGLV5-48A0A075B6I7 105 aa5.52□□□□□ -1.53
SNCA-201ENST00000336904 IGKV4-1P06312 121 aa5.52□□□□□ -1.53
SNCA-201ENST00000336904 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
SNCA-201ENST00000336904 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
SNCA-201ENST00000336904 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
SNCA-201ENST00000336904 CRYGAP11844 174 aa5.51□□□□□ -1.53
SNCA-201ENST00000336904 UBE2AP49459 152 aa5.51□□□□□ -1.53
SNCA-201ENST00000336904 RPL37AP61513 92 aaKnown RBP5.51□□□□□ -1.53
SNCA-201ENST00000336904 TNP2Q05952 138 aa5.51□□□□□ -1.53
SNCA-201ENST00000336904 IGFL1Q6UW32 110 aa5.51□□□□□ -1.53
SNCA-201ENST00000336904 ANAPC11Q9NYG5 84 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms